Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy450s002 Aquilegia oxysepala HOM05D003819 ORTHO05D019686 1.6e-67 259.2 127 100.0
Aqoxy7G03214 Aquilegia oxysepala HOM05D003819 ORTHO05D019686 1.6e-67 259.2 127 100.0
Aqoxy1G02044 Aquilegia oxysepala HOM05D003819 ORTHO05D005291 9.9e-57 223.4 119 90.8
Lj1P684T13 Lonicera japonica HOM05D003819 ORTHO05D005291 5.8e-33 144.4 103 64.1
QL05p047385 Quercus lobata HOM05D003819 ORTHO05D005291 1.3e-32 143.3 103 61.2
MBI06_g08600_MAGBIO Magnolia biondii HOM05D003819 ORTHO05D005291 8.4e-32 140.6 101 64.4
Rhsim06G0130800 Rhododendron simsii HOM05D003819 ORTHO05D005291 1.1e-31 140.2 103 61.2
Manes.17G056400 Manihot esculenta HOM05D003819 ORTHO05D005291 3.2e-31 138.7 96 63.5
Prupe.3G117700 Prunus persica HOM05D003819 ORTHO05D005291 3.2e-31 138.7 100 62.0
TAR629G3160 Trochodendron aralioides HOM05D003819 ORTHO05D005291 3.2e-31 138.7 103 60.2
MD17G1266700 Malus domestica HOM05D003819 ORTHO05D005291 4.2e-31 138.3 100 63.0
GSVIVG01020711001 Vitis vinifera HOM05D003819 ORTHO05D005291 4.2e-31 138.3 100 64.0
Nn1g09185 Nelumbo nucifera HOM05D003819 ORTHO05D005291 9.3e-31 137.1 99 58.6
RcHm_v2.0_Chr2g0129761 Rosa chinensis HOM05D003819 ORTHO05D005291 9.3e-31 137.1 100 62.0
MD09G1236800 Malus domestica HOM05D003819 ORTHO05D005291 1.2e-30 136.7 100 62.0
Actinidia11157 Actinidia chinensis HOM05D003819 ORTHO05D005291 2.7e-30 135.6 103 56.3
Dinv07714 Davidia involucrata HOM05D003819 ORTHO05D005291 2.7e-30 135.6 102 58.8
Lalb_Chr22g0356941 Lupinus albus HOM05D003819 ORTHO05D005291 3.5e-30 135.2 114 54.4
Manes.17G056300 Manihot esculenta HOM05D003819 ORTHO05D005291 4.6e-30 134.8 96 61.5
Sabra11G0048300 Salix brachista HOM05D003819 ORTHO05D005291 7.9e-30 134.0 96 61.5
Gorai.010G159500 Gossypium raimondii HOM05D003819 ORTHO05D005291 1.0e-29 133.7 113 54.9
Thecc.01G151000 Theobroma cacao HOM05D003819 ORTHO05D005291 1.0e-29 133.7 114 52.6
COL.COLO4_31287 Corchorus olitorius HOM05D003819 ORTHO05D005291 1.3e-29 133.3 99 62.6
FAN02G3241 Fragaria x ananassa HOM05D003819 ORTHO05D005291 1.3e-29 133.3 100 59.0
FAN09G4766 Fragaria x ananassa HOM05D003819 ORTHO05D005291 1.3e-29 133.3 100 59.0
Potri.011G066700 Populus trichocarpa HOM05D003819 ORTHO05D005291 1.3e-29 133.3 96 60.4
FAN05G0664 Fragaria x ananassa HOM05D003819 ORTHO05D005291 1.8e-29 132.9 100 58.0
Actinidia10955 Actinidia chinensis HOM05D003819 ORTHO05D005291 2.3e-29 132.5 103 57.3
MSTRG.15087 Avicennia marina HOM05D003819 ORTHO05D005291 2.3e-29 132.5 100 58.0
CANSAT64G0548 Cannabis sativa HOM05D003819 ORTHO05D005291 2.3e-29 132.5 103 58.3
COL.COLO4_33586 Corchorus olitorius HOM05D003819 ORTHO05D005291 3.0e-29 132.1 104 54.8
Lalb_Chr03g0029931 Lupinus albus HOM05D003819 ORTHO05D005291 3.0e-29 132.1 110 53.6
PSO229G0146 Papaver somniferum HOM05D003819 ORTHO05D005291 3.0e-29 132.1 100 61.0
PSO675G1769 Papaver somniferum HOM05D003819 ORTHO05D005291 3.0e-29 132.1 100 61.0
Cfa000614 Carpinus fangiana HOM05D003819 ORTHO05D005291 8.7e-29 130.6 107 57.0
Duzib235G0786 Durio zibethinus HOM05D003819 ORTHO05D005291 8.7e-29 130.6 99 60.6
