Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy4G00050 Aquilegia oxysepala HOM05D004415 ORTHO05D005198 1.9e-164 582.4 294 100.0
GSVIVG01037942001 Vitis vinifera HOM05D004415 ORTHO05D005198 1.6e-129 466.5 295 79.7
TAR627G0414 Trochodendron aralioides HOM05D004415 ORTHO05D005198 5.9e-129 464.5 294 77.9
TAR627G1150 Trochodendron aralioides HOM05D004415 ORTHO05D005198 5.9e-129 464.5 294 77.9
Nn7g37839 Nelumbo nucifera HOM05D004415 ORTHO05D005198 1.7e-128 463.0 293 78.5
PGR083G0443 Punica granatum HOM05D004415 ORTHO05D005198 2.5e-127 459.1 294 77.2
Ciclev10016110m.g Citrus clementina HOM05D004415 ORTHO05D005198 3.2e-127 458.8 293 76.8
ATR1098G142 Amborella trichopoda HOM05D004415 ORTHO05D005198 1.6e-126 456.4 292 74.7
CiPaw.09G149000 Carya illinoinensis HOM05D004415 ORTHO05D005198 1.6e-126 456.4 292 77.4
Dinv03287 Davidia involucrata HOM05D004415 ORTHO05D005198 2.7e-126 455.7 297 75.8
Atru.chr10.660 Acer truncatum HOM05D004415 ORTHO05D005198 3.6e-126 455.3 292 77.1
Hma1.2p1_0008F-2.1_g005810 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 4.7e-126 454.9 294 76.2
Thecc.06G005600 Theobroma cacao HOM05D004415 ORTHO05D005198 1.0e-125 453.8 292 77.4
CDE03G0179 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 1.8e-125 453.0 293 76.5
Potri.001G440600 Populus trichocarpa HOM05D004415 ORTHO05D005198 6.7e-125 451.1 295 76.3
Actinidia29247 Actinidia chinensis HOM05D004415 ORTHO05D005198 1.1e-124 450.3 292 76.0
CDE06G2804 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 1.5e-124 449.9 293 75.4
CANSAT35G0835 Cannabis sativa HOM05D004415 ORTHO05D005198 2.6e-124 449.1 294 75.9
arahy.Tifrunner.gnm1.ann1.ZSFV9B Arachis hypogaea HOM05D004415 ORTHO05D005198 5.7e-124 448.0 293 75.4
vmacro03476 Vaccinium macrocarpon HOM05D004415 ORTHO05D005198 7.5e-124 447.6 292 75.3
Phvul.009G218500 Phaseolus vulgaris HOM05D004415 ORTHO05D005198 2.8e-123 445.7 294 74.8
Duzib235G0717 Durio zibethinus HOM05D004415 ORTHO05D005198 3.7e-123 445.3 293 76.1
Cfa000755 Carpinus fangiana HOM05D004415 ORTHO05D005198 4.8e-123 444.9 293 76.5
COL.COLO4_22898 Corchorus olitorius HOM05D004415 ORTHO05D005198 4.8e-123 444.9 292 75.7
ClCG01G008890 Citrullus lanatus HOM05D004415 ORTHO05D005198 8.2e-123 444.1 293 76.5
Sabra16G0298000 Salix brachista HOM05D004415 ORTHO05D005198 1.4e-122 443.4 303 74.3
Potri.011G155200 Populus trichocarpa HOM05D004415 ORTHO05D005198 2.4e-122 442.6 295 75.3
CsaV3_1G037760 Cucumis sativus L. HOM05D004415 ORTHO05D005198 3.1e-122 442.2 293 76.5
TWI38G1449 Tripterygium wilfordii HOM05D004415 ORTHO05D005198 4.1e-122 441.8 293 75.8
VMungo1309G0873 Vigna mungo HOM05D004415 ORTHO05D005198 5.3e-122 441.4 292 73.6
Rhsim13G0126400 Rhododendron simsii HOM05D004415 ORTHO05D005198 7.0e-122 441.0 292 74.7
