Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G00148 Aquilegia oxysepala HOM05D006785 ORTHO05D006259 8.7e-110 400.6 245 100.0
Nn3g20927 Nelumbo nucifera HOM05D006785 ORTHO05D006259 5.4e-19 99.0 317 31.2
Dinv07090 Davidia involucrata HOM05D006785 ORTHO05D006259 1.5e-16 90.9 310 32.3
MBI07_g07832_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 3.1e-14 83.2 241 31.1
MBI10_g42732_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 5.2e-14 82.4 95 57.9
TAR627G0640 Trochodendron aralioides HOM05D006785 ORTHO05D006259 5.8e-13 79.0 137 43.8
Actinidia11204 Actinidia chinensis HOM05D006785 ORTHO05D006259 2.4e-11 73.6 130 41.5
vmacro12460 Vaccinium macrocarpon HOM05D006785 ORTHO05D006259 4.2e-11 72.8 256 30.9
ATR0568G074 Amborella trichopoda HOM05D006785 ORTHO05D006259 7.1e-11 72.0 269 30.1
TAR629G3165 Trochodendron aralioides HOM05D006785 ORTHO05D006259 2.1e-10 70.5 95 49.5
PGR042G2728 Punica granatum HOM05D006785 ORTHO05D006259 3.5e-10 69.7 325 31.1
Rhsim06G0116700 Rhododendron simsii HOM05D006785 ORTHO05D006259 4.6e-10 69.3 260 36.2
PSO675G6378 Papaver somniferum HOM05D006785 ORTHO05D006259 7.8e-10 68.6 85 48.2
Actinidia32516 Actinidia chinensis HOM05D006785 ORTHO05D006259 1.0e-09 68.2 313 29.1
PSO104G0025 Papaver somniferum HOM05D006785 ORTHO05D006259 1.7e-09 67.4 139 37.4
Duzib264G0099 Durio zibethinus HOM05D006785 ORTHO05D006259 3.9e-09 66.2 130 40.0
TAR622G1344 Trochodendron aralioides HOM05D006785 ORTHO05D006259 6.6e-09 65.5 110 44.5
TWI59G0461 Tripterygium wilfordii HOM05D006785 ORTHO05D006259 8.7e-09 65.1 291 31.3
Manes.02G084200 Manihot esculenta HOM05D006785 ORTHO05D006259 1.1e-08 64.7 277 29.6
Eucgr.A01969 Eucalyptus grandis HOM05D006785 ORTHO05D006259 1.5e-08 64.3 138 35.5
CSS0028256 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 3.3e-08 63.2 233 30.5
CSS0047125 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 3.3e-08 63.2 233 30.5
Gohir.A12G079000 Gossypium hirsutum HOM05D006785 ORTHO05D006259 3.3e-08 63.2 91 42.9
THA.LOC104800823 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 3.3e-08 63.2 124 37.9
Gohir.D12G068400 Gossypium hirsutum HOM05D006785 ORTHO05D006259 7.3e-08 62.0 91 42.9
Gorai.008G098200 Gossypium raimondii HOM05D006785 ORTHO05D006259 9.6e-08 61.6 91 42.9
Thecc.01G161700 Theobroma cacao HOM05D006785 ORTHO05D006259 1.3e-07 61.2 106 43.4
HanXRQChr08g0227971 Helianthus annuus HOM05D009485 ORTHO05D006259 2.1e-07 60.5 113 40.7
DCAR_013314 Daucus carota HOM05D006785 ORTHO05D006259 2.8e-07 60.1 208 29.8
Hma1.2p1_0960F.1_g241635 Hydrangea macrophylla HOM05D006785 ORTHO05D006259 3.6e-07 59.7 216 28.7
Carub.0001s0590 Capsella rubella HOM05D006785 ORTHO05D006259 4.8e-07 59.3 123 37.4
Manes.01G127500 Manihot esculenta HOM05D006785 ORTHO05D006259 6.2e-07 58.9 276 29.3
Sed0020726 Sechium edule HOM05D006785 ORTHO05D006259 6.2e-07 58.9 131 38.2
ECA233G1175 Erigeron canadensis HOM05D009485 ORTHO05D006259 8.1e-07 58.5 141 36.9
PSO541G2000 Papaver somniferum HOM05D006785 ORTHO05D006259 1.8e-06 57.4 256 34.4
Migut.M00503 Erythranthe guttata HOM05D009485 ORTHO05D006259 3.1e-06 56.6 115 38.3
Peaxi162Scf00035g00291 Petunia axillaris HOM05D009485 ORTHO05D006259 3.1e-06 56.6 213 27.7
Gohir.A05G378800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 5.3e-06 55.8 108 41.7
Gohir.D04G036800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 5.3e-06 55.8 108 41.7
Gorai.012G041600 Gossypium raimondii HOM05D006785 ORTHO05D006259 5.3e-06 55.8 108 41.7


User provided reference genes

Program Settings