Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G00327 Aquilegia oxysepala HOM05D005210 ORTHO05D010080 1.2e-115 419.9 209 100.0
TPR.G32363 Trifolium pratense HOM05D005210 ORTHO05D010080 1.1e-47 194.1 208 49.0
Medtr6g012880 Medicago truncatula HOM05D005210 ORTHO05D010080 3.1e-47 192.6 211 49.3
TPR.G22447 Trifolium pratense HOM05D005210 ORTHO05D010080 5.2e-47 191.8 214 48.6
AUR62004733 Chenopodium quinoa HOM05D005210 ORTHO05D010080 9.9e-46 187.6 212 48.6
AUR62037526 Chenopodium quinoa HOM05D005210 ORTHO05D010080 9.9e-46 187.6 212 48.6
Lj6g0026306 Lotus japonicus HOM05D005210 ORTHO05D010080 9.9e-46 187.6 214 48.1
Lsat_1_v5_gn_7_109460 Lactuca sativa HOM05D005210 ORTHO05D010080 8.4e-45 184.5 205 50.2
Atru.chr1.3624 Acer truncatum HOM05D005210 ORTHO05D010080 7.1e-44 181.4 210 49.5
CANSAT78G1777 Cannabis sativa HOM05D005210 ORTHO05D010080 2.7e-43 179.5 211 48.3
SalBow8G1406 Salvia bowleyana HOM05D005210 ORTHO05D010080 1.7e-42 176.8 209 48.8
Nitab4.5_0000299g0070 Nicotiana tabacum HOM05D005210 ORTHO05D010080 3.0e-42 176.0 204 47.1
SGA_v2.0_scaffold119G32726 Striga asiatica HOM05D005210 ORTHO05D010080 5.1e-42 175.3 203 47.8
SGA_v2.0_scaffold167G38415 Striga asiatica HOM05D005210 ORTHO05D010080 8.7e-42 174.5 202 47.5
Migut.B01305 Erythranthe guttata HOM05D005210 ORTHO05D010080 1.5e-41 173.7 208 45.7
Oeu020894.1 Olea europaea HOM05D005210 ORTHO05D010080 1.5e-41 173.7 209 47.8
Gorai.011G233600 Gossypium raimondii HOM05D005210 ORTHO05D010080 1.9e-41 173.3 215 48.8
MSTRG.20585 Avicennia marina HOM05D005210 ORTHO05D010080 2.5e-41 172.9 202 46.5
Gohir.A10G199900 Gossypium hirsutum HOM05D005210 ORTHO05D010080 4.3e-41 172.2 215 47.9
Gohir.D10G207900 Gossypium hirsutum HOM05D005210 ORTHO05D010080 5.6e-41 171.8 215 48.4
ECA236G2402 Erigeron canadensis HOM05D005210 ORTHO05D010080 7.3e-41 171.4 213 44.6
Gohir.A10G200000 Gossypium hirsutum HOM05D005210 ORTHO05D010080 7.3e-41 171.4 215 47.4
PGR069G0003 Punica granatum HOM05D005210 ORTHO05D010080 7.3e-41 171.4 217 46.1
Ciclev10012798m.g Citrus clementina HOM05D005210 ORTHO05D010080 2.1e-40 169.9 213 47.4
CAN.G787.10 Capsicum annuum HOM05D005210 ORTHO05D010080 3.6e-40 169.1 212 47.2
Nn1g09997 Nelumbo nucifera HOM05D005210 ORTHO05D010080 3.6e-40 169.1 211 45.0
Nn1g10098 Nelumbo nucifera HOM05D005210 ORTHO05D010080 3.6e-40 169.1 211 45.0
DCAR_032434 Daucus carota HOM05D005210 ORTHO05D010080 6.2e-40 168.3 202 44.6
Ah.03g133380 Amaranthus hybridus HOM05D005210 ORTHO05D010080 1.2e-38 164.1 211 45.0
Phvul.005G088636 Phaseolus vulgaris HOM05D005210 ORTHO05D010080 1.7e-37 160.2 215 42.8
unitig_750.g28447 Utricularia gibba HOM05D005210 ORTHO05D010080 1.7e-34 150.2 203 41.9
Nitab4.5_0001788g0200 Nicotiana tabacum HOM05D001750 ORTHO05D001825 1.1e-33 147.5 204 41.7
Actinidia34888 Actinidia chinensis HOM05D005210 ORTHO05D010080 5.6e-33 145.2 191 43.5
MBI04_g15069_MAGBIO Magnolia biondii HOM05D005210 ORTHO05D010080 2.1e-32 143.3 195 42.6
Cpa.g.sc38.57 Carica papaya HOM05D005210 ORTHO05D010080 6.2e-32 141.7 191 42.9
Nitab4.5_0006085g0020 Nicotiana tabacum HOM05D005210 ORTHO05D010080 6.2e-32 141.7 209 39.7
Nitab4.5_0001761g0130 Nicotiana tabacum HOM05D005210 ORTHO05D010080 1.1e-31 141.0 175 46.3
VMungo0329G0007 Vigna mungo HOM05D005210 ORTHO05D010080 3.1e-31 139.4 185 44.9
