Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G00544 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 0.0e+00 1214.5 613 100.0
TAR627G0485 Trochodendron aralioides HOM05D004843 ORTHO05D005833 2.4e-164 583.2 558 53.4
Nn1g06340 Nelumbo nucifera HOM05D004843 ORTHO05D005833 7.4e-150 535.0 550 50.9
Aqoxy7G02743 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 4.1e-140 502.7 277 88.1
CiPaw.08G115600 Carya illinoinensis HOM05D004843 ORTHO05D005833 6.1e-128 462.2 569 44.6
Dinv20222 Davidia involucrata HOM05D004843 ORTHO05D005833 1.1e-126 458.0 591 43.3
CSS0025192 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 6.3e-125 452.2 618 42.4
Lj1C835G2 Lonicera japonica HOM05D004843 ORTHO05D005833 8.2e-125 451.8 585 44.8
GSVIVG01014249001 Vitis vinifera HOM05D004843 ORTHO05D005833 2.7e-123 446.8 595 42.4
Cfa019615 Carpinus fangiana HOM05D004843 ORTHO05D005833 4.5e-123 446.0 559 43.8
Oeu024378.1 Olea europaea HOM05D004843 ORTHO05D005833 2.2e-122 443.7 558 42.3
TWI38G0787 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 1.1e-121 441.4 559 43.6
Actinidia35229 Actinidia chinensis HOM05D004843 ORTHO05D005833 4.2e-121 439.5 609 43.5
QL11p026708 Quercus lobata HOM05D004843 ORTHO05D005833 7.2e-121 438.7 665 41.4
Hma1.2p1_0416F.1_g148560 Hydrangea macrophylla HOM05D004843 ORTHO05D005833 4.8e-117 426.0 635 41.4
PSO832G1805 Papaver somniferum HOM05D004843 ORTHO05D005833 2.0e-115 420.6 598 43.1
MELO3C016086.2 Cucumis melo HOM05D004843 ORTHO05D005833 8.5e-114 415.2 593 41.3
CsaV3_4G008440 Cucumis sativus L. HOM05D004843 ORTHO05D005833 8.5e-114 415.2 593 41.3
MSTRG.12883 Avicennia marina HOM05D004843 ORTHO05D005833 2.1e-112 410.6 561 41.5
Nitab4.5_0007508g0020 Nicotiana tabacum HOM05D004843 ORTHO05D005833 2.7e-112 410.2 622 39.5
Solyc12g014090.2 Solanum lycopersicum HOM05D004843 ORTHO05D005833 2.3e-111 407.1 540 40.6
Ciclev10019192m.g Citrus clementina HOM05D004843 ORTHO05D005833 5.2e-111 406.0 639 39.3
Sopen12g005870 Solanum pennellii HOM05D004843 ORTHO05D005833 2.0e-110 404.1 540 40.2
Sed0025158 Sechium edule HOM05D004843 ORTHO05D005833 3.4e-110 403.3 615 40.5
Lsat_1_v5_gn_5_128660 Lactuca sativa HOM05D004843 ORTHO05D005833 4.4e-110 402.9 548 41.1
CAN.G765.5 Capsicum annuum HOM05D004843 ORTHO05D005833 5.7e-110 402.5 547 41.0
PSO210G0781 Papaver somniferum HOM05D004843 ORTHO05D005833 1.3e-109 401.4 595 41.8
PGR031G2553 Punica granatum HOM05D004843 ORTHO05D005833 1.7e-109 401.0 562 40.6
Glyma.12G227600 Glycine max HOM05D004843 ORTHO05D005833 3.7e-109 399.8 567 40.4
Duzib268G0207 Durio zibethinus HOM05D004843 ORTHO05D005833 1.1e-108 398.3 587 40.7
Glyma.13G272600 Glycine max HOM05D004843 ORTHO05D005833 4.1e-108 396.4 557 40.8
VMungo1080G1831 Vigna mungo HOM05D004843 ORTHO05D005833 1.7e-106 391.0 562 39.3
Cc05_g11520 Coffea canephora HOM05D004843 ORTHO05D005833 2.3e-106 390.6 563 39.6
MD10G1064700 Malus domestica HOM05D004843 ORTHO05D005833 2.9e-106 390.2 557 41.7
