Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G00105 Aquilegia oxysepala HOM05D005716 ORTHO05D007885 8.1e-152 540.4 283 100.0
Atru.chr10.1272 Acer truncatum HOM05D005716 ORTHO05D007885 7.4e-137 490.7 257 91.8
MD10G1263700 Malus domestica HOM05D005716 ORTHO05D007885 7.4e-137 490.7 251 94.4
Ciclev10016173m.g Citrus clementina HOM05D005716 ORTHO05D007885 1.6e-136 489.6 284 87.0
PGSC0003DMG400008287 Solanum tuberosum HOM05D005716 ORTHO05D007885 4.8e-136 488.0 285 89.8
QL05p058825 Quercus lobata HOM05D005716 ORTHO05D007885 1.1e-135 486.9 253 91.7
Nitab4.5_0005219g0060 Nicotiana tabacum HOM05D005716 ORTHO05D007885 1.8e-135 486.1 283 86.6
Peaxi162Scf00022g00310 Petunia axillaris HOM05D005716 ORTHO05D007885 1.8e-135 486.1 251 92.0
QL05p058849 Quercus lobata HOM05D005716 ORTHO05D007885 2.4e-135 485.7 253 91.7
Sopen02g019750 Solanum pennellii HOM05D005716 ORTHO05D007885 2.4e-135 485.7 283 89.0
Lj1A1186G50 Lonicera japonica HOM05D005716 ORTHO05D007885 5.3e-135 484.6 251 92.8
RcHm_v2.0_Chr5g0013751 Rosa chinensis HOM05D005716 ORTHO05D007885 5.3e-135 484.6 251 92.8
Eucgr.E02383 Eucalyptus grandis HOM05D005716 ORTHO05D007885 6.9e-135 484.2 249 92.8
PGR042G3684 Punica granatum HOM05D005716 ORTHO05D007885 1.5e-134 483.0 254 91.3
Thecc.06G152400 Theobroma cacao HOM05D005716 ORTHO05D007885 1.5e-134 483.0 285 89.1
TAR627G0480 Trochodendron aralioides HOM05D005716 ORTHO05D007885 1.5e-134 483.0 289 87.9
Ca_18267_v3 Cicer arietinum L. HOM05D005716 ORTHO05D007885 2.0e-134 482.6 255 90.6
Eucgr.E02408 Eucalyptus grandis HOM05D005716 ORTHO05D007885 2.0e-134 482.6 249 92.4
CiPaw.09G125500 Carya illinoinensis HOM05D005716 ORTHO05D007885 2.6e-134 482.3 253 90.5
Actinidia07685 Actinidia chinensis HOM05D005716 ORTHO05D007885 3.4e-134 481.9 286 89.2
MBI07_g26370_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 3.4e-134 481.9 257 91.4
CAN.G650.23 Capsicum annuum HOM05D005716 ORTHO05D007885 4.5e-134 481.5 254 90.9
Sabra02G0185400 Salix brachista HOM05D005716 ORTHO05D007885 4.5e-134 481.5 283 87.6
Solyc02g070670.4 Solanum lycopersicum HOM05D005716 ORTHO05D007885 4.5e-134 481.5 283 86.9
Rhsim07G0173200 Rhododendron simsii HOM05D005716 ORTHO05D007885 5.9e-134 481.1 261 90.4
MBI07_g15285_MAGBIO Magnolia biondii HOM05D005716 ORTHO05D007885 7.6e-134 480.7 257 91.1
Nn3g20701 Nelumbo nucifera HOM05D005716 ORTHO05D007885 7.6e-134 480.7 251 90.8
MD05G1285700 Malus domestica HOM05D005716 ORTHO05D007885 1.0e-133 480.3 250 93.2
Manes.17G068800 Manihot esculenta HOM05D005716 ORTHO05D007885 1.0e-133 480.3 283 87.3
Potri.002G243500 Populus trichocarpa HOM05D005716 ORTHO05D007885 1.0e-133 480.3 283 87.6
EL10Ac8g19740 Beta vulgaris HOM05D005716 ORTHO05D007885 1.3e-133 479.9 255 89.8
Lalb_Chr07g0188621 Lupinus albus HOM05D005716 ORTHO05D007885 1.3e-133 479.9 250 92.4
TWI09G1196 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 1.3e-133 479.9 251 91.2
GSVIVG01021429001 Vitis vinifera HOM05D005716 ORTHO05D007885 1.3e-133 479.9 256 88.7