Sabra16G0300000 Salix brachista HOM05D004415 ORTHO05D005198 7.0e-122 441.0 303 73.9
Cpa.g.sc173.46 Carica papaya HOM05D004415 ORTHO05D005198 9.1e-122 440.7 292 76.4
arahy.Tifrunner.gnm1.ann1.UW0JAL Arachis hypogaea HOM05D004415 ORTHO05D005198 1.6e-121 439.9 293 74.7
Gohir.A06G202400 Gossypium hirsutum HOM05D004415 ORTHO05D005198 1.6e-121 439.9 293 74.1
Gorai.010G247000 Gossypium raimondii HOM05D004415 ORTHO05D005198 1.6e-121 439.9 293 74.4
Lalb_Chr11g0073471 Lupinus albus HOM05D004415 ORTHO05D005198 2.7e-121 439.1 293 75.8
Lj1A1155G52 Lonicera japonica HOM05D004415 ORTHO05D005198 3.5e-121 438.7 292 73.6
SalBow8G0313 Salvia bowleyana HOM05D004415 ORTHO05D005198 3.5e-121 438.7 292 74.3
SalBow8G4844 Salvia bowleyana HOM05D004415 ORTHO05D005198 3.5e-121 438.7 292 74.3
Ca_02386_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 4.5e-121 438.3 293 74.4
MSTRG.16315 Avicennia marina HOM05D004415 ORTHO05D005198 1.7e-120 436.4 293 74.4
FvH4_3g11520 Fragaria vesca HOM05D004415 ORTHO05D005198 3.8e-120 435.3 293 72.7
Medtr2g047110 Medicago truncatula HOM05D004415 ORTHO05D005198 3.8e-120 435.3 293 73.7
QL05p063115 Quercus lobata HOM05D004415 ORTHO05D005198 5.0e-120 434.9 337 66.8
CSS0002194 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 6.5e-120 434.5 293 73.4
CSS0048897 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 8.5e-120 434.1 293 73.0
Glyma.15G191200 Glycine max HOM05D004415 ORTHO05D005198 1.5e-119 433.3 293 72.4
Oeu063146.1 Olea europaea HOM05D004415 ORTHO05D005198 1.9e-119 433.0 292 73.3
Peaxi162Scf00195g00616 Petunia axillaris HOM05D004415 ORTHO05D005198 1.9e-119 433.0 293 73.4
Sc17g0004090 Simmondsia chinensis HOM05D004415 ORTHO05D005198 1.9e-119 433.0 293 73.4
THA.LOC104812930 Tarenaya hassleriana HOM05D004415 ORTHO05D005198 1.9e-119 433.0 292 72.6
Migut.M01938 Erythranthe guttata HOM05D004415 ORTHO05D005198 2.5e-119 432.6 293 72.7
Sed0021762 Sechium edule HOM05D004415 ORTHO05D005198 3.2e-119 432.2 294 74.1
Manes.16G062800 Manihot esculenta HOM05D004415 ORTHO05D005198 4.2e-119 431.8 292 73.6
RcHm_v2.0_Chr5g0018471 Rosa chinensis HOM05D004415 ORTHO05D005198 5.5e-119 431.4 293 72.0
unitig_37.g12064 Utricularia gibba HOM05D004415 ORTHO05D005198 7.2e-119 431.0 293 74.1
Sopen02g018770 Solanum pennellii HOM05D004415 ORTHO05D005198 9.4e-119 430.6 293 72.4
Solyc02g069640.3 Solanum lycopersicum HOM05D004415 ORTHO05D005198 1.2e-118 430.3 293 72.0
PGSC0003DMG400021134 Solanum tuberosum HOM05D004415 ORTHO05D005198 1.2e-118 430.3 293 72.0
Ah.01g002800 Amaranthus hybridus HOM05D004415 ORTHO05D005198 3.6e-118 428.7 291 73.2
Hund01093 Selenicereus undatus HOM05D004415 ORTHO05D005198 3.6e-118 428.7 293 73.7
Glyma.09G083100 Glycine max HOM05D004415 ORTHO05D005198 4.7e-118 428.3 292 72.3
Lalb_Chr08g0233111 Lupinus albus HOM05D004415 ORTHO05D005198 4.7e-118 428.3 293 72.0
