Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G00586 Aquilegia oxysepala HOM05D000847 ORTHO05D078118 3.6e-55 218.0 110 100.0
Aqoxy7G01631 Aquilegia oxysepala HOM05D000847 ORTHO05D007447 7.8e-18 94.0 47 97.9
AUR62016471 Chenopodium quinoa HOM05D000847 ORTHO05D007447 9.3e-11 70.5 47 66.0
Nn8g39141 Nelumbo nucifera HOM05D000847 ORTHO05D007447 3.5e-10 68.6 47 72.3
AUR62011643 Chenopodium quinoa HOM05D000847 ORTHO05D007447 6.0e-10 67.8 46 67.4
ATR0315G157 Amborella trichopoda HOM05D000847 ORTHO05D007447 1.7e-09 66.2 57 57.9
Atru.chr1.3326 Acer truncatum HOM05D000847 ORTHO05D007447 2.3e-09 65.9 47 63.8
Ah.01g021550 Amaranthus hybridus HOM05D000847 ORTHO05D007447 2.3e-09 65.9 47 66.0
Oeu033504.1 Olea europaea HOM05D000847 ORTHO05D007447 2.3e-09 65.9 47 68.1
TAR636G1233 Trochodendron aralioides HOM05D001241 ORTHO05D007447 2.3e-09 65.9 47 68.1
DCAR_007566 Daucus carota HOM05D000847 ORTHO05D007447 3.0e-09 65.5 47 63.8
THA.LOC104817984 Tarenaya hassleriana HOM05D000847 ORTHO05D007447 3.0e-09 65.5 51 60.8
TWI18G0861 Tripterygium wilfordii HOM05D000847 ORTHO05D007447 5.1e-09 64.7 47 61.7
Cc04_g03120 Coffea canephora HOM05D000847 ORTHO05D007447 6.6e-09 64.3 47 61.7
AL3G28770 Arabidopsis lyrata HOM05D000847 ORTHO05D007447 8.7e-09 63.9 70 52.9
PSO210G5089 Papaver somniferum HOM05D000847 ORTHO05D007447 8.7e-09 63.9 47 66.0
TAR624G1412 Trochodendron aralioides HOM05D000847 ORTHO05D007447 1.1e-08 63.5 46 67.4
Potri.001G183500 Populus trichocarpa HOM05D000847 ORTHO05D007447 1.9e-08 62.8 48 60.4
Sabra01G0144300 Salix brachista HOM05D000847 ORTHO05D007447 2.5e-08 62.4 48 58.3
EL10Ac9g22021 Beta vulgaris HOM05D000847 ORTHO05D007447 3.3e-08 62.0 47 59.6
CiPaw.02G149100 Carya illinoinensis HOM05D000847 ORTHO05D007447 3.3e-08 62.0 48 54.2
Nn2g11715 Nelumbo nucifera HOM05D000847 ORTHO05D007447 3.3e-08 62.0 47 68.1
Sc15g0001300 Simmondsia chinensis HOM05D000847 ORTHO05D007447 3.3e-08 62.0 47 59.6
Zm00001eb375710 Zea mays HOM05D000847 ORTHO05D007447 3.3e-08 62.0 47 63.8
ECA232G3820 Erigeron canadensis HOM05D000847 ORTHO05D007447 4.3e-08 61.6 47 57.4
CDE05G2545 Ceratophyllum demersum HOM05D000847 ORTHO05D007447 5.6e-08 61.2 47 61.7
Atru.chr1.4147 Acer truncatum HOM05D000847 ORTHO05D007447 7.3e-08 60.8 44 63.6
Actinidia32735 Actinidia chinensis HOM05D000847 ORTHO05D007447 7.3e-08 60.8 70 51.4
PGR102G2237 Punica granatum HOM05D000847 ORTHO05D007447 7.3e-08 60.8 47 59.6
PSO210G1204 Papaver somniferum HOM05D000847 ORTHO05D007447 9.6e-08 60.5 47 61.7
QL05p022088 Quercus lobata HOM05D000847 ORTHO05D007447 1.3e-07 60.1 51 54.9
