Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 1.5e-175 619.4 307 100.0
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 3.4e-95 352.4 285 64.2
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 5.4e-93 345.1 304 62.2
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 7.4e-90 334.7 275 61.8
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 6.9e-88 328.2 329 55.3
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 3.8e-86 322.4 250 64.4
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 1.9e-85 320.1 267 61.0
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 3.2e-85 319.3 237 65.4
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 7.1e-85 318.2 268 59.0
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 1.2e-84 317.4 295 54.6
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 2.1e-84 316.6 315 54.6
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 2.7e-84 316.2 246 62.2
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 3.5e-84 315.8 246 62.2
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 3.5e-84 315.8 315 55.6
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 6.0e-84 315.1 236 66.1
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 1.3e-83 313.9 248 62.5
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 1.8e-83 313.5 309 55.0
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 3.9e-83 312.4 227 68.3
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 6.7e-83 311.6 284 58.8
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 6.7e-83 311.6 239 62.8
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 1.1e-82 310.8 238 63.4
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 1.5e-82 310.5 238 63.4
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 1.5e-82 310.5 238 63.4
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 1.5e-82 310.5 276 56.9
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 1.5e-82 310.5 261 59.0
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 3.3e-82 309.3 233 62.2
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 4.3e-82 308.9 289 56.7
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 5.6e-82 308.5 278 56.5
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 7.4e-82 308.1 245 62.9
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 1.6e-81 307.0 238 62.2
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 1.6e-81 307.0 238 61.8
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 2.8e-81 306.2 243 62.6
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 3.7e-81 305.8 259 59.5
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 4.8e-81 305.4 280 56.4
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 4.8e-81 305.4 226 65.5
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 6.2e-81 305.1 236 62.3
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.1e-80 304.3 238 63.9
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 1.1e-80 304.3 237 60.8
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 1.1e-80 304.3 244 62.3
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 1.4e-80 303.9 300 53.7
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 1.4e-80 303.9 238 63.4
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.4e-80 303.9 238 63.4
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 1.8e-80 303.5 308 53.2
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 1.8e-80 303.5 241 60.2
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 1.8e-80 303.5 239 60.7
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 3.1e-80 302.8 238 63.4
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 5.3e-80 302.0 263 58.6
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 6.9e-80 301.6 324 53.4
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 2.0e-79 300.1 236 61.0
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 3.4e-79 299.3 259 58.3
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 3.4e-79 299.3 259 58.3
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 3.4e-79 299.3 225 62.7
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 4.5e-79 298.9 236 61.9
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 4.5e-79 298.9 243 60.1
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 5.8e-79 298.5 235 62.6
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 5.8e-79 298.5 235 63.0
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 5.8e-79 298.5 332 50.9
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 7.6e-79 298.1 238 62.2
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 1.7e-78 297.0 228 62.7
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 2.2e-78 296.6 236 60.6
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 2.2e-78 296.6 240 61.2
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 3.8e-78 295.8 310 53.2
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 6.5e-78 295.0 237 61.2
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 1.1e-77 294.3 266 57.9
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 1.1e-77 294.3 236 59.7
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 1.9e-77 293.5 242 59.9
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 3.2e-77 292.7 238 60.5
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 3.2e-77 292.7 225 61.8
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 3.2e-77 292.7 244 59.4
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 3.2e-77 292.7 240 61.7
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 5.5e-77 292.0 310 51.6
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 5.5e-77 292.0 244 59.0
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 7.1e-77 291.6 238 60.9
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 9.3e-77 291.2 243 58.8
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 9.3e-77 291.2 238 60.1
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 9.3e-77 291.2 316 50.9
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 9.3e-77 291.2 237 60.8
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 9.3e-77 291.2 224 63.8
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.1e-76 290.0 218 64.2
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 2.1e-76 290.0 224 60.3
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 2.7e-76 289.7 224 61.6
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 3.5e-76 289.3 229 60.7
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 4.6e-76 288.9 237 60.3
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 1.5e-74 283.9 237 58.6
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 2.5e-74 283.1 202 67.8
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 4.3e-74 282.3 301 51.2
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 9.6e-74 281.2 249 58.2
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 4.1e-72 275.8 301 50.5
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 9.0e-72 274.6 225 59.6
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 3.4e-71 272.7 320 47.8
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 7.6e-71 271.6 325 48.3
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 7.6e-71 271.6 325 48.3
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.1e-69 267.7 234 58.5
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 1.4e-69 267.3 232 57.8
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 5.7e-66 255.4 228 54.4
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 1.6e-65 253.8 189 64.0
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 4.8e-65 252.3 322 43.5
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 6.5e-62 241.9 313 45.0
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 5.1e-59 232.3 231 49.8
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 4.5e-55 219.2 164 64.0
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 1.9e-53 213.8 220 52.7
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 6.1e-52 208.8 158 65.8
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 2.4e-48 196.8 203 51.2
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 1.7e-46 190.7 290 40.3
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 7.2e-45 185.3 236 46.6
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 6.1e-44 182.2 143 61.5
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 1.8e-43 180.6 138 65.2
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 1.2e-42 177.9 236 44.5
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 4.8e-41 172.6 233 39.9
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 1.4e-40 171.0 165 54.5
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 2.0e-39 167.2 239 39.7
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 3.5e-39 166.4 136 61.8
FAN10G0955 Fragaria x ananassa HOM05D006509 ORTHO05D008144 9.4e-37 158.3 180 48.3
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 1.6e-36 157.5 161 51.6
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 2.3e-35 153.7 138 55.8
Cpa.g.sc63.3 Carica papaya HOM05D006509 ORTHO05D008144 5.7e-34 149.1 101 70.3
ECA246G0117 Erigeron canadensis HOM05D006509 ORTHO05D008144 2.2e-33 147.1 127 59.8
AUR62018171 Chenopodium quinoa HOM05D006509 ORTHO05D008144 5.4e-32 142.5 98 68.4
Cc00_g35200 Coffea canephora HOM05D006509 ORTHO05D008144 1.3e-30 137.9 88 71.6
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 2.5e-29 133.7 134 50.0
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 4.4e-26 122.9 108 56.5
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 8.0e-20 102.1 171 38.6
FAN01G0805 Fragaria x ananassa HOM05D006509 ORTHO05D008144 7.0e-16 89.0 64 65.6
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 4.7e-12 76.3 74 50.0
Ca_19971_v3 Cicer arietinum L. HOM05D000020 ORTHO05D000156 6.2e-12 75.9 75 50.7


User provided reference genes

Program Settings