Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G00567 Aquilegia oxysepala HOM05D006452 ORTHO05D008068 0.0e+00 1267.3 651 100.0
TAR629G0815 Trochodendron aralioides HOM05D006452 ORTHO05D008068 8.0e-211 737.6 649 60.9
Nn1g06365 Nelumbo nucifera HOM05D006452 ORTHO05D008068 1.8e-194 683.3 648 57.3
Cfa000544 Carpinus fangiana HOM05D006452 ORTHO05D008068 6.6e-189 664.8 597 58.8
CiPaw.09G065500 Carya illinoinensis HOM05D006452 ORTHO05D008068 9.5e-188 661.0 626 55.4
QL05p043485 Quercus lobata HOM05D006452 ORTHO05D008068 9.2e-183 644.4 630 55.6
Ciclev10014636m.g Citrus clementina HOM05D006452 ORTHO05D008068 7.8e-182 641.3 632 54.9
GSVIVG01021140001 Vitis vinifera HOM05D006452 ORTHO05D008068 6.6e-181 638.3 647 54.3
Hma1.2p1_1465F.1_g285350 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 8.1e-179 631.3 572 59.4
MD05G1308100 Malus domestica HOM05D006452 ORTHO05D008068 1.4e-178 630.6 627 54.5
RcHm_v2.0_Chr5g0009531 Rosa chinensis HOM05D006452 ORTHO05D008068 1.4e-178 630.6 628 54.5
PSO832G2664 Papaver somniferum HOM05D006452 ORTHO05D008068 4.0e-178 629.0 714 49.3
CSS0041533 Camellia sinensis var. sinensis HOM05D006452 ORTHO05D008068 2.6e-177 626.3 638 55.0
PSO210G4080 Papaver somniferum HOM05D006452 ORTHO05D008068 4.4e-177 625.5 714 49.6
Thecc.06G178700 Theobroma cacao HOM05D006452 ORTHO05D008068 2.9e-176 622.9 629 54.1
Actinidia39488 Actinidia chinensis HOM05D006452 ORTHO05D008068 6.4e-176 621.7 615 55.0
CANSAT35G2027 Cannabis sativa HOM05D006452 ORTHO05D008068 6.4e-176 621.7 646 52.3
Sabra04G0032100 Salix brachista HOM05D006452 ORTHO05D008068 2.1e-174 616.7 650 51.8
Duzib235G0445 Durio zibethinus HOM05D006452 ORTHO05D008068 2.7e-174 616.3 654 53.1
FvH4_3g08370 Fragaria vesca HOM05D006452 ORTHO05D008068 1.0e-173 614.4 644 52.5
Prupe.4G054700 Prunus persica HOM05D006452 ORTHO05D008068 1.9e-172 610.1 626 53.8
Gorai.010G157000 Gossypium raimondii HOM05D006452 ORTHO05D008068 6.2e-171 605.1 636 52.4
Lj6g0021964 Lotus japonicus HOM05D006452 ORTHO05D008068 1.2e-169 600.9 634 51.9
Ca_00397_v3 Cicer arietinum L. HOM05D006452 ORTHO05D008068 1.3e-168 597.4 636 51.3
Manes.17G051000 Manihot esculenta HOM05D006452 ORTHO05D008068 1.3e-168 597.4 646 50.9
Oeu001094.1 Olea europaea HOM05D006452 ORTHO05D008068 2.2e-168 596.7 614 54.1
Glyma.13G152304 Glycine max HOM05D006452 ORTHO05D008068 8.4e-168 594.7 603 53.2
Glyma.10G069100 Glycine max HOM05D006452 ORTHO05D008068 1.1e-167 594.3 649 51.6
VMungo0540G0818 Vigna mungo HOM05D006452 ORTHO05D008068 1.9e-167 593.6 603 52.9
Phvul.006G180500 Phaseolus vulgaris HOM05D006452 ORTHO05D008068 4.1e-167 592.4 603 53.1
Lj1A1199G43 Lonicera japonica HOM05D006452 ORTHO05D008068 9.2e-167 591.3 655 51.8