Prupe.4G102500 Prunus persica HOM05D004415 ORTHO05D005198 1.0e-117 427.2 292 72.9
MD00G1097300 Malus domestica HOM05D004415 ORTHO05D005198 1.4e-117 426.8 293 70.6
MSTRG.7566 Avicennia marina HOM05D004415 ORTHO05D005198 4.0e-117 425.2 292 73.3
FAN21G2450 Fragaria x ananassa HOM05D004415 ORTHO05D005198 1.5e-116 423.3 311 68.2
PSO675G6508 Papaver somniferum HOM05D004415 ORTHO05D005198 1.5e-116 423.3 294 71.1
HPP92_013188 Vanilla planifolia HOM05D004415 ORTHO05D005198 2.0e-116 422.9 292 70.9
PSO541G2694 Papaver somniferum HOM05D004415 ORTHO05D005198 2.6e-116 422.5 294 71.4
CSS0010489 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 3.4e-116 422.2 282 73.4
FAN16G2189 Fragaria x ananassa HOM05D004415 ORTHO05D005198 4.4e-116 421.8 311 68.2
Os04g0618500 Oryza sativa ssp. japonica HOM05D004415 ORTHO05D005198 5.7e-116 421.4 293 70.0
FAN25G0769 Fragaria x ananassa HOM05D004415 ORTHO05D005198 1.3e-115 420.2 310 66.8
Ca_17811_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 3.7e-115 418.7 295 71.5
Sp7g18770 Schrenkiella parvula HOM05D004415 ORTHO05D005198 3.7e-115 418.7 292 71.2
Nitab4.5_0007613g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 4.8e-115 418.3 293 71.7
Nitab4.5_0010415g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 4.8e-115 418.3 293 71.3
arahy.Tifrunner.gnm1.ann1.Z0R64B Arachis hypogaea HOM05D004415 ORTHO05D005198 8.3e-115 417.5 293 71.0
Psat1g018760 Pisum sativum HOM05D004415 ORTHO05D005198 8.3e-115 417.5 293 70.0
AUR62025006 Chenopodium quinoa HOM05D004415 ORTHO05D005198 1.8e-114 416.4 293 72.0
Thhalv10025893m.g Eutrema salsugineum HOM05D004415 ORTHO05D005198 1.8e-114 416.4 292 71.6
SGA_v2.0_scaffold298G47634 Striga asiatica HOM05D004415 ORTHO05D005198 2.4e-114 416.0 293 71.0
arahy.Tifrunner.gnm1.ann1.5MZ6ZS Arachis hypogaea HOM05D004415 ORTHO05D005198 3.1e-114 415.6 293 71.0
Carub.0007s2075 Capsella rubella HOM05D004415 ORTHO05D005198 3.1e-114 415.6 292 70.5
AT4G20410 Arabidopsis thaliana HOM05D004415 ORTHO05D005198 5.4e-114 414.8 292 70.2
AL7G33480 Arabidopsis lyrata HOM05D004415 ORTHO05D005198 7.0e-114 414.5 292 70.5
Eucgr.D01029 Eucalyptus grandis HOM05D004415 ORTHO05D005198 7.0e-114 414.5 258 77.9
TPR.G22904 Trifolium pratense HOM05D004415 ORTHO05D005198 2.0e-113 412.9 288 70.8
Lalb_Chr07g0185681 Lupinus albus HOM05D004415 ORTHO05D005198 4.5e-113 411.8 282 72.7
CARHR227240 Cardamine hirsuta HOM05D004415 ORTHO05D005198 5.9e-113 411.4 292 70.2
ECA236G1935 Erigeron canadensis HOM05D004415 ORTHO05D005198 5.9e-113 411.4 293 69.3
A01p12100 Brassica napus HOM05D004415 ORTHO05D005198 1.0e-112 410.6 292 70.5
Sabra11G0144600 Salix brachista HOM05D004415 ORTHO05D005198 1.7e-112 409.8 270 74.4
C01p14410 Brassica napus HOM05D004415 ORTHO05D005198 2.9e-112 409.1 292 70.2
