Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G00518 Aquilegia oxysepala HOM05D003430 ORTHO05D004809 7.8e-52 206.8 104 100.0
Cfa023013 Carpinus fangiana HOM05D003430 ORTHO05D004809 4.2e-37 157.9 93 87.1
MBI05_g40995_MAGBIO Magnolia biondii HOM05D003430 ORTHO05D004809 9.3e-37 156.8 93 86.0
Dinv06724 Davidia involucrata HOM05D003430 ORTHO05D004809 2.1e-36 155.6 93 86.0
DCAR_032431 Daucus carota HOM05D003430 ORTHO05D004809 4.6e-36 154.5 93 84.9
Lj2C1222G56 Lonicera japonica HOM05D003430 ORTHO05D004809 1.0e-35 153.3 93 84.9
Lj2C1222G64 Lonicera japonica HOM05D003430 ORTHO05D004809 1.0e-35 153.3 93 84.9
LjContig00439g0009782 Lotus japonicus HOM05D003430 ORTHO05D004809 6.7e-35 150.6 93 83.9
LjContig00446g0005008 Lotus japonicus HOM05D003430 ORTHO05D004809 6.7e-35 150.6 93 83.9
Medtr0082s0260 Medicago truncatula HOM05D003430 ORTHO05D004809 6.7e-35 150.6 93 83.9
TPR.G13784 Trifolium pratense HOM05D003430 ORTHO05D004809 6.7e-35 150.6 93 83.9
Peaxi162Scf00456g00037 Petunia axillaris HOM05D003430 ORTHO05D004809 1.5e-34 149.4 93 83.9
RcHm_v2.0_MTg0498431 Rosa chinensis HOM05D003430 ORTHO05D004809 1.5e-34 149.4 92 81.5
Hma1.2p1_1286F.1_g273040 Hydrangea macrophylla HOM05D003430 ORTHO05D004809 1.9e-34 149.1 83 91.6
Lalb_Chr10g0094601 Lupinus albus HOM05D003430 ORTHO05D004809 1.9e-34 149.1 93 82.8
SGA_v2.0_scaffold245G44667 Striga asiatica HOM05D003430 ORTHO05D004809 1.9e-34 149.1 93 82.8
Lalb_Chr00c21g0406111 Lupinus albus HOM05D003430 ORTHO05D004809 3.3e-34 148.3 93 82.8
Lalb_Chr00c39g0409071 Lupinus albus HOM05D003430 ORTHO05D004809 3.3e-34 148.3 93 82.8
Lalb_Chr00c39g0409251 Lupinus albus HOM05D003430 ORTHO05D004809 3.3e-34 148.3 93 82.8
Lalb_Chr00c51g0413171 Lupinus albus HOM05D003430 ORTHO05D004809 3.3e-34 148.3 93 82.8
Solyc00g500224.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 4.3e-34 147.9 93 82.8
Solyc00g500241.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 4.3e-34 147.9 93 82.8
Sopen00g002720 Solanum pennellii HOM05D003430 ORTHO05D004809 4.3e-34 147.9 93 82.8
Nn1g10089 Nelumbo nucifera HOM05D003430 ORTHO05D004809 5.6e-34 147.5 83 90.4
CDE02G0363 Ceratophyllum demersum HOM05D003430 ORTHO05D004809 7.4e-34 147.1 93 80.6
ECA039G0023 Erigeron canadensis HOM05D003430 ORTHO05D004809 9.6e-34 146.7 83 90.4
Peaxi162Scf00456g00035 Petunia axillaris HOM05D003430 ORTHO05D004809 9.6e-34 146.7 93 81.7
CANSAT16G0003 Cannabis sativa HOM05D003430 ORTHO05D004809 1.3e-33 146.4 93 81.7
Sabra12G0092700 Salix brachista HOM05D003430 ORTHO05D004809 2.1e-33 145.6 93 79.6
Gorai.001G162300 Gossypium raimondii HOM05D003430 ORTHO05D004809 2.8e-33 145.2 93 80.6
