Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G00631 Aquilegia oxysepala HOM05D007882 ORTHO05D009870 4.1e-92 341.3 160 100.0
Cfa000524 Carpinus fangiana HOM05D007882 ORTHO05D009870 2.1e-59 232.6 151 69.5
Haze_06385 Corylus avellana HOM05D007882 ORTHO05D009870 7.8e-59 230.7 151 68.9
Nn1g06425 Nelumbo nucifera HOM05D007882 ORTHO05D009870 1.0e-58 230.3 153 68.0
TWI38G0780 Tripterygium wilfordii HOM05D007882 ORTHO05D009870 9.5e-57 223.8 156 67.3
Potri.004G048400 Populus trichocarpa HOM05D007882 ORTHO05D009870 1.2e-56 223.4 155 68.4
Atru.chr10.1801 Acer truncatum HOM05D007882 ORTHO05D009870 2.1e-56 222.6 156 67.9
Prupe.4G052300 Prunus persica HOM05D007882 ORTHO05D009870 3.6e-56 221.9 149 67.1
Manes.17G049100 Manihot esculenta HOM05D007882 ORTHO05D009870 8.1e-56 220.7 155 66.5
CSS0041544 Camellia sinensis var. sinensis HOM05D007882 ORTHO05D009870 1.8e-55 219.5 152 67.8
TAR627G1093 Trochodendron aralioides HOM05D007882 ORTHO05D009870 3.1e-55 218.8 150 69.3
QL05p042203 Quercus lobata HOM05D007882 ORTHO05D009870 4.0e-55 218.4 154 68.2
Sabra04G0030400 Salix brachista HOM05D007882 ORTHO05D009870 5.2e-55 218.0 155 67.1
Duzib235G1325 Durio zibethinus HOM05D007882 ORTHO05D009870 1.5e-54 216.5 156 66.0
PSO210G4689 Papaver somniferum HOM05D007882 ORTHO05D009870 2.6e-54 215.7 157 64.3
PSO210G1466 Papaver somniferum HOM05D007882 ORTHO05D009870 9.9e-54 213.8 157 65.0
CiPaw.10G052500 Carya illinoinensis HOM05D007882 ORTHO05D009870 1.3e-53 213.4 151 65.6
Cc02_g13810 Coffea canephora HOM05D007882 ORTHO05D009870 1.3e-53 213.4 151 64.9
Gohir.A05G159200 Gossypium hirsutum HOM05D007882 ORTHO05D009870 1.3e-53 213.4 156 64.1
Nitab4.5_0004359g0010 Nicotiana tabacum HOM05D007882 ORTHO05D009870 3.7e-53 211.8 155 63.2
Manes.16G031800 Manihot esculenta HOM05D007882 ORTHO05D009870 4.9e-53 211.5 152 65.1
COL.COLO4_31420 Corchorus olitorius HOM05D007882 ORTHO05D009870 1.1e-52 210.3 156 64.7
FvH4_3g08670 Fragaria vesca HOM05D007882 ORTHO05D009870 1.9e-52 209.5 149 66.4
Ciclev10017073m.g Citrus clementina HOM05D007882 ORTHO05D009870 3.2e-52 208.8 149 63.8
Gorai.009G166900 Gossypium raimondii HOM05D007882 ORTHO05D009870 3.2e-52 208.8 152 64.5
CAN.G529.52 Capsicum annuum HOM05D007882 ORTHO05D009870 5.4e-52 208.0 155 60.6
FAN21G3311 Fragaria x ananassa HOM05D001455 ORTHO05D001587 7.1e-52 207.6 149 65.8
FAN16G0532 Fragaria x ananassa HOM05D007882 ORTHO05D009870 1.2e-51 206.8 149 65.1
FAN11G2645 Fragaria x ananassa HOM05D007882 ORTHO05D009870 1.6e-51 206.5 149 65.1
