Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy478s001 Aquilegia oxysepala HOM05D001111 ORTHO05D000939 8.8e-67 256.9 139 100.0
Aqoxy3G02945 Aquilegia oxysepala HOM05D001111 ORTHO05D000939 1.6e-31 139.8 108 75.0
TAR622G0132 Trochodendron aralioides HOM05D001111 ORTHO05D000939 2.2e-17 92.8 106 47.2
Nn4g22768 Nelumbo nucifera HOM05D001111 ORTHO05D000939 1.6e-15 86.7 107 47.7
TAR371G1086 Trochodendron aralioides HOM05D001111 ORTHO05D000939 7.8e-15 84.3 109 46.8
TAR629G2362 Trochodendron aralioides HOM05D001111 ORTHO05D000939 1.7e-14 83.2 118 43.2
Dinv00507 Davidia involucrata HOM05D001111 ORTHO05D000939 1.2e-10 70.5 61 65.6
Dinv35071 Davidia involucrata HOM05D005823 ORTHO05D007536 1.2e-10 70.5 61 65.6
MBI16_g32208_MAGBIO Magnolia biondii HOM05D001111 ORTHO05D000939 2.0e-10 69.7 122 39.3
Dinv02893 Davidia involucrata HOM05D001111 ORTHO05D000939 7.6e-10 67.8 124 40.3
Oeu040830.1 Olea europaea HOM05D001111 ORTHO05D000939 1.3e-09 67.0 115 41.7
Oeu040831.1 Olea europaea HOM05D001111 ORTHO05D000939 1.3e-09 67.0 115 41.7
QL03p060170 Quercus lobata HOM05D001111 ORTHO05D000939 1.3e-09 67.0 113 40.7
Prupe.1G253100 Prunus persica HOM05D001111 ORTHO05D000939 1.7e-09 66.6 124 41.1
Nitab4.5_0006281g0050 Nicotiana tabacum HOM05D001111 ORTHO05D000939 2.9e-09 65.9 73 50.7
GSVIVG01032463001 Vitis vinifera HOM05D001111 ORTHO05D000939 2.9e-09 65.9 60 58.3
CANSAT01G0717 Cannabis sativa HOM05D001111 ORTHO05D000939 3.8e-09 65.5 108 45.4
Lj7P592T34 Lonicera japonica HOM05D001111 ORTHO05D000939 4.9e-09 65.1 59 55.9
FAN22G0614 Fragaria x ananassa HOM05D001111 ORTHO05D000939 6.4e-09 64.7 113 44.2
Hma1.2p1_0176F.1_g077400 Hydrangea macrophylla HOM05D001111 ORTHO05D000939 6.4e-09 64.7 110 38.2
Manes.12G028200 Manihot esculenta HOM05D001111 ORTHO05D000939 6.4e-09 64.7 123 38.2
Cpa.g.sc76.61 Carica papaya HOM05D001111 ORTHO05D000939 8.4e-09 64.3 130 36.9
FvH4_4g34370 Fragaria vesca HOM05D001111 ORTHO05D000939 8.4e-09 64.3 113 44.2
FAN12G3240 Fragaria x ananassa HOM05D001111 ORTHO05D000939 8.4e-09 64.3 113 44.2
FAN17G1475 Fragaria x ananassa HOM05D001111 ORTHO05D000939 1.1e-08 63.9 124 39.5
CSS0041124 Camellia sinensis var. sinensis HOM05D001111 ORTHO05D000939 1.4e-08 63.5 77 48.1
CAN.G464.41 Capsicum annuum HOM05D001111 ORTHO05D000939 1.9e-08 63.2 121 33.9
FAN07G0616 Fragaria x ananassa HOM05D001111 ORTHO05D000939 1.9e-08 63.2 113 43.4
Solyc02g086810.1 Solanum lycopersicum HOM05D001111 ORTHO05D000939 1.9e-08 63.2 61 57.4