TWI38G0383 Tripterygium wilfordii HOM05D006452 ORTHO05D008068 9.2e-167 591.3 599 53.4
Gohir.A06G134400 Gossypium hirsutum HOM05D006452 ORTHO05D008068 3.5e-166 589.3 644 50.8
Gohir.D06G135100 Gossypium hirsutum HOM05D006452 ORTHO05D008068 7.8e-166 588.2 644 51.2
Lalb_Chr18g0059351 Lupinus albus HOM05D006452 ORTHO05D008068 7.8e-166 588.2 620 51.9
arahy.Tifrunner.gnm1.ann1.FLUH97 Arachis hypogaea HOM05D006452 ORTHO05D008068 1.5e-164 583.9 628 50.0
arahy.Tifrunner.gnm1.ann1.228Z0R Arachis hypogaea HOM05D006452 ORTHO05D008068 5.2e-162 575.5 628 49.8
AUR62031101 Chenopodium quinoa HOM05D006452 ORTHO05D008068 1.2e-161 574.3 589 53.3
Medtr2g014890 Medicago truncatula HOM05D006452 ORTHO05D008068 4.4e-161 572.4 605 50.7
COL.COLO4_31396 Corchorus olitorius HOM05D006452 ORTHO05D008068 2.2e-160 570.1 606 52.5
Nitab4.5_0001375g0100 Nicotiana tabacum HOM05D006452 ORTHO05D008068 8.4e-160 568.2 642 51.6
BcaC01g00067 Brassica carinata HOM05D006452 ORTHO05D008068 1.1e-159 567.8 639 49.8
AUR62014896 Chenopodium quinoa HOM05D006452 ORTHO05D008068 1.9e-159 567.0 591 53.5
C03p75340 Brassica napus HOM05D006452 ORTHO05D008068 7.8e-158 561.6 640 49.4
Carub.0001s2699 Capsella rubella HOM05D006452 ORTHO05D008068 3.0e-157 559.7 619 49.6
EL10Ac8g20457 Beta vulgaris HOM05D006452 ORTHO05D008068 8.7e-157 558.1 657 50.5
Sp1g24780 Schrenkiella parvula HOM05D006452 ORTHO05D008068 8.7e-157 558.1 619 49.9
Nitab4.5_0000516g0020 Nicotiana tabacum HOM05D006452 ORTHO05D008068 1.5e-156 557.4 646 50.9
Rhsim02G0137400 Rhododendron simsii HOM05D006452 ORTHO05D008068 1.5e-156 557.4 668 49.0
BolC3t19793H Brassica oleracea HOM05D006452 ORTHO05D008068 4.3e-156 555.8 640 49.1
THA.LOC104812622 Tarenaya hassleriana HOM05D006452 ORTHO05D008068 4.3e-156 555.8 640 49.8
Migut.M01092 Erythranthe guttata HOM05D006452 ORTHO05D008068 9.6e-156 554.7 621 50.1
PGSC0003DMG400012819 Solanum tuberosum HOM05D006452 ORTHO05D008068 2.1e-155 553.5 652 48.8
CARHR028010 Cardamine hirsuta HOM05D006452 ORTHO05D008068 2.8e-155 553.1 617 49.9
AT1G28530 Arabidopsis thaliana HOM05D006452 ORTHO05D008068 8.1e-155 551.6 634 49.1
ClCG01G023380 Citrullus lanatus HOM05D006452 ORTHO05D008068 1.1e-154 551.2 657 49.0
MELO3C007247.2 Cucumis melo HOM05D006452 ORTHO05D008068 1.1e-154 551.2 647 48.4
FAN25G3335 Fragaria x ananassa HOM05D006452 ORTHO05D008068 5.3e-154 548.9 626 49.7
Cc00_g07720 Coffea canephora HOM05D006452 ORTHO05D008068 1.2e-153 547.7 651 49.2
MBI07_g32549_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 2.0e-153 547.0 570 53.2
BraA08t34497Z Brassica rapa HOM05D006452 ORTHO05D008068 3.4e-153 546.2 644 48.8
A08p25460 Brassica napus HOM05D006452 ORTHO05D008068 4.5e-153 545.8 640 48.8