MELO3C028549.2 Cucumis melo HOM05D005210 ORTHO05D010080 6.9e-31 138.3 171 44.4
RcHm_v2.0_Chr2g0148221 Rosa chinensis HOM05D005210 ORTHO05D010080 1.5e-30 137.1 120 58.3
RcHm_v2.0_MTg0498311 Rosa chinensis HOM05D005210 ORTHO05D010080 1.5e-30 137.1 150 50.0
SEGI_01777 Sequoiadendron giganteum HOM05D005210 ORTHO05D010080 3.4e-30 136.0 223 41.3
Cfa023010 Carpinus fangiana HOM05D005210 ORTHO05D010080 5.8e-30 135.2 182 43.4
arahy.Tifrunner.gnm1.ann1.00SNP9 Arachis hypogaea HOM05D005210 ORTHO05D010080 1.7e-29 133.7 190 41.6
arahy.Tifrunner.gnm1.ann1.883WGW Arachis hypogaea HOM05D005210 ORTHO05D010080 1.7e-29 133.7 190 41.6
arahy.Tifrunner.gnm1.ann1.QPLA3G Arachis hypogaea HOM05D005210 ORTHO05D010080 3.2e-28 129.4 193 40.4
Potri.007G062102 Populus trichocarpa HOM05D005210 ORTHO05D010080 3.2e-28 129.4 216 41.2
Lalb_Chr03g0038991 Lupinus albus HOM05D005210 ORTHO05D010080 9.3e-28 127.9 189 41.3
Dinv06682 Davidia involucrata HOM05D005210 ORTHO05D010080 4.6e-27 125.6 171 43.3
CAN.G1109.4 Capsicum annuum HOM05D005210 ORTHO05D010080 1.8e-26 123.6 150 47.3
Lalb_Chr02g0153671 Lupinus albus HOM05D005210 ORTHO05D010080 3.0e-26 122.9 182 41.2
CAN.G110.12 Capsicum annuum HOM05D005210 ORTHO05D010080 1.5e-25 120.6 150 46.0
GSVIVG01004978001 Vitis vinifera HOM05D005210 ORTHO05D010080 2.5e-25 119.8 111 55.9
Ca_15051_v3 Cicer arietinum L. HOM05D001750 ORTHO05D010080 4.3e-25 119.0 164 44.5
Oeu061104.1 Olea europaea HOM05D000700 ORTHO05D010080 3.7e-24 115.9 117 53.0
Peaxi162Scf01267g00005 Petunia axillaris HOM05D005210 ORTHO05D010080 1.2e-22 110.9 95 57.9
Nitab4.5_0000172g0080 Nicotiana tabacum HOM05D001750 ORTHO05D001825 1.0e-21 107.8 169 39.1
Nitab4.5_0003632g0030 Nicotiana tabacum HOM05D005210 ORTHO05D034847 1.7e-21 107.1 91 57.1
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 2.2e-21 106.7 131 43.5
Ca_22167_v3 Cicer arietinum L. HOM05D001750 ORTHO05D001825 8.4e-21 104.8 140 45.7
Ca_22168_v3 Cicer arietinum L. HOM05D001750 ORTHO05D001825 8.4e-21 104.8 140 45.7
Ca_22173_v3 Cicer arietinum L. HOM05D005210 ORTHO05D010080 8.4e-21 104.8 140 45.7
PGSC0003DMG400020779 Solanum tuberosum HOM05D005210 ORTHO05D010080 1.4e-20 104.0 101 54.5
RcHm_v2.0_Chr2g0148231 Rosa chinensis HOM05D005210 ORTHO05D010080 5.0e-13 79.0 71 54.9
Lalb_Chr17g0337341 Lupinus albus HOM05D005210 ORTHO05D010080 7.1e-12 75.1 69 56.5
Hma1.2p1_0038F.1_g024120 Hydrangea macrophylla HOM05D005210 ORTHO05D010080 9.3e-12 74.7 62 58.1
Migut.B01023 Erythranthe guttata HOM05D005210 ORTHO05D010080 1.6e-11 73.9 183 33.9
Peaxi162Scf01462g00001 Petunia axillaris HOM05D005210 ORTHO05D010080 6.1e-11 72.0 105 43.8
CAN.G85.22 Capsicum annuum HOM05D002660 ORTHO05D003902 1.3e-10 70.9 104 44.2
Ciclev10017151m.g Citrus clementina HOM05D005210 ORTHO05D010080 3.9e-10 69.3 87 46.0
Nitab4.5_0001152g0440 Nicotiana tabacum HOM05D005210 ORTHO05D010080 1.5e-09 67.4 65 49.2
Sed0004476 Sechium edule HOM05D005210 ORTHO05D010080 2.5e-09 66.6 106 38.7
QL04p020150 Quercus lobata HOM05D005210 ORTHO05D010080 3.3e-09 66.2 111 37.8
Lalb_Chr03g0038471 Lupinus albus HOM05D005210 ORTHO05D010080 5.9e-06 55.5 39 61.5
Nitab4.5_0000172g1800 Nicotiana tabacum HOM05D001750 ORTHO05D001825 7.7e-06 55.1 169 29.6


User provided reference genes

Program Settings