Gohir.D05G347266 Gossypium hirsutum HOM05D004843 ORTHO05D005833 3.8e-106 389.8 598 39.1
MD03G1237200 Malus domestica HOM05D004843 ORTHO05D005833 6.6e-106 389.0 556 41.7
Manes.15G090500 Manihot esculenta HOM05D004843 ORTHO05D005833 1.9e-105 387.5 575 40.3
Nitab4.5_0003077g0040 Nicotiana tabacum HOM05D004843 ORTHO05D005833 9.5e-105 385.2 558 40.5
Gohir.A04G036900 Gossypium hirsutum HOM05D004843 ORTHO05D005833 1.6e-104 384.4 598 39.0
Gorai.009G374700 Gossypium raimondii HOM05D004843 ORTHO05D005833 2.8e-104 383.6 598 39.1
vmacro09509 Vaccinium macrocarpon HOM05D004843 ORTHO05D005833 1.8e-103 380.9 675 37.5
Cpa.g.sc131.81 Carica papaya HOM05D004843 ORTHO05D005833 3.4e-102 376.7 556 40.6
ClCG07G009890 Citrullus lanatus HOM05D004843 ORTHO05D005833 3.4e-102 376.7 608 38.8
Oeu061997.2 Olea europaea HOM05D004843 ORTHO05D005833 3.4e-102 376.7 591 39.1
SGA_v2.0_scaffold70G23704 Striga asiatica HOM05D004843 ORTHO05D005833 5.7e-102 375.9 600 38.5
Lj3g0014260 Lotus japonicus HOM05D004843 ORTHO05D005833 9.8e-102 375.2 591 38.7
DCAR_021007 Daucus carota HOM05D004843 ORTHO05D005833 2.2e-101 374.0 552 40.2
Phvul.005G067200 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 8.3e-101 372.1 624 36.2
Oeu061325.2 Olea europaea HOM05D004843 ORTHO05D005833 1.1e-100 371.7 548 38.7
Eucgr.F03287 Eucalyptus grandis HOM05D004843 ORTHO05D005833 4.1e-100 369.8 554 39.9
Prupe.4G172200 Prunus persica HOM05D004843 ORTHO05D005833 4.1e-100 369.8 614 37.8
Rhsim04G0023600 Rhododendron simsii HOM05D004843 ORTHO05D005833 7.8e-99 365.5 711 35.2
RcHm_v2.0_Chr6g0312691 Rosa chinensis HOM05D004843 ORTHO05D005833 3.9e-98 363.2 577 38.3
FvH4_3g19060 Fragaria vesca HOM05D004843 ORTHO05D005833 2.5e-97 360.5 577 38.3
RcHm_v2.0_Chr5g0031851 Rosa chinensis HOM05D004843 ORTHO05D005833 3.3e-97 360.1 603 37.5
Potri.012G106300 Populus trichocarpa HOM05D004843 ORTHO05D005833 2.1e-96 357.5 583 37.4
FAN25G1696 Fragaria x ananassa HOM05D004843 ORTHO05D005833 1.8e-95 354.4 577 37.8
HanXRQChr10g0302381 Helianthus annuus HOM05D004843 ORTHO05D005833 2.3e-95 354.0 559 37.0
Lj1g0026777 Lotus japonicus HOM05D004843 ORTHO05D005833 2.9e-93 347.1 557 37.2
arahy.Tifrunner.gnm1.ann1.60B7R0 Arachis hypogaea HOM05D004843 ORTHO05D005833 6.4e-93 345.9 590 37.3
DCAR_031588 Daucus carota HOM05D004843 ORTHO05D005833 6.4e-93 345.9 513 38.6
EL10Ac4g08285 Beta vulgaris HOM05D004843 ORTHO05D005833 5.4e-92 342.8 596 38.3
arahy.Tifrunner.gnm1.ann1.G1PXE9 Arachis hypogaea HOM05D004843 ORTHO05D005833 4.6e-91 339.7 572 37.9
Sabra12G0078800 Salix brachista HOM05D004843 ORTHO05D005833 3.0e-90 337.0 642 35.8
AUR62036128 Chenopodium quinoa HOM05D004843 ORTHO05D005833 3.9e-90 336.7 616 36.5
Peaxi162Scf00000g02614 Petunia axillaris HOM05D004843 ORTHO05D005833 8.6e-90 335.5 614 34.0
TPR.G29644 Trifolium pratense HOM05D004843 ORTHO05D005833 8.6e-90 335.5 622 37.0
Psat5g240000 Pisum sativum HOM05D004843 ORTHO05D005833 3.6e-88 330.1 586 37.2
CiPaw.11G165700 Carya illinoinensis HOM05D004843 ORTHO05D005833 1.4e-87 328.2 563 38.0