CANSAT80G0786 Cannabis sativa HOM05D005716 ORTHO05D007885 1.7e-133 479.6 249 93.2
DCAR_005122 Daucus carota HOM05D005716 ORTHO05D007885 2.2e-133 479.2 251 91.6
Duzib235G0716 Durio zibethinus HOM05D005716 ORTHO05D007885 2.2e-133 479.2 251 90.8
CsaV3_1G032590 Cucumis sativus L. HOM05D005716 ORTHO05D007885 2.9e-133 478.8 250 92.0
FvH4_3g05780 Fragaria vesca HOM05D005716 ORTHO05D007885 5.0e-133 478.0 251 91.6
FAN11G1575 Fragaria x ananassa HOM05D005716 ORTHO05D007885 5.0e-133 478.0 251 91.6
FAN21G0047 Fragaria x ananassa HOM05D005716 ORTHO05D007885 5.0e-133 478.0 251 91.6
AUR62027525 Chenopodium quinoa HOM05D005716 ORTHO05D007885 6.5e-133 477.6 244 93.4
HanXRQChr08g0230021 Helianthus annuus HOM05D005716 ORTHO05D007885 6.5e-133 477.6 250 92.8
Potri.002G243700 Populus trichocarpa HOM05D005716 ORTHO05D007885 6.5e-133 477.6 283 87.3
arahy.Tifrunner.gnm1.ann1.MD42KV Arachis hypogaea HOM05D005716 ORTHO05D007885 1.9e-132 476.1 254 89.8
Gohir.D10G040400 Gossypium hirsutum HOM05D005716 ORTHO05D007885 1.9e-132 476.1 283 88.7
CDE02G4127 Ceratophyllum demersum HOM05D005716 ORTHO05D007885 2.5e-132 475.7 279 87.5
FAN16G2159 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.5e-132 475.7 251 91.2
SalBow7G1512 Salvia bowleyana HOM05D005716 ORTHO05D007885 2.5e-132 475.7 249 91.2
SGA_v2.0_scaffold106G30642 Striga asiatica HOM05D005716 ORTHO05D007885 2.5e-132 475.7 283 82.3
arahy.Tifrunner.gnm1.ann1.16PV68 Arachis hypogaea HOM05D005716 ORTHO05D007885 3.2e-132 475.3 251 90.4
BcaB06g28772 Brassica carinata HOM05D005716 ORTHO05D007885 3.2e-132 475.3 255 88.6
COL.COLO4_31094 Corchorus olitorius HOM05D005716 ORTHO05D007885 4.2e-132 474.9 251 90.0
AL4G30440 Arabidopsis lyrata HOM05D005716 ORTHO05D007885 5.5e-132 474.6 257 88.7
Gorai.011G042600 Gossypium raimondii HOM05D005716 ORTHO05D007885 5.5e-132 474.6 250 91.2
Prupe.4G079000 Prunus persica HOM05D005716 ORTHO05D007885 5.5e-132 474.6 255 90.2
C04p63810 Brassica napus HOM05D005716 ORTHO05D007885 7.2e-132 474.2 255 88.2
BraA04t18144Z Brassica rapa HOM05D005716 ORTHO05D007885 7.2e-132 474.2 255 88.2
unitig_32.g11441 Utricularia gibba HOM05D005716 ORTHO05D007885 7.2e-132 474.2 248 89.9
TPR.G4903 Trifolium pratense HOM05D005716 ORTHO05D007885 9.3e-132 473.8 251 90.0
CARHR128550 Cardamine hirsuta HOM05D005716 ORTHO05D007885 1.2e-131 473.4 257 88.3
ECA232G4567 Erigeron canadensis HOM05D005716 ORTHO05D007885 1.2e-131 473.4 251 90.8
PSO017G0333 Papaver somniferum HOM05D005716 ORTHO05D007885 1.6e-131 473.0 246 92.7
BolC4t27848H Brassica oleracea HOM05D005716 ORTHO05D007885 2.1e-131 472.6 253 88.5
Medtr4g096770 Medicago truncatula HOM05D005716 ORTHO05D007885 2.1e-131 472.6 249 90.4
AT2G34470 Arabidopsis thaliana HOM05D005716 ORTHO05D007885 2.7e-131 472.2 257 87.9
Aa31LG10G6910 Aethionema arabicum HOM05D005716 ORTHO05D007885 3.6e-131 471.9 253 88.9
ATR0585G042 Amborella trichopoda HOM05D005716 ORTHO05D007885 3.6e-131 471.9 250 91.2