Medtr2g014430 Medicago truncatula HOM05D007882 ORTHO05D009870 2.1e-51 206.1 149 65.1
CANSAT35G1953 Cannabis sativa HOM05D007882 ORTHO05D009870 2.7e-51 205.7 149 65.8
RcHm_v2.0_Chr5g0009121 Rosa chinensis HOM05D007882 ORTHO05D009870 2.7e-51 205.7 150 65.3
Thecc.06G181400 Theobroma cacao HOM05D007882 ORTHO05D009870 7.8e-51 204.1 156 60.9
arahy.Tifrunner.gnm1.ann1.CPZJ30 Arachis hypogaea HOM05D007882 ORTHO05D009870 1.7e-50 203.0 154 62.3
TPR.G789 Trifolium pratense HOM05D007882 ORTHO05D009870 2.3e-50 202.6 149 63.1
MD10G1289500 Malus domestica HOM05D007882 ORTHO05D009870 5.1e-50 201.4 148 62.8
Oeu012151.1 Olea europaea HOM05D007882 ORTHO05D009870 5.1e-50 201.4 152 61.2
Lalb_Chr18g0059401 Lupinus albus HOM05D007882 ORTHO05D009870 6.6e-50 201.1 150 62.7
Eucgr.D00598 Eucalyptus grandis HOM05D007882 ORTHO05D009870 1.9e-49 199.5 154 61.0
Lj6g0021640 Lotus japonicus HOM05D007882 ORTHO05D009870 1.9e-49 199.5 153 60.1
Rhsim02G0134400 Rhododendron simsii HOM05D007882 ORTHO05D009870 2.5e-49 199.1 148 62.8
THA.LOC104820567 Tarenaya hassleriana HOM05D007882 ORTHO05D009870 3.3e-49 198.7 150 63.3
PGR004G2459 Punica granatum HOM05D007882 ORTHO05D009870 9.5e-49 197.2 151 64.2
Aa31LG9G13760 Aethionema arabicum HOM05D007882 ORTHO05D009870 1.6e-48 196.4 150 62.0
MELO3C007262.2 Cucumis melo HOM05D007882 ORTHO05D009870 1.6e-48 196.4 158 59.5
Gohir.D05G161900 Gossypium hirsutum HOM05D007882 ORTHO05D009870 3.6e-48 195.3 146 63.0
Psat1g202760 Pisum sativum HOM05D007882 ORTHO05D009870 1.1e-47 193.7 149 61.1
ClCG00G004760 Citrullus lanatus HOM05D007882 ORTHO05D009870 2.4e-47 192.6 156 58.3
ClCG01G023240 Citrullus lanatus HOM05D007882 ORTHO05D009870 2.4e-47 192.6 156 58.3
BolC4t27817H Brassica oleracea HOM05D007882 ORTHO05D009870 4.0e-47 191.8 151 61.6
A04p26080 Brassica napus HOM05D007882 ORTHO05D009870 6.8e-47 191.0 151 61.6
BraA04t18110Z Brassica rapa HOM05D007882 ORTHO05D009870 6.8e-47 191.0 151 61.6
C04p63420 Brassica napus HOM05D007882 ORTHO05D009870 1.2e-46 190.3 151 60.9
Sp4g16270 Schrenkiella parvula HOM05D007882 ORTHO05D009870 1.5e-46 189.9 151 61.6
Sed0022369 Sechium edule HOM05D007882 ORTHO05D009870 1.5e-46 189.9 156 61.5
HanXRQChr01g0014401 Helianthus annuus HOM05D007882 ORTHO05D009870 2.0e-46 189.5 150 60.0
Migut.M01110 Erythranthe guttata HOM05D007882 ORTHO05D009870 5.8e-46 188.0 153 58.2
Thhalv10017644m.g Eutrema salsugineum HOM05D007882 ORTHO05D009870 7.6e-46 187.6 150 60.7
Solyc02g077700.1 Solanum lycopersicum HOM05D007882 ORTHO05D009870 2.9e-45 185.7 149 55.7