Migut.H01969 Erythranthe guttata HOM05D004843 ORTHO05D005833 1.8e-87 327.8 559 35.6
Medtr2g078390 Medicago truncatula HOM05D004843 ORTHO05D005833 2.3e-87 327.4 633 35.7
SalBow7G4166 Salvia bowleyana HOM05D004843 ORTHO05D005833 5.2e-87 326.2 503 38.2
Lalb_Chr25g0286141 Lupinus albus HOM05D004843 ORTHO05D005833 6.8e-87 325.9 613 35.1
Sc03g0010280 Simmondsia chinensis HOM05D004843 ORTHO05D005833 8.3e-85 318.9 617 36.5
CSS0012812 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 4.1e-84 316.6 432 42.8
FAN11G0804 Fragaria x ananassa HOM05D004843 ORTHO05D005833 5.4e-84 316.2 577 35.7
ATR0165G025 Amborella trichopoda HOM05D004843 ORTHO05D005833 1.9e-81 307.8 592 35.3
AUR62026744 Chenopodium quinoa HOM05D004843 ORTHO05D005833 8.1e-80 302.4 505 37.8
CDE10G0946 Ceratophyllum demersum HOM05D004843 ORTHO05D005833 1.1e-79 302.0 470 38.5
MBI02_g30880_MAGBIO Magnolia biondii HOM05D004843 ORTHO05D005833 1.1e-79 302.0 424 43.2
Os06g0244100 Oryza sativa ssp. japonica HOM05D004843 ORTHO05D005833 1.5e-78 298.1 558 34.2
Hund13862 Selenicereus undatus HOM05D004843 ORTHO05D005833 1.5e-78 298.1 684 33.0
Glyma.13G009900 Glycine max HOM05D004843 ORTHO05D005833 5.8e-78 296.2 499 35.7
Zm00001eb280030 Zea mays HOM05D004843 ORTHO05D005833 2.4e-76 290.8 558 33.3
AUR62019511 Chenopodium quinoa HOM05D004843 ORTHO05D005833 5.4e-76 289.7 572 35.7
HPP92_010831 Vanilla planifolia HOM05D004843 ORTHO05D005833 2.1e-75 287.7 491 35.2
THA.LOC104798752 Tarenaya hassleriana HOM05D004843 ORTHO05D005833 1.3e-74 285.0 598 34.1
SalBow7G4326 Salvia bowleyana HOM05D004843 ORTHO05D005833 6.6e-74 282.7 419 39.1
Haze_09370 Corylus avellana HOM05D004843 ORTHO05D005833 4.3e-73 280.0 411 39.4
Thecc.07G102200 Theobroma cacao HOM05D004843 ORTHO05D005833 1.2e-72 278.5 288 49.0
SEGI_17777 Sequoiadendron giganteum HOM05D004843 ORTHO05D005833 2.4e-71 274.2 558 33.2
AT1G53200 Arabidopsis thaliana HOM05D004843 ORTHO05D005833 7.8e-67 259.2 585 32.8
HPP92_010833 Vanilla planifolia HOM05D004843 ORTHO05D005833 1.3e-66 258.5 395 39.0
Carub.0001s4239 Capsella rubella HOM05D004843 ORTHO05D005833 5.6e-65 253.1 619 33.0
Phvul.005G068700 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 2.8e-64 250.8 478 35.1
Aa31LG6G6390 Aethionema arabicum HOM05D000944 ORTHO05D003581 3.6e-64 250.4 597 32.0
AL1G61600 Arabidopsis lyrata HOM05D004843 ORTHO05D005833 4.8e-64 250.0 612 32.5
Thhalv10028227m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 5.3e-63 246.5 555 34.2
C06p14590 Brassica napus HOM05D004843 ORTHO05D005833 6.9e-63 246.1 569 32.9
Thhalv10011326m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 6.9e-63 246.1 574 32.8
CARHR043430 Cardamine hirsuta HOM05D004843 ORTHO05D005833 9.0e-63 245.7 542 33.0
BolC6t36637H Brassica oleracea HOM05D004843 ORTHO05D005833 3.4e-62 243.8 578 32.9
ECA234G3172 Erigeron canadensis HOM05D004843 ORTHO05D005833 5.8e-62 243.0 491 34.2
BcaC08g44060 Brassica carinata HOM05D004843 ORTHO05D005833 1.7e-61 241.5 566 32.9