Lsat_1_v5_gn_1_96721 Lactuca sativa HOM05D005716 ORTHO05D007885 4.6e-131 471.5 257 89.9
Oeu030916.2 Olea europaea HOM05D005716 ORTHO05D007885 4.6e-131 471.5 301 83.4
Cc09_g09370 Coffea canephora HOM05D005716 ORTHO05D007885 6.1e-131 471.1 283 85.2
Dinv32271 Davidia involucrata HOM05D005716 ORTHO05D007885 6.1e-131 471.1 257 89.5
Thhalv10017058m.g Eutrema salsugineum HOM05D005716 ORTHO05D007885 6.1e-131 471.1 255 89.0
Carub.0004s1614 Capsella rubella HOM05D005716 ORTHO05D007885 7.9e-131 470.7 283 82.3
TWI09G0986 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 1.3e-130 469.9 277 87.0
Psat7g090160 Pisum sativum HOM05D005716 ORTHO05D007885 1.8e-130 469.5 247 89.9
Sc05g0006370 Simmondsia chinensis HOM05D005716 ORTHO05D007885 1.8e-130 469.5 250 88.8
Migut.H01369 Erythranthe guttata HOM05D005716 ORTHO05D007885 2.3e-130 469.2 246 90.7
THA.LOC104812667 Tarenaya hassleriana HOM05D005716 ORTHO05D007885 2.3e-130 469.2 257 87.5
MSTRG.13250 Avicennia marina HOM05D005716 ORTHO05D007885 3.9e-130 468.4 249 88.8
Glyma.08G084800 Glycine max HOM05D005716 ORTHO05D007885 6.7e-130 467.6 251 88.8
Sp4g16740 Schrenkiella parvula HOM05D005716 ORTHO05D007885 8.7e-130 467.2 250 88.4
SEGI_04817 Sequoiadendron giganteum HOM05D005716 ORTHO05D007885 1.1e-129 466.8 251 89.2
TWI53G0431 Tripterygium wilfordii HOM05D005716 ORTHO05D007885 4.3e-129 464.9 245 90.6
Phvul.002G193800 Phaseolus vulgaris HOM05D005716 ORTHO05D007885 1.3e-128 463.4 251 88.8
VMungo0251G2847 Vigna mungo HOM05D005716 ORTHO05D007885 1.3e-128 463.4 253 87.7
HPP92_010050 Vanilla planifolia HOM05D005716 ORTHO05D007885 5.3e-127 458.0 250 86.8
PSO478G1410 Papaver somniferum HOM05D005716 ORTHO05D007885 4.5e-126 454.9 248 89.5
Sed0010647 Sechium edule HOM05D005716 ORTHO05D007885 1.0e-125 453.8 250 88.0
Mapoly0128s0016 Marchantia polymorpha HOM05D005716 ORTHO05D007885 2.3e-122 442.6 248 85.5
Os05g0565200 Oryza sativa ssp. japonica HOM05D005716 ORTHO05D007885 8.8e-122 440.7 257 84.0
vmacro17882 Vaccinium macrocarpon HOM05D005716 ORTHO05D007885 9.7e-121 437.2 356 66.3
Cpa.g.sc166.24 Carica papaya HOM05D005716 ORTHO05D007885 1.4e-119 433.3 263 82.5
Zm00001eb343840 Zea mays HOM05D005716 ORTHO05D007885 4.1e-119 431.8 228 91.2
MELO3C002721.2 Cucumis melo HOM05D005716 ORTHO05D007885 6.9e-119 431.0 223 93.3
ClCG03G007040 Citrullus lanatus HOM05D005716 ORTHO05D007885 2.6e-118 429.1 250 84.4
Pp3c24_19130 Physcomitrium patens HOM05D005716 ORTHO05D007885 2.2e-117 426.0 239 83.3
SMO353G0068 Selaginella moellendorffii HOM05D005716 ORTHO05D007885 2.2e-117 426.0 255 80.8
AagrBONN_evm.TU.Sc2ySwM_117.3588 Anthoceros agrestis HOM05D005716 ORTHO05D007885 6.1e-115 417.9 242 82.2
CBR_g38955 Chara braunii HOM05D005716 ORTHO05D007885 1.4e-111 406.8 251 76.9
CSS0037137 Camellia sinensis var. sinensis HOM05D005716 ORTHO05D007885 3.6e-107 392.1 224 86.2
Haze_05577 Corylus avellana HOM05D005716 ORTHO05D007885 3.6e-99 365.5 191 93.7
Hma1.2p1_0286F.1_g114150 Hydrangea macrophylla HOM05D005716 ORTHO05D007885 4.4e-97 358.6 189 93.7