Thhalv10007091m.g Eutrema salsugineum HOM05D006452 ORTHO05D008068 9.9e-153 544.7 623 49.4
Sopen03g002290 Solanum pennellii HOM05D006452 ORTHO05D008068 1.7e-152 543.9 657 48.6
ECA234G2428 Erigeron canadensis HOM05D006452 ORTHO05D008068 2.2e-152 543.5 638 48.7
FAN21G3590 Fragaria x ananassa HOM05D006452 ORTHO05D008068 3.8e-152 542.7 629 48.5
BcaB03g12098 Brassica carinata HOM05D006452 ORTHO05D008068 1.4e-151 540.8 598 49.3
AL1G42150 Arabidopsis lyrata HOM05D006452 ORTHO05D008068 1.6e-150 537.3 643 48.2
Lsat_1_v5_gn_4_51620 Lactuca sativa HOM05D006452 ORTHO05D008068 7.4e-148 528.5 617 47.6
Atru.chr10.1767 Acer truncatum HOM05D006452 ORTHO05D008068 9.6e-148 528.1 571 50.6
Aa31LG6G11040 Aethionema arabicum HOM05D006452 ORTHO05D008068 2.1e-147 526.9 678 44.4
HanXRQChr16g0518591 Helianthus annuus HOM05D006452 ORTHO05D008068 4.8e-147 525.8 644 46.4
Haze_06337 Corylus avellana HOM05D006452 ORTHO05D008068 1.4e-146 524.2 645 47.8
SalBow8G3895 Salvia bowleyana HOM05D006452 ORTHO05D008068 1.8e-146 523.9 658 46.8
FAN11G3013 Fragaria x ananassa HOM05D006452 ORTHO05D008068 3.1e-146 523.1 642 48.3
ATR0602G160 Amborella trichopoda HOM05D006452 ORTHO05D008068 6.4e-144 515.4 625 48.0
Dinv40619 Davidia involucrata HOM05D006452 ORTHO05D008068 8.4e-144 515.0 469 57.1
SGA_v2.0_scaffold16G07655 Striga asiatica HOM05D006452 ORTHO05D008068 1.8e-133 480.7 646 43.3
Solyc03g006280.4 Solanum lycopersicum HOM05D006452 ORTHO05D008068 2.1e-126 457.2 656 44.1
unitig_8.g4630 Utricularia gibba HOM05D006452 ORTHO05D008068 3.0e-125 453.4 645 42.0
Hma1.2p1_1465F.1_g285340 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 5.7e-124 449.1 431 57.8
Potri.004G051000 Populus trichocarpa HOM05D006452 ORTHO05D008068 2.2e-123 447.2 439 51.7
CDE10G0189 Ceratophyllum demersum HOM05D006452 ORTHO05D008068 6.3e-123 445.7 512 47.7
HPP92_000497 Vanilla planifolia HOM05D006452 ORTHO05D008068 1.4e-122 444.5 650 42.9
Sed0012413 Sechium edule HOM05D006452 ORTHO05D008068 5.3e-122 442.6 477 51.4
FAN16G3312 Fragaria x ananassa HOM05D006452 ORTHO05D008068 5.9e-121 439.1 438 51.6
PGR004G2109 Punica granatum HOM05D006452 ORTHO05D008068 1.7e-120 437.6 463 51.6
TPR.G11703 Trifolium pratense HOM05D006452 ORTHO05D008068 2.2e-120 437.2 445 53.5
Cpa.g.sc7.8 Carica papaya HOM05D006452 ORTHO05D008068 6.5e-120 435.6 489 50.9
DCAR_006579 Daucus carota HOM05D006452 ORTHO05D008068 2.4e-114 417.2 632 42.6
Sc17g0005860 Simmondsia chinensis HOM05D006452 ORTHO05D008068 9.1e-114 415.2 652 42.2
Peaxi162Scf01018g00215 Petunia axillaris HOM05D006452 ORTHO05D008068 3.6e-110 403.3 662 41.2
MBI07_g06446_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.8e-109 401.0 655 40.3