SalBow8G2967 Salvia bowleyana HOM05D007882 ORTHO05D009870 3.8e-45 185.3 154 56.5
SalBow8G3626 Salvia bowleyana HOM05D007882 ORTHO05D009870 3.8e-45 185.3 154 56.5
ATR0789G148 Amborella trichopoda HOM05D007882 ORTHO05D009870 6.4e-45 184.5 150 57.3
CARHR128020 Cardamine hirsuta HOM05D007882 ORTHO05D009870 1.4e-44 183.3 150 58.0
unitig_22.g6219 Utricularia gibba HOM05D007882 ORTHO05D009870 1.9e-44 183.0 152 58.6
Phvul.006G182500 Phaseolus vulgaris HOM05D007882 ORTHO05D009870 5.4e-44 181.4 153 57.5
PGSC0003DMG400031764 Solanum tuberosum HOM05D007882 ORTHO05D009870 5.4e-44 181.4 149 54.4
Glyma.13G235900 Glycine max HOM05D007882 ORTHO05D009870 9.2e-44 180.6 153 56.9
SGA_v2.0_scaffold22G09668 Striga asiatica HOM05D007882 ORTHO05D009870 4.6e-43 178.3 154 53.2
AL4G29660 Arabidopsis lyrata HOM05D007882 ORTHO05D009870 6.0e-43 177.9 150 58.0
Carub.0004s1556 Capsella rubella HOM05D007882 ORTHO05D009870 7.8e-43 177.6 150 58.0
DCAR_028056 Daucus carota HOM05D007882 ORTHO05D009870 1.5e-41 173.3 156 55.8
Dinv40598 Davidia involucrata HOM05D007882 ORTHO05D009870 1.9e-41 172.9 119 66.4
AT2G33855 Arabidopsis thaliana HOM05D007882 ORTHO05D009870 3.3e-41 172.2 150 57.3
CsaV3_6G050400 Cucumis sativus L. HOM05D007882 ORTHO05D009870 3.8e-37 158.7 128 60.9
Nitab4.5_0001955g0180 Nicotiana tabacum HOM05D007882 ORTHO05D009870 6.4e-37 157.9 114 63.2
Lsat_1_v5_gn_4_51820 Lactuca sativa HOM05D000216 ORTHO05D009870 5.4e-36 154.8 125 59.2
MBI04_g06226_MAGBIO Magnolia biondii HOM05D007882 ORTHO05D009870 2.7e-35 152.5 155 48.4
Ah.14g089690 Amaranthus hybridus HOM05D007882 ORTHO05D009870 9.6e-33 144.1 120 58.3
HPP92_022798 Vanilla planifolia HOM05D007882 ORTHO05D009870 4.9e-29 131.7 138 43.5
Nn1g04229 Nelumbo nucifera HOM05D007882 ORTHO05D009870 5.4e-28 128.3 103 60.2
QL06p028733 Quercus lobata HOM05D007882 ORTHO05D009870 9.9e-22 107.5 97 61.9
Os04g0475300 Oryza sativa ssp. japonica HOM05D007882 ORTHO05D009870 1.2e-19 100.5 153 35.9
Zm00001eb079820 Zea mays HOM05D007882 ORTHO05D009870 6.7e-18 94.7 122 40.2
Sc17g0005950 Simmondsia chinensis HOM05D007447 ORTHO05D009372 2.5e-12 76.3 65 58.5
BcaC02g07777 Brassica carinata HOM05D007882 ORTHO05D009870 5.7e-09 65.1 56 55.4
Cpa.g.sc27.7 Carica papaya HOM05D007882 ORTHO05D009870 1.4e-07 60.5 58 51.7
Mapoly0047s0088 Marchantia polymorpha HOM05D031660 ORTHO05D009870 1.8e-07 60.1 82 39.0
Pp3c24_16730 Physcomitrium patens HOM05D031660 ORTHO05D009870 2.4e-07 59.7 84 36.9


User provided reference genes

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