MCO04G141 Micromonas commoda HOM05D005716 ORTHO05D007885 2.5e-92 342.8 243 68.7
RcHm_v2.0_Chr5g0013741 Rosa chinensis HOM05D005716 ORTHO05D007885 5.7e-89 331.6 171 94.2
Nitab4.5_0001655g0090 Nicotiana tabacum HOM05D005716 ORTHO05D007885 1.3e-88 330.5 171 93.6
PSO017G6742 Papaver somniferum HOM05D005716 ORTHO05D007885 4.9e-88 328.6 168 95.8
Hund21524 Selenicereus undatus HOM05D005716 ORTHO05D007885 1.3e-85 320.5 181 87.8
Gohir.A10G039600 Gossypium hirsutum HOM05D005716 ORTHO05D007885 6.6e-85 318.2 195 88.2
A04p06350 Brassica napus HOM05D005716 ORTHO05D007885 1.5e-81 307.0 183 83.1
PRCOL_00002216 Prasinoderma coloniale HOM05D005716 ORTHO05D007885 1.1e-76 290.8 185 75.7
FAN17G1884 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.3e-74 283.1 164 86.0
FAN23G0273 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.6e-73 279.6 164 83.5
FAN25G2810 Fragaria x ananassa HOM05D005716 ORTHO05D007885 2.6e-73 279.6 164 85.4
BcaC02g09191 Brassica carinata HOM05D005716 ORTHO05D031863 5.8e-73 278.5 145 94.5
FAN25G0382 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.3e-69 267.3 173 76.9
C04p39880 Brassica napus HOM05D005716 ORTHO05D007885 1.7e-69 266.9 147 89.1
AUR62030221 Chenopodium quinoa HOM05D005716 ORTHO05D007885 3.0e-69 266.2 146 84.9
BolC4t25559H Brassica oleracea HOM05D005716 ORTHO05D007885 8.6e-69 264.6 155 85.2
FAN02G1132 Fragaria x ananassa HOM05D005716 ORTHO05D007885 9.5e-68 261.2 213 66.2
BraA04t16339Z Brassica rapa HOM05D005716 ORTHO05D007885 1.2e-67 260.8 155 83.9
RcHm_v2.0_Chr5g0013721 Rosa chinensis HOM05D005716 ORTHO05D007885 8.9e-66 254.6 156 80.8
RcHm_v2.0_Chr5g0013731 Rosa chinensis HOM05D005716 ORTHO05D007885 8.6e-61 238.0 148 80.4
Haze_26810 Corylus avellana HOM05D005716 ORTHO05D164461 7.8e-54 214.9 190 56.3
Dinv30725 Davidia involucrata HOM05D005716 ORTHO05D007885 5.1e-53 212.2 141 76.6
FAN02G0019 Fragaria x ananassa HOM05D005716 ORTHO05D007885 1.9e-52 210.3 151 72.8
AUR62030223 Chenopodium quinoa HOM05D005716 ORTHO05D044022 4.5e-41 172.6 167 58.7
MSTRG.14769 Avicennia marina HOM05D005716 ORTHO05D007885 4.9e-40 169.1 93 86.0
FAN08G0336 Fragaria x ananassa HOM05D005716 ORTHO05D044022 1.4e-31 141.0 76 92.1
Dinv30726 Davidia involucrata HOM05D005716 ORTHO05D014961 5.1e-29 132.5 92 75.0
arahy.Tifrunner.gnm1.ann1.8LN2Z6 Arachis hypogaea HOM05D005716 ORTHO05D087704 7.4e-28 128.6 132 56.1
VMungo1309G0118 Vigna mungo HOM05D005716 ORTHO05D437644 3.1e-26 123.2 71 83.1
CAN.G94.3 Capsicum annuum HOM05D005716 ORTHO05D115662 1.5e-25 120.9 93 65.6
C05p14270 Brassica napus HOM05D013073 ORTHO05D014961 4.5e-17 92.8 55 74.5
C06p00300 Brassica napus HOM05D013073 ORTHO05D014961 1.3e-16 91.3 55 72.7
BcaC08g42818 Brassica carinata HOM05D013073 ORTHO05D014961 7.2e-15 85.5 50 74.0
A04p26400 Brassica napus HOM05D005716 ORTHO05D099386 1.2e-14 84.7 46 78.3


User provided reference genes

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