CAN.G189.65 Capsicum annuum HOM05D006452 ORTHO05D008068 4.4e-108 396.4 427 52.9
Os02g0109900 Oryza sativa ssp. japonica HOM05D006452 ORTHO05D008068 2.0e-105 387.5 585 39.5
Psat1g201640 Pisum sativum HOM05D006452 ORTHO05D008068 6.5e-104 382.5 385 53.5
Eucgr.D00580 Eucalyptus grandis HOM05D006452 ORTHO05D008068 8.5e-104 382.1 386 55.4
Hund23835 Selenicereus undatus HOM05D006452 ORTHO05D008068 1.4e-101 374.8 496 48.0
CsaV3_6G050510 Cucumis sativus L. HOM05D006452 ORTHO05D008068 8.8e-101 372.1 438 46.6
vmacro15945 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 2.0e-100 370.9 417 51.1
Zm00001eb229620 Zea mays HOM05D006452 ORTHO05D008068 1.0e-93 348.6 650 36.5
Mapoly0052s0014 Marchantia polymorpha HOM05D006452 ORTHO05D008068 3.1e-69 267.3 592 30.2
CAN.G1286.36 Capsicum annuum HOM05D006452 ORTHO05D008068 1.1e-66 258.8 301 49.8
CAN.G801.36 Capsicum annuum HOM05D006452 ORTHO05D008068 3.3e-55 220.7 237 51.9
AagrBONN_evm.TU.Sc2ySwM_228.5590 Anthoceros agrestis HOM05D006452 ORTHO05D008068 1.4e-50 205.3 609 29.1
TPR.G10795 Trifolium pratense HOM05D006452 ORTHO05D008068 2.3e-48 198.0 232 47.0
Psat1g201600 Pisum sativum HOM05D006452 ORTHO05D008068 1.4e-45 188.7 220 43.6
vmacro15946 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 1.1e-37 162.5 292 36.0
SEGI_16257 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 2.2e-35 154.8 302 32.5
unitig_8.g4641 Utricularia gibba HOM05D006452 ORTHO05D008068 1.9e-31 141.7 162 44.4
Lsat_1_v5_gn_9_9480 Lactuca sativa HOM05D006452 ORTHO05D008068 1.1e-29 136.0 236 36.0
SEGI_13408 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 9.0e-29 132.9 211 36.5
CDE10G0511 Ceratophyllum demersum HOM05D002520 ORTHO05D003144 4.0e-21 107.5 140 54.3
Pp3c17_22050 Physcomitrium patens HOM05D006452 ORTHO05D008068 1.0e-16 92.8 359 27.3
BcaC01g06820 Brassica carinata HOM05D006452 ORTHO05D008068 2.4e-13 81.6 89 52.8
GSVIVG01026713001 Vitis vinifera HOM05D006452 ORTHO05D008068 5.3e-13 80.5 69 59.4
MBI15_g20021_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.0e-11 76.3 121 43.8
Peaxi162Scf01018g00213 Petunia axillaris HOM05D006452 ORTHO05D008068 2.2e-11 75.1 77 57.1
MBI05_g40582_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D029689 5.0e-11 73.9 147 34.7
MBI05_g44052_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 5.5e-10 70.5 73 52.1
FvH4_3g08350 Fragaria vesca HOM05D003433 ORTHO05D003921 1.2e-09 69.3 102 40.2
MBI05_g22668_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.6e-09 68.9 67 53.7
CAN.G638.7 Capsicum annuum HOM05D006452 ORTHO05D008068 2.1e-09 68.6 192 30.7


User provided reference genes

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