Ciclev10025300m.g Citrus clementina HOM05D000847 ORTHO05D007447 1.6e-07 59.7 47 57.4
MBI01_g39981_MAGBIO Magnolia biondii HOM05D000847 ORTHO05D007447 1.6e-07 59.7 47 59.6
SGA_v2.0_scaffold37G14841 Striga asiatica HOM05D000847 ORTHO05D007447 1.6e-07 59.7 44 68.2
CiPaw.01G236800 Carya illinoinensis HOM05D000847 ORTHO05D007447 2.1e-07 59.3 47 57.4
Duzib235G1387 Durio zibethinus HOM05D000847 ORTHO05D007447 2.1e-07 59.3 47 57.4
Sp3g14460 Schrenkiella parvula HOM05D000847 ORTHO05D007447 2.1e-07 59.3 58 53.4
Thecc.06G091400 Theobroma cacao HOM05D000847 ORTHO05D007447 2.1e-07 59.3 47 57.4
Actinidia21675 Actinidia chinensis HOM05D000847 ORTHO05D007447 2.8e-07 58.9 47 61.7
Haze_16373 Corylus avellana HOM05D000847 ORTHO05D007447 2.8e-07 58.9 47 57.4
vmacro18895 Vaccinium macrocarpon HOM05D000847 ORTHO05D007447 2.8e-07 58.9 47 57.4
Aa31LG8G3260 Aethionema arabicum HOM05D000847 ORTHO05D007447 3.6e-07 58.5 51 54.9
CANSAT56G4327 Cannabis sativa HOM05D000847 ORTHO05D007447 3.6e-07 58.5 47 59.6
Glyma.13G357700 Glycine max HOM05D000847 ORTHO05D007447 3.6e-07 58.5 46 58.7
Glyma.15G015700 Glycine max HOM05D000847 ORTHO05D007447 4.8e-07 58.2 46 56.5
Cfa002087 Carpinus fangiana HOM05D000847 ORTHO05D007447 6.2e-07 57.8 47 57.4
Ca_01125_v3 Cicer arietinum L. HOM05D000847 ORTHO05D007447 6.2e-07 57.8 46 56.5
COL.COLO4_30421 Corchorus olitorius HOM05D000847 ORTHO05D007447 6.2e-07 57.8 47 57.4
Manes.04G128900 Manihot esculenta HOM05D000847 ORTHO05D007447 6.2e-07 57.8 47 59.6
AT3G16110 Arabidopsis thaliana HOM05D000847 ORTHO05D007447 8.1e-07 57.4 58 51.7
Thhalv10020584m.g Eutrema salsugineum HOM05D000847 ORTHO05D007447 8.1e-07 57.4 56 51.8
Gohir.A05G131300 Gossypium hirsutum HOM05D000847 ORTHO05D007447 8.1e-07 57.4 47 59.6
Gohir.D05G130800 Gossypium hirsutum HOM05D000847 ORTHO05D007447 8.1e-07 57.4 47 59.6
Gorai.009G134500 Gossypium raimondii HOM05D000847 ORTHO05D007447 8.1e-07 57.4 47 59.6
HanXRQChr16g0500911 Helianthus annuus HOM05D000847 ORTHO05D007447 8.1e-07 57.4 47 53.2
Hund06624 Selenicereus undatus HOM05D000847 ORTHO05D007447 8.1e-07 57.4 46 58.7
Carub.0003s1584 Capsella rubella HOM05D000847 ORTHO05D007447 1.1e-06 57.0 58 50.0
Dinv30490 Davidia involucrata HOM05D000847 ORTHO05D007447 1.1e-06 57.0 47 59.6
Eucgr.F03031 Eucalyptus grandis HOM05D000847 ORTHO05D007447 1.1e-06 57.0 47 53.2
Thhalv10011373m.g Eutrema salsugineum HOM05D000847 ORTHO05D007447 1.1e-06 57.0 47 53.2
Lalb_Chr14g0373311 Lupinus albus HOM05D000847 ORTHO05D007447 1.1e-06 57.0 46 58.7