FvH4_6g27480 Fragaria vesca HOM05D003819 ORTHO05D005291 8.7e-29 130.6 100 59.0
QL08p041841 Quercus lobata HOM05D003819 ORTHO05D005291 1.1e-28 130.2 100 57.0
CiPaw.03G195200 Carya illinoinensis HOM05D003819 ORTHO05D005291 1.5e-28 129.8 104 57.7
Gohir.A12G077800 Gossypium hirsutum HOM05D003819 ORTHO05D005291 1.5e-28 129.8 100 56.0
Gohir.D12G091900 Gossypium hirsutum HOM05D003819 ORTHO05D005291 1.5e-28 129.8 100 56.0
Gorai.008G099500 Gossypium raimondii HOM05D003819 ORTHO05D005291 1.5e-28 129.8 100 56.0
Nitab4.5_0006875g0030 Nicotiana tabacum HOM05D003819 ORTHO05D005291 1.5e-28 129.8 103 56.3
Haze_06225 Corylus avellana HOM05D003819 ORTHO05D005291 1.9e-28 129.4 98 62.2
CiPaw.09G070200 Carya illinoinensis HOM05D003819 ORTHO05D005291 3.3e-28 128.6 99 57.6
Lj3g0006196 Lotus japonicus HOM05D003819 ORTHO05D005291 3.3e-28 128.6 103 54.4
Oeu058996.1 Olea europaea HOM05D003819 ORTHO05D005291 3.3e-28 128.6 105 56.2
PGSC0003DMG400035320 Solanum tuberosum HOM05D003819 ORTHO05D005291 3.3e-28 128.6 103 56.3
Cpa.g.sc52.168 Carica papaya HOM05D003819 ORTHO05D005291 4.3e-28 128.3 113 54.0
FAN14G1852 Fragaria x ananassa HOM05D003819 ORTHO05D005291 4.3e-28 128.3 100 58.0
Peaxi162Scf00469g00034 Petunia axillaris HOM05D003819 ORTHO05D005291 4.3e-28 128.3 103 56.3
AUR62040526 Chenopodium quinoa HOM05D003819 ORTHO05D005291 5.6e-28 127.9 111 55.0
HanXRQChr17g0558991 Helianthus annuus HOM05D003819 ORTHO05D005291 5.6e-28 127.9 103 55.3
Solyc07g055120.4 Solanum lycopersicum HOM05D003819 ORTHO05D005291 5.6e-28 127.9 103 56.3
Sopen07g027110 Solanum pennellii HOM05D003819 ORTHO05D005291 5.6e-28 127.9 103 56.3
AUR62042109 Chenopodium quinoa HOM05D003819 ORTHO05D005291 7.4e-28 127.5 96 57.3
CDE10G0290 Ceratophyllum demersum HOM05D003819 ORTHO05D005291 9.6e-28 127.1 99 57.6
Nitab4.5_0000249g0240 Nicotiana tabacum HOM05D003819 ORTHO05D005291 9.6e-28 127.1 103 55.3
CAN.G1148.8 Capsicum annuum HOM05D003819 ORTHO05D005291 1.3e-27 126.7 100 58.0
Ciclev10017759m.g Citrus clementina HOM05D003819 ORTHO05D005291 1.3e-27 126.7 99 59.6
Dinv40684 Davidia involucrata HOM05D003819 ORTHO05D005291 1.3e-27 126.7 95 56.8
Atru.chr6.2788 Acer truncatum HOM05D003819 ORTHO05D005291 1.6e-27 126.3 103 53.4
Sabra14G0107700 Salix brachista HOM05D003819 ORTHO05D005291 2.1e-27 125.9 100 57.0
Solyc12g010900.1 Solanum lycopersicum HOM05D003819 ORTHO05D005291 2.1e-27 125.9 103 56.3
Duzib264G1063 Durio zibethinus HOM05D003819 ORTHO05D005291 2.8e-27 125.6 103 54.4
Lj3g0009870 Lotus japonicus HOM05D003819 ORTHO05D005291 3.7e-27 125.2 103 55.3
TWI14G0201 Tripterygium wilfordii HOM05D003819 ORTHO05D005291 3.7e-27 125.2 100 57.0
DCAR_021294 Daucus carota HOM05D003819 ORTHO05D005291 4.8e-27 124.8 103 56.3
Eucgr.K01130 Eucalyptus grandis HOM05D003819 ORTHO05D005291 4.8e-27 124.8 103 57.3
Sopen12g006260 Solanum pennellii HOM05D003819 ORTHO05D005291 4.8e-27 124.8 103 55.3
Gohir.A06G131200 Gossypium hirsutum HOM05D003819 ORTHO05D005291 6.2e-27 124.4 105 55.2
PGR142G0379 Punica granatum HOM05D003819 ORTHO05D005291 6.2e-27 124.4 103 53.4