BolC1t01398H Brassica oleracea HOM05D004415 ORTHO05D005198 2.9e-112 409.1 292 70.2
AUR62006530 Chenopodium quinoa HOM05D004415 ORTHO05D005198 2.9e-112 409.1 293 70.3
Medtr8g089250 Medicago truncatula HOM05D004415 ORTHO05D005198 2.9e-112 409.1 293 70.6
TPR.G6264 Trifolium pratense HOM05D004415 ORTHO05D005198 2.9e-112 409.1 295 70.2
CAN.G954.7 Capsicum annuum HOM05D004415 ORTHO05D005198 6.5e-112 407.9 282 72.7
BraA01t01153Z Brassica rapa HOM05D004415 ORTHO05D005198 1.5e-111 406.8 292 70.2
EL10Ac9g22486 Beta vulgaris HOM05D004415 ORTHO05D005198 2.1e-110 402.9 290 70.0
Sed0009944 Sechium edule HOM05D004415 ORTHO05D005198 2.7e-110 402.5 277 74.0
Gorai.009G116300 Gossypium raimondii HOM05D004415 ORTHO05D005198 2.3e-109 399.4 291 68.7
Aa31LG6G2800 Aethionema arabicum HOM05D004415 ORTHO05D005198 4.1e-106 388.7 292 67.1
Gohir.D06G219300 Gossypium hirsutum HOM05D004415 ORTHO05D005198 4.1e-106 388.7 246 76.4
Lsat_1_v5_gn_7_31101 Lactuca sativa HOM05D004415 ORTHO05D005198 3.0e-101 372.5 292 64.7
Gohir.D05G112100 Gossypium hirsutum HOM05D004415 ORTHO05D005198 7.0e-98 361.3 316 60.1
Haze_05963 Corylus avellana HOM05D004415 ORTHO05D005198 4.3e-95 352.1 293 64.5
AagrBONN_evm.TU.Sc2ySwM_368.1346 Anthoceros agrestis HOM05D004415 ORTHO05D005198 5.6e-95 351.7 294 56.5
Hma1.2p1_0008F-2.1_g005800 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 8.9e-93 344.4 215 75.8
Mapoly0008s0129 Marchantia polymorpha HOM05D004415 ORTHO05D005198 8.9e-93 344.4 293 58.7
Cc09_g04060 Coffea canephora HOM05D004415 ORTHO05D005198 1.3e-91 340.5 222 74.3
Pp3c19_23300 Physcomitrium patens HOM05D004415 ORTHO05D005198 4.1e-90 335.5 289 58.5
MELO3C021810.2 Cucumis melo HOM05D004415 ORTHO05D005198 9.2e-90 334.3 223 75.8
AagrBONN_evm.TU.Sc2ySwM_362.579 Anthoceros agrestis HOM05D004415 ORTHO05D005198 1.2e-89 334.0 293 56.7
AagrBONN_evm.TU.Sc2ySwM_368.3355 Anthoceros agrestis HOM05D004415 ORTHO05D005198 7.8e-89 331.3 293 56.3
Lj6g0004921 Lotus japonicus HOM05D004415 ORTHO05D005198 3.9e-88 328.9 292 57.5
Zm00001eb431060 Zea mays HOM05D004415 ORTHO05D005198 6.6e-88 328.2 214 72.4
arahy.Tifrunner.gnm1.ann1.QWIY8B Arachis hypogaea HOM05D004415 ORTHO05D005198 2.5e-87 326.2 279 62.4
HanXRQChr04g0119541 Helianthus annuus HOM05D004415 ORTHO05D005198 2.5e-87 326.2 222 71.2
CDE03G0221 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 4.0e-85 318.9 271 63.1
SMO228G0081 Selaginella moellendorffii HOM05D004415 ORTHO05D005198 2.6e-84 316.2 261 58.6
CBR_g24190 Chara braunii HOM05D004415 ORTHO05D005198 7.8e-81 304.7 295 54.6
Zm00001eb410240 Zea mays HOM05D004415 ORTHO05D005198 3.9e-80 302.4 223 65.0
Duzib043G0003 Durio zibethinus HOM05D004415 ORTHO05D005198 6.6e-72 275.0 176 77.3
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 1.6e-70 270.4 231 61.9
