Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G00504 Aquilegia oxysepala HOM05D000243 ORTHO05D000541 1.3e-159 566.2 276 100.0
Aqoxy4G02681 Aquilegia oxysepala HOM05D000727 ORTHO05D000541 5.3e-15 85.9 287 27.9
Aqoxy4G00506 Aquilegia oxysepala HOM05D000727 ORTHO05D000541 1.3e-13 81.3 96 46.9
Aqoxy4G00501 Aquilegia oxysepala HOM05D000243 ORTHO05D077803 8.5e-13 78.6 132 36.4
Aqoxy4G00505 Aquilegia oxysepala HOM05D000243 ORTHO05D000541 9.4e-12 75.1 186 30.6
Aqoxy1G01415 Aquilegia oxysepala HOM05D000243 ORTHO05D000541 5.7e-09 65.9 47 61.7
Lalb_Chr05g0220351 Lupinus albus HOM05D000243 ORTHO05D000278 9.8e-09 65.1 277 22.4
PSO210G5402 Papaver somniferum HOM05D000243 ORTHO05D050191 9.8e-09 65.1 60 45.0
FAN04G2045 Fragaria x ananassa HOM05D000243 ORTHO05D000278 1.7e-08 64.3 278 25.9
Peaxi162Scf00171g00086 Petunia axillaris HOM05D000243 ORTHO05D000278 2.8e-08 63.5 135 28.9
Sed0014473 Sechium edule HOM05D000243 ORTHO05D000278 2.8e-08 63.5 127 29.1
Lalb_Chr09g0329271 Lupinus albus HOM05D000243 ORTHO05D000278 6.3e-08 62.4 280 24.6
RcHm_v2.0_Chr7g0177751 Rosa chinensis HOM05D000243 ORTHO05D000278 6.3e-08 62.4 277 23.1
FvH4_5g17830 Fragaria vesca HOM05D000243 ORTHO05D000278 8.3e-08 62.0 277 24.2
Sabra15G0026900 Salix brachista HOM05D000243 ORTHO05D000278 8.3e-08 62.0 129 29.5
FAN08G3149 Fragaria x ananassa HOM05D000243 ORTHO05D000278 1.4e-07 61.2 275 23.3
FAN13G0127 Fragaria x ananassa HOM05D000243 ORTHO05D000278 1.4e-07 61.2 277 23.8
FAN18G3717 Fragaria x ananassa HOM05D000243 ORTHO05D000278 1.8e-07 60.8 277 23.8
EL10Ac2g02988 Beta vulgaris HOM05D000243 ORTHO05D000278 4.1e-07 59.7 276 24.3
HPP92_016712 Vanilla planifolia HOM05D000243 ORTHO05D000278 5.4e-07 59.3 38 57.9
FAN13G2573 Fragaria x ananassa HOM05D004516 ORTHO05D000278 7.0e-07 58.9 266 24.1
GSVIVG01000386001 Vitis vinifera HOM05D000243 ORTHO05D000278 9.1e-07 58.5 51 45.1
Haze_03656 Corylus avellana HOM05D000727 ORTHO05D000541 1.2e-06 58.2 76 43.4
Haze_03662 Corylus avellana HOM05D000727 ORTHO05D000541 1.2e-06 58.2 76 43.4
Nn1g06430 Nelumbo nucifera HOM05D000243 ORTHO05D001390 1.2e-06 58.2 41 61.0
Nn3g18473 Nelumbo nucifera HOM05D000243 ORTHO05D000278 1.2e-06 58.2 39 59.0
ATR0564G521 Amborella trichopoda HOM05D000243 ORTHO05D000278 1.6e-06 57.8 145 27.6
HPP92_027163 Vanilla planifolia HOM05D000243 ORTHO05D000278 1.6e-06 57.8 37 59.5
ECA238G0707 Erigeron canadensis HOM05D000243 ORTHO05D000278 2.7e-06 57.0 269 21.9
HanXRQChr13g0417961 Helianthus annuus HOM05D000727 ORTHO05D000541 2.7e-06 57.0 93 39.8
MD06G1234500 Malus domestica HOM05D000243 ORTHO05D000278 2.7e-06 57.0 47 48.9
Ciclev10002782m.g Citrus clementina HOM05D000727 ORTHO05D000541 3.5e-06 56.6 65 49.2
Lj2g0024695 Lotus japonicus HOM05D000243 ORTHO05D000278 3.5e-06 56.6 150 24.7
MBI19_g39068_MAGBIO Magnolia biondii HOM05D000243 ORTHO05D000278 3.5e-06 56.6 128 30.5
Nn4g24565 Nelumbo nucifera HOM05D000243 ORTHO05D000278 3.5e-06 56.6 38 55.3
Nitab4.5_0003309g0010 Nicotiana tabacum HOM05D000243 ORTHO05D000278 3.5e-06 56.6 126 27.8
Os09g0551600 Oryza sativa ssp. japonica HOM05D000727 ORTHO05D000541 3.5e-06 56.6 92 33.7
Sc11g0001940 Simmondsia chinensis HOM05D000243 ORTHO05D000278 3.5e-06 56.6 134 28.4
Zm00001eb320870 Zea mays HOM05D000727 ORTHO05D000541 3.5e-06 56.6 93 32.3
CAN.G354.15 Capsicum annuum HOM05D000727 ORTHO05D000541 4.5e-06 56.2 65 49.2
Actinidia36010 Actinidia chinensis HOM05D000243 ORTHO05D000278 5.9e-06 55.8 70 41.4
Dinv31958 Davidia involucrata HOM05D000727 ORTHO05D000541 5.9e-06 55.8 58 51.7
Eucgr.J02535 Eucalyptus grandis HOM05D000727 ORTHO05D000541 5.9e-06 55.8 76 46.1
HanXRQChr09g0265361 Helianthus annuus HOM05D000243 ORTHO05D000278 5.9e-06 55.8 78 34.6
Lj2P499T18 Lonicera japonica HOM05D000727 ORTHO05D000541 5.9e-06 55.8 66 47.0
Oeu032152.1 Olea europaea HOM05D000243 ORTHO05D000278 5.9e-06 55.8 111 28.8
MSTRG.3629 Avicennia marina HOM05D000727 ORTHO05D000541 7.7e-06 55.5 53 47.2
Manes.05G101300 Manihot esculenta HOM05D000243 ORTHO05D000278 7.7e-06 55.5 93 32.3


User provided reference genes

Program Settings