Nitab4.5_0001315g0230 Nicotiana tabacum HOM05D000847 ORTHO05D007447 1.1e-06 57.0 51 56.9
MSTRG.22669 Avicennia marina HOM05D000847 ORTHO05D007447 1.4e-06 56.6 44 63.6
Lsat_1_v5_gn_4_101980 Lactuca sativa HOM05D000847 ORTHO05D007447 1.4e-06 56.6 51 47.1
BcaC08g43381 Brassica carinata HOM05D000847 ORTHO05D007447 1.8e-06 56.2 47 53.2
A08p02250 Brassica napus HOM05D000847 ORTHO05D007447 1.8e-06 56.2 47 57.4
C06p07480 Brassica napus HOM05D000847 ORTHO05D007447 1.8e-06 56.2 47 53.2
BolC6t35837H Brassica oleracea HOM05D000847 ORTHO05D007447 1.8e-06 56.2 47 53.2
BraA08t32270Z Brassica rapa HOM05D000847 ORTHO05D007447 1.8e-06 56.2 47 57.4
Migut.I00949 Erythranthe guttata HOM05D000847 ORTHO05D007447 1.8e-06 56.2 44 61.4
Psat5g298280 Pisum sativum HOM05D000847 ORTHO05D007447 1.8e-06 56.2 51 52.9
TPR.G37182 Trifolium pratense HOM05D000847 ORTHO05D007447 1.8e-06 56.2 46 56.5
CARHR091270 Cardamine hirsuta HOM05D000847 ORTHO05D007447 2.4e-06 55.8 58 50.0
Os06g0163400 Oryza sativa ssp. japonica HOM05D000847 ORTHO05D007447 2.4e-06 55.8 47 53.2
Sp1g38800 Schrenkiella parvula HOM05D000847 ORTHO05D007447 2.4e-06 55.8 48 52.1
Solyc03g120720.3 Solanum lycopersicum HOM05D000847 ORTHO05D007447 2.4e-06 55.8 51 54.9
PGSC0003DMG400002622 Solanum tuberosum HOM05D000847 ORTHO05D007447 2.4e-06 55.8 48 60.4
Carub.0001s4123 Capsella rubella HOM05D000847 ORTHO05D007447 3.1e-06 55.5 51 49.0
CAN.G438.16 Capsicum annuum HOM05D000847 ORTHO05D007447 3.1e-06 55.5 51 54.9
Lj3g0009444 Lotus japonicus HOM05D000847 ORTHO05D007447 3.1e-06 55.5 46 54.3
FAN05G5441 Fragaria x ananassa HOM05D000847 ORTHO05D007447 4.0e-06 55.1 47 55.3
Medtr2g101880 Medicago truncatula HOM05D000847 ORTHO05D007447 4.0e-06 55.1 46 54.3
AL1G60430 Arabidopsis lyrata HOM05D000847 ORTHO05D007447 5.3e-06 54.7 47 51.1
A06p01940 Brassica napus HOM05D000847 ORTHO05D007447 5.3e-06 54.7 47 51.1
BraA06t23410Z Brassica rapa HOM05D000847 ORTHO05D007447 5.3e-06 54.7 47 51.1
Aa31LG10G2650 Aethionema arabicum HOM05D000847 ORTHO05D007447 6.9e-06 54.3 47 57.4
BcaC01g01316 Brassica carinata HOM05D000847 ORTHO05D007447 6.9e-06 54.3 47 53.2
C03p90530 Brassica napus HOM05D000847 ORTHO05D007447 6.9e-06 54.3 47 53.2
BolC3t21376H Brassica oleracea HOM05D000847 ORTHO05D007447 6.9e-06 54.3 47 53.2
Peaxi162Scf00015g00038 Petunia axillaris HOM05D000847 ORTHO05D007447 6.9e-06 54.3 51 52.9
Sopen03g039540 Solanum pennellii HOM05D000847 ORTHO05D007447 6.9e-06 54.3 47 55.3
Rhsim08G0222900 Rhododendron simsii HOM05D000847 ORTHO05D007447 9.0e-06 53.9 47 55.3


User provided reference genes

Program Settings