CBR_g48904 Chara braunii HOM05D004415 ORTHO05D005198 3.1e-69 266.2 255 54.1
arahy.Tifrunner.gnm1.ann1.6K3MVX Arachis hypogaea HOM05D004415 ORTHO05D005198 2.2e-67 260.0 177 72.9
Gohir.A05G111501 Gossypium hirsutum HOM05D004415 ORTHO05D005198 3.4e-60 236.1 214 60.3
MBI02_g43828_MAGBIO Magnolia biondii HOM05D004415 ORTHO05D005198 7.6e-60 235.0 150 76.0
arahy.Tifrunner.gnm1.ann1.W2C20P Arachis hypogaea HOM05D004415 ORTHO05D005198 1.8e-56 223.8 149 73.2
TAR627G0753 Trochodendron aralioides HOM05D004415 ORTHO05D005198 1.9e-55 220.3 135 80.0
SEGI_29507 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 1.3e-54 217.6 162 63.0
Zm00001eb072080 Zea mays HOM05D004415 ORTHO05D005198 1.4e-53 214.2 143 66.4
MCO11G422 Micromonas commoda HOM05D004415 ORTHO05D005198 1.3e-46 191.0 266 38.3
Oeu063144.1 Olea europaea HOM05D004415 ORTHO05D005198 2.7e-41 173.3 181 53.0
VMungo0464G1344 Vigna mungo HOM05D004415 ORTHO05D005198 3.9e-40 169.5 105 77.1
arahy.Tifrunner.gnm1.ann1.NJ63RV Arachis hypogaea HOM05D004415 ORTHO05D005198 3.7e-38 162.9 138 60.1
PRCOL_00005341 Prasinoderma coloniale HOM05D004415 ORTHO05D005198 1.2e-36 157.9 302 34.8
SEGI_22365 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 3.4e-36 156.4 106 73.6
Zm00001eb266710 Zea mays HOM05D004415 ORTHO05D005198 3.9e-32 142.9 126 56.3
arahy.Tifrunner.gnm1.ann1.YAAB6X Arachis hypogaea HOM05D004415 ORTHO05D005198 5.3e-29 132.5 132 55.3
Cre08.g385700 Chlamydomonas reinhardtii HOM05D004415 ORTHO05D005198 1.1e-21 108.2 267 27.3
FvH4_3g11480 Fragaria vesca HOM05D004415 ORTHO05D005198 1.5e-20 104.4 81 65.4
arahy.Tifrunner.gnm1.ann1.479FYN Arachis hypogaea HOM05D004415 ORTHO05D005198 1.0e-19 101.7 118 51.7
SGA_v2.0_scaffold298G47629 Striga asiatica HOM05D004415 ORTHO05D005198 1.6e-17 94.4 126 45.2
Cc09_g04070 Coffea canephora HOM05D004415 ORTHO05D005198 1.8e-16 90.9 63 73.0
arahy.Tifrunner.gnm1.ann1.LII2ER Arachis hypogaea HOM05D004415 ORTHO05D005198 3.8e-11 73.2 106 43.4
arahy.Tifrunner.gnm1.ann1.8SCZ96 Arachis hypogaea HOM05D004415 ORTHO05D005198 9.4e-10 68.6 106 41.5
VMungo0331G0484 Vigna mungo HOM05D003730 ORTHO05D005198 3.6e-09 66.6 83 48.2
BcaB03g15995 Brassica carinata HOM05D004415 ORTHO05D005198 4.7e-09 66.2 58 62.1
GSVIVG01003362001 Vitis vinifera HOM05D004415 ORTHO05D005198 5.2e-08 62.8 52 59.6
GSVIVG01005645001 Vitis vinifera HOM05D004415 ORTHO05D005198 5.7e-07 59.3 52 55.8
GSVIVG01032305001 Vitis vinifera HOM05D004415 ORTHO05D005198 5.7e-07 59.3 52 55.8
SGA_v2.0_scaffold298G47630 Striga asiatica HOM05D004415 ORTHO05D005198 3.7e-06 56.6 59 49.2
VMungo0251G3417 Vigna mungo HOM05D004415 ORTHO05D005198 4.8e-06 56.2 53 52.8
HanXRQChr04g0119531 Helianthus annuus HOM05D004415 ORTHO05D005198 8.2e-06 55.5 35 71.4


User provided reference genes

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