CARHR282710 Cardamine hirsuta HOM05D003430 ORTHO05D004809 3.7e-33 144.8 93 81.7
CARHR288640 Cardamine hirsuta HOM05D003430 ORTHO05D004809 3.7e-33 144.8 93 81.7
SabraMtG0000400 Salix brachista HOM05D003430 ORTHO05D004809 3.7e-33 144.8 93 79.6
Zm00001eb435500 Zea mays HOM05D003430 ORTHO05D004809 8.1e-33 143.7 91 81.3
Zm00001eb436090 Zea mays HOM05D003430 ORTHO05D004809 8.1e-33 143.7 91 81.3
Zm00001eb437350 Zea mays HOM05D003430 ORTHO05D004809 8.1e-33 143.7 91 81.3
Zm00001eb440330 Zea mays HOM05D003430 ORTHO05D004809 8.1e-33 143.7 91 81.3
Zm00001eb440360 Zea mays HOM05D003430 ORTHO05D004809 8.1e-33 143.7 91 81.3
Zm00001eb442170 Zea mays HOM05D003430 ORTHO05D004809 8.1e-33 143.7 91 81.3
SalBow1G3892 Salvia bowleyana HOM05D003430 ORTHO05D004809 1.4e-32 142.9 83 88.0
Ah.10g028080 Amaranthus hybridus HOM05D003430 ORTHO05D004809 1.8e-32 142.5 93 79.6
ATMG00180 Arabidopsis thaliana HOM05D003430 ORTHO05D004809 1.8e-32 142.5 93 80.6
A04p09460 Brassica napus HOM05D003430 ORTHO05D004809 1.8e-32 142.5 93 80.6
BolSC28t60411H Brassica oleracea HOM05D003430 ORTHO05D004809 1.8e-32 142.5 93 80.6
BraSC177t45748Z Brassica rapa HOM05D003430 ORTHO05D004809 1.8e-32 142.5 93 80.6
arahy.Tifrunner.gnm1.ann1.0UJ9QK Arachis hypogaea HOM05D003430 ORTHO05D004809 3.1e-32 141.7 93 79.6
arahy.Tifrunner.gnm1.ann1.41QMJ9 Arachis hypogaea HOM05D003430 ORTHO05D004809 3.1e-32 141.7 93 79.6
arahy.Tifrunner.gnm1.ann1.AJMC4E Arachis hypogaea HOM05D003430 ORTHO05D004809 3.1e-32 141.7 93 79.6
Psat3g040120 Pisum sativum HOM05D003430 ORTHO05D004809 3.1e-32 141.7 83 88.0
Aa31csc1081G20 Aethionema arabicum HOM05D003430 ORTHO05D004809 4.0e-32 141.4 83 88.0
Lsat_1_v5_gn_6_109000 Lactuca sativa HOM05D003430 ORTHO05D004809 9.0e-32 140.2 93 78.5
Sc11g0004420 Simmondsia chinensis HOM05D003430 ORTHO05D004809 1.2e-31 139.8 83 85.5
Nitab4.5_0001152g0410 Nicotiana tabacum HOM05D003430 ORTHO05D004809 2.0e-31 139.0 93 78.5
AUR62042332 Chenopodium quinoa HOM05D003430 ORTHO05D004809 3.4e-31 138.3 83 85.5
Lsat_1_v5_gn_5_16620 Lactuca sativa HOM05D003430 ORTHO05D004809 5.8e-31 137.5 93 78.5
HanXRQChr00c0055g0571401 Helianthus annuus HOM05D003430 ORTHO05D004809 7.6e-31 137.1 93 77.4
HanXRQMTg0579531 Helianthus annuus HOM05D003430 ORTHO05D004809 7.6e-31 137.1 93 77.4
SHI29634 Sapria himalayana HOM05D003430 ORTHO05D004809 1.0e-30 136.7 93 77.4
EL10Ac3g07005 Beta vulgaris HOM05D003430 ORTHO05D004809 2.9e-30 135.2 83 84.3
Ah.01g011780 Amaranthus hybridus HOM05D003430 ORTHO05D004809 8.4e-30 133.7 83 83.1
unitig_87.g27925 Utricularia gibba HOM05D003430 ORTHO05D004809 8.4e-30 133.7 93 76.3
HanXRQChr11g0335431 Helianthus annuus HOM05D003430 ORTHO05D004809 1.1e-29 133.3 93 75.3