BcaB02g10938 Brassica carinata HOM05D004843 ORTHO05D005833 2.9e-61 240.7 556 33.1
BraA05t20741Z Brassica rapa HOM05D004843 ORTHO05D005833 1.4e-60 238.4 566 32.7
Sp1g39780 Schrenkiella parvula HOM05D004843 ORTHO05D005833 1.9e-60 238.0 561 31.7
A05p18490 Brassica napus HOM05D004843 ORTHO05D005833 3.5e-59 233.8 574 32.2
Atru.chr2.138 Acer truncatum HOM05D004843 ORTHO05D005833 3.0e-58 230.7 214 51.9
unitig_26.g10042 Utricularia gibba HOM05D004843 ORTHO05D005833 2.5e-57 227.6 433 32.1
Thecc.07G102000 Theobroma cacao HOM05D004843 ORTHO05D005833 5.6e-57 226.5 241 49.0
TWI31G0686 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 1.4e-55 221.9 535 30.1
DCAR_032123 Daucus carota HOM05D004843 ORTHO05D005833 5.7e-41 173.3 172 51.7
Oeu018948.1 Olea europaea HOM05D004843 ORTHO05D005833 8.2e-40 169.5 296 35.5
Mapoly0139s0008 Marchantia polymorpha HOM05D004843 ORTHO05D005833 1.5e-38 165.2 581 28.2
C06p08970 Brassica napus HOM05D004843 ORTHO05D005833 3.8e-37 160.6 213 44.6
Ca_15018_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 6.5e-37 159.8 435 32.4
BolC6t35976H Brassica oleracea HOM05D004843 ORTHO05D005833 2.5e-36 157.9 233 42.9
CAN.G349.3 Capsicum annuum HOM05D004843 ORTHO05D005833 2.1e-35 154.8 272 36.8
Oeu038157.2 Olea europaea HOM05D004843 ORTHO05D005833 3.6e-35 154.1 229 39.7
A06p01130 Brassica napus HOM05D004843 ORTHO05D005833 6.1e-35 153.3 270 38.1
Aa31sc1038G10 Aethionema arabicum HOM05D004843 ORTHO05D005833 3.0e-34 151.0 439 28.7
Pp3c12_9280 Physcomitrium patens HOM05D004843 ORTHO05D005833 3.3e-33 147.5 623 25.2
BcaC08g43511 Brassica carinata HOM05D004843 ORTHO05D005833 1.4e-31 142.1 432 30.1
AagrBONN_evm.TU.Sc2ySwM_228.3860 Anthoceros agrestis HOM05D004843 ORTHO05D005833 4.1e-31 140.6 443 27.5
Aqoxy7G02744 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 1.2e-30 139.0 89 75.3
Thecc.07G101600 Theobroma cacao HOM05D004843 ORTHO05D005833 3.2e-28 131.0 163 44.8
Atru.chr2.140 Acer truncatum HOM05D004843 ORTHO05D005833 9.4e-28 129.4 133 44.4
Thecc.07G101400 Theobroma cacao HOM05D004843 ORTHO05D005833 1.4e-26 125.6 163 43.6
Thecc.07G102300 Theobroma cacao HOM05D004843 ORTHO05D005833 1.8e-26 125.2 195 38.5
Oeu027285.1 Olea europaea HOM05D004843 ORTHO05D005833 1.1e-25 122.5 155 42.6
Ca_04025_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 1.3e-24 119.0 434 30.0
AagrBONN_evm.TU.Sc2ySwM_228.3857 Anthoceros agrestis HOM05D004843 ORTHO05D005833 2.1e-19 101.7 456 24.1
BraA06t23340Z Brassica rapa HOM05D004843 ORTHO05D005833 4.7e-19 100.5 163 38.0
CAN.G349.2 Capsicum annuum HOM05D004843 ORTHO05D005833 2.3e-18 98.2 123 41.5
SHI27679 Sapria himalayana HOM05D000105 ORTHO05D000023 1.0e-13 82.8 106 41.5
Oeu052598.1 Olea europaea HOM05D004843 ORTHO05D005833 5.0e-13 80.5 89 47.2
SHI27676 Sapria himalayana HOM05D004843 ORTHO05D005833 1.9e-12 78.6 217 24.4
Oeu029262.1 Olea europaea HOM05D004843 ORTHO05D005833 9.4e-12 76.3 108 41.7


User provided reference genes

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