Sopen02g031580 Solanum pennellii HOM05D001111 ORTHO05D000939 1.9e-08 63.2 61 57.4
PGSC0003DMG400000492 Solanum tuberosum HOM05D001111 ORTHO05D000939 1.9e-08 63.2 61 57.4
Nitab4.5_0007719g0040 Nicotiana tabacum HOM05D001111 ORTHO05D000939 5.4e-08 61.6 123 36.6
CSS0035264 Camellia sinensis var. sinensis HOM05D001111 ORTHO05D000939 7.1e-08 61.2 63 55.6
CSS0041696 Camellia sinensis var. sinensis HOM05D001111 ORTHO05D000939 7.1e-08 61.2 63 55.6
MSTRG.11451 Avicennia marina HOM05D001111 ORTHO05D000939 9.3e-08 60.8 132 43.2
CAN.G781.10 Capsicum annuum HOM05D001111 ORTHO05D000939 9.3e-08 60.8 126 37.3
CDE06G1645 Ceratophyllum demersum HOM05D000875 ORTHO05D000939 9.3e-08 60.8 77 48.1
Dinv33484 Davidia involucrata HOM05D001111 ORTHO05D000939 9.3e-08 60.8 65 58.5
Duzib205G1255 Durio zibethinus HOM05D001111 ORTHO05D000939 9.3e-08 60.8 136 38.2
HanXRQChr05g0156231 Helianthus annuus HOM05D001111 ORTHO05D000939 9.3e-08 60.8 106 38.7
vmacro18255 Vaccinium macrocarpon HOM05D001111 ORTHO05D000939 1.2e-07 60.5 76 47.4
Atru.chr6.2310 Acer truncatum HOM05D001111 ORTHO05D000939 1.6e-07 60.1 140 34.3
Manes.06G104800 Manihot esculenta HOM05D001111 ORTHO05D000939 1.6e-07 60.1 125 36.0
COL.COLO4_30037 Corchorus olitorius HOM05D001111 ORTHO05D000939 2.1e-07 59.7 78 51.3
MBI10_g14555_MAGBIO Magnolia biondii HOM05D001111 ORTHO05D000939 2.1e-07 59.7 89 40.4
Oeu048646.1 Olea europaea HOM05D001111 ORTHO05D000939 2.1e-07 59.7 75 53.3
MSTRG.3168 Avicennia marina HOM05D001111 ORTHO05D000939 3.5e-07 58.9 67 49.3
Peaxi162Scf00700g00061 Petunia axillaris HOM05D001111 ORTHO05D000939 3.5e-07 58.9 63 50.8
Peaxi162Scf00700g00062 Petunia axillaris HOM05D001111 ORTHO05D000939 3.5e-07 58.9 63 50.8
RcHm_v2.0_Chr4g0443781 Rosa chinensis HOM05D001111 ORTHO05D000939 3.5e-07 58.9 116 40.5
CAN.G464.40 Capsicum annuum HOM05D001111 ORTHO05D000939 4.6e-07 58.5 60 50.0
CAN.G4822.1 Capsicum annuum HOM05D001111 ORTHO05D000939 4.6e-07 58.5 60 50.0
DCAR_026134 Daucus carota HOM05D001111 ORTHO05D000939 4.6e-07 58.5 69 50.7
Oeu037698.1 Olea europaea HOM05D001111 ORTHO05D000939 4.6e-07 58.5 75 53.3
Peaxi162Scf00700g00055 Petunia axillaris HOM05D001111 ORTHO05D000939 4.6e-07 58.5 63 50.8
MD16G1093500 Malus domestica HOM05D001111 ORTHO05D000939 6.0e-07 58.2 111 39.6
Nitab4.5_0009783g0040 Nicotiana tabacum HOM05D001111 ORTHO05D000939 6.0e-07 58.2 62 54.8
PGR142G1453 Punica granatum HOM05D001111 ORTHO05D000939 6.0e-07 58.2 61 52.5
Thecc.03G012600 Theobroma cacao HOM05D001111 ORTHO05D000939 6.0e-07 58.2 120 37.5