Lj2C1231G44 Lonicera japonica HOM05D003430 ORTHO05D004809 1.1e-29 133.3 79 86.1
PGSC0003DMG400037371 Solanum tuberosum HOM05D003430 ORTHO05D004809 4.2e-29 131.3 85 83.5
HanXRQChr09g0250621 Helianthus annuus HOM05D003430 ORTHO05D004809 5.5e-29 131.0 93 75.3
Gohir.D01G117000 Gossypium hirsutum HOM05D003430 ORTHO05D004809 7.1e-29 130.6 94 73.4
BolC1t03462H Brassica oleracea HOM05D003430 ORTHO05D004809 9.3e-29 130.2 83 80.7
VMungo0044G0002 Vigna mungo HOM05D003430 ORTHO05D004809 4.6e-28 127.9 74 89.2
HanXRQChr11g0335401 Helianthus annuus HOM05D003430 ORTHO05D004809 6.0e-28 127.5 93 72.0
Sopen11g022460 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-27 126.7 76 86.8
arahy.Tifrunner.gnm1.ann1.ABQ8F7 Arachis hypogaea HOM05D003430 ORTHO05D004809 2.1e-25 119.0 74 83.8
arahy.Tifrunner.gnm1.ann1.CY2VCK Arachis hypogaea HOM05D003430 ORTHO05D004809 2.1e-25 119.0 74 83.8
Sp3g25650 Schrenkiella parvula HOM05D003430 ORTHO05D004809 2.4e-24 115.5 73 80.8
Thhalv10002931m.g Eutrema salsugineum HOM05D003430 ORTHO05D004809 2.6e-23 112.1 77 75.3
AT2G07815 Arabidopsis thaliana HOM05D003430 ORTHO05D004809 3.4e-23 111.7 73 78.1
BraSC54t46375Z Brassica rapa HOM05D003430 ORTHO05D004809 3.4e-23 111.7 73 78.1
BraSC77t46627Z Brassica rapa HOM05D003430 ORTHO05D004809 3.4e-23 111.7 73 78.1
arahy.Tifrunner.gnm1.ann1.087TPC Arachis hypogaea HOM05D003430 ORTHO05D004809 3.2e-21 105.1 83 71.1
Nitab4.5_0000172g0240 Nicotiana tabacum HOM05D003430 ORTHO05D004809 2.7e-20 102.1 63 82.5
SHI20516 Sapria himalayana HOM05D003430 ORTHO05D004809 2.3e-19 99.0 75 66.7
Medtr8g091515 Medicago truncatula HOM05D003430 ORTHO05D004809 1.1e-18 96.7 62 77.4
Nn044s41806 Nelumbo nucifera HOM05D003430 ORTHO05D004809 1.1e-18 96.7 56 83.9
Nitab4.5_0001127g0210 Nicotiana tabacum HOM05D003430 ORTHO05D004809 2.2e-17 92.4 80 67.5
SHI33655 Sapria himalayana HOM05D003430 ORTHO05D004809 9.0e-16 87.0 92 55.4
GSVIVG01031933001 Vitis vinifera HOM05D003430 ORTHO05D004809 8.5e-14 80.5 63 60.3
Ciclev10017542m.g Citrus clementina HOM05D003430 ORTHO05D004809 3.2e-13 78.6 46 80.4
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 4.6e-12 74.7 93 50.5
SHI32117 Sapria himalayana HOM05D003430 ORTHO05D004809 5.1e-11 71.2 62 62.9
TPR.G457 Trifolium pratense HOM05D003430 ORTHO05D004809 1.8e-08 62.8 47 68.1
Medtr5g068830 Medicago truncatula HOM05D003430 ORTHO05D004809 5.3e-08 61.2 47 66.0
Solyc00g500167.1 Solanum lycopersicum HOM05D001426 ORTHO05D001389 3.8e-06 55.1 33 75.8
Nitab4.5_0003945g0010 Nicotiana tabacum HOM05D003430 ORTHO05D004809 6.5e-06 54.3 59 52.5


User provided reference genes

Program Settings