CiPaw.11G026300 Carya illinoinensis HOM05D001111 ORTHO05D000939 7.9e-07 57.8 117 33.3
Manes.17G116400 Manihot esculenta HOM05D001111 ORTHO05D000939 7.9e-07 57.8 92 43.5
Actinidia33068 Actinidia chinensis HOM05D001111 ORTHO05D000939 1.0e-06 57.4 65 50.8
PGSC0003DMG400024504 Solanum tuberosum HOM05D001111 ORTHO05D000939 1.0e-06 57.4 62 53.2
Oeu022162.1 Olea europaea HOM05D001111 ORTHO05D000939 1.3e-06 57.0 60 58.3
Sopen03g033450 Solanum pennellii HOM05D001111 ORTHO05D000939 1.3e-06 57.0 120 38.3
CAN.G206.25 Capsicum annuum HOM05D001111 ORTHO05D000939 1.7e-06 56.6 61 52.5
Manes.14G065800 Manihot esculenta HOM05D001111 ORTHO05D000939 1.7e-06 56.6 60 51.7
Rhsim10G0021000 Rhododendron simsii HOM05D001111 ORTHO05D000939 1.7e-06 56.6 71 47.9
Solyc03g114350.1 Solanum lycopersicum HOM05D001111 ORTHO05D000939 1.7e-06 56.6 119 37.0
Oeu037699.1 Olea europaea HOM05D001111 ORTHO05D000939 2.3e-06 56.2 75 50.7
DCAR_021689 Daucus carota HOM05D001111 ORTHO05D000939 3.0e-06 55.8 67 49.3
HanXRQChr09g0272191 Helianthus annuus HOM05D001111 ORTHO05D000939 3.0e-06 55.8 58 51.7
Nitab4.5_0001017g0090 Nicotiana tabacum HOM05D001111 ORTHO05D000939 3.0e-06 55.8 62 54.8
Thecc.04G010500 Theobroma cacao HOM05D001111 ORTHO05D000939 3.0e-06 55.8 126 34.1
CDE04G3478 Ceratophyllum demersum HOM05D000875 ORTHO05D000684 3.9e-06 55.5 127 33.9
Lju41C35T12 Lonicera japonica HOM05D001111 ORTHO05D000939 3.9e-06 55.5 61 52.5
Oeu062980.1 Olea europaea HOM05D001111 ORTHO05D000939 3.9e-06 55.5 73 49.3
Peaxi162Scf00700g00066 Petunia axillaris HOM05D001111 ORTHO05D000939 3.9e-06 55.5 63 49.2
Sc04g0001810 Simmondsia chinensis HOM05D001111 ORTHO05D000939 3.9e-06 55.5 64 53.1
Sc07g0003050 Simmondsia chinensis HOM05D001111 ORTHO05D000939 3.9e-06 55.5 68 47.1
CiPaw.05G151600 Carya illinoinensis HOM05D001111 ORTHO05D000939 5.1e-06 55.1 78 47.4
Duzib187G0831 Durio zibethinus HOM05D001111 ORTHO05D000939 6.6e-06 54.7 60 51.7
Glyma.16G073400 Glycine max HOM05D001111 ORTHO05D000939 6.6e-06 54.7 79 44.3
Lalb_Chr10g0093891 Lupinus albus HOM05D001111 ORTHO05D000939 6.6e-06 54.7 113 34.5
PGSC0003DMG400030091 Solanum tuberosum HOM05D001111 ORTHO05D000939 6.6e-06 54.7 58 51.7
PGSC0003DMG400030093 Solanum tuberosum HOM05D001111 ORTHO05D000939 6.6e-06 54.7 83 43.4
Atru.chr9.2477 Acer truncatum HOM05D001111 ORTHO05D000939 8.7e-06 54.3 77 46.8
Glyma.19G065000 Glycine max HOM05D001111 ORTHO05D000939 8.7e-06 54.3 79 44.3


User provided reference genes

Program Settings