PGSC0003DMG400007856 Solanum tuberosum HOM05D003819 ORTHO05D005291 8.2e-27 124.0 103 55.3
Atru.chr11.57 Acer truncatum HOM05D003819 ORTHO05D005291 1.1e-26 123.6 103 53.4
BcaC02g12429 Brassica carinata HOM05D003819 ORTHO05D005291 1.1e-26 123.6 103 54.4
C04p03960 Brassica napus HOM05D003819 ORTHO05D005291 1.1e-26 123.6 103 54.4
BolC4t22032H Brassica oleracea HOM05D003819 ORTHO05D005291 1.1e-26 123.6 103 54.4
MELO3C018720.2 Cucumis melo HOM05D003819 ORTHO05D005291 1.1e-26 123.6 100 55.0
Glyma.12G128600 Glycine max HOM05D003819 ORTHO05D005291 1.1e-26 123.6 103 52.4
Nitab4.5_0013227g0010 Nicotiana tabacum HOM05D003819 ORTHO05D005291 1.1e-26 123.6 103 54.4
Sed0027609 Sechium edule HOM05D003819 ORTHO05D005291 1.1e-26 123.6 100 54.0
Glyma.06G277000 Glycine max HOM05D003819 ORTHO05D005291 1.4e-26 123.2 103 52.4
Gohir.A10G036700 Gossypium hirsutum HOM05D003819 ORTHO05D005291 1.4e-26 123.2 99 57.6
Cc00_g28410 Coffea canephora HOM05D003819 ORTHO05D005291 1.8e-26 122.9 101 54.5
CsaV3_7G005710 Cucumis sativus L. HOM05D003819 ORTHO05D005291 1.8e-26 122.9 100 52.0
Sp4g24760 Schrenkiella parvula HOM05D003819 ORTHO05D005291 1.8e-26 122.9 100 57.0
Cc05_g08390 Coffea canephora HOM05D003819 ORTHO05D005291 2.4e-26 122.5 100 53.0
Lj3g0028116 Lotus japonicus HOM05D003819 ORTHO05D005291 2.4e-26 122.5 103 53.4
Migut.M00265 Erythranthe guttata HOM05D003819 ORTHO05D005291 3.1e-26 122.1 100 54.0
Peaxi162Scf00384g00211 Petunia axillaris HOM05D003819 ORTHO05D005291 3.1e-26 122.1 103 55.3
Potri.014G142600 Populus trichocarpa HOM05D003819 ORTHO05D005291 3.1e-26 122.1 100 56.0
CAN.G1081.14 Capsicum annuum HOM05D003819 ORTHO05D005291 4.0e-26 121.7 103 53.4
ClCG07G002740 Citrullus lanatus HOM05D003819 ORTHO05D005291 5.3e-26 121.3 100 55.0
Thecc.06G169900 Theobroma cacao HOM05D003819 ORTHO05D005291 5.3e-26 121.3 96 57.3
Cfa023595 Carpinus fangiana HOM05D003819 ORTHO05D005291 6.9e-26 120.9 103 54.4
SalBow7G4473 Salvia bowleyana HOM05D003819 ORTHO05D005291 6.9e-26 120.9 102 52.0
Aa31LG1G24420 Aethionema arabicum HOM05D003819 ORTHO05D005291 9.0e-26 120.6 103 53.4
BcaNung03224 Brassica carinata HOM05D003819 ORTHO05D005291 9.0e-26 120.6 102 53.9
TPR.G4345 Trifolium pratense HOM05D003819 ORTHO05D005291 9.0e-26 120.6 100 56.0
BcaB06g29258 Brassica carinata HOM05D003819 ORTHO05D005291 1.2e-25 120.2 100 55.0
Ca_18872_v3 Cicer arietinum L. HOM05D003819 ORTHO05D005291 1.2e-25 120.2 100 54.0
VMungo1127G0295 Vigna mungo HOM05D003819 ORTHO05D005291 1.2e-25 120.2 103 53.4
BcaC02g07227 Brassica carinata HOM05D003819 ORTHO05D005291 1.5e-25 119.8 100 57.0
C04p69840 Brassica napus HOM05D003819 ORTHO05D005291 1.5e-25 119.8 100 57.0
BolC4t28484H Brassica oleracea HOM05D003819 ORTHO05D005291 1.5e-25 119.8 100 57.0
Haze_13379 Corylus avellana HOM05D003819 ORTHO05D005291 1.5e-25 119.8 103 54.4
Gorai.011G039300 Gossypium raimondii HOM05D003819 ORTHO05D005291 1.5e-25 119.8 99 56.6
A04p32330 Brassica napus HOM05D003819 ORTHO05D005291 2.6e-25 119.0 100 55.0
BraA04t18686Z Brassica rapa HOM05D003819 ORTHO05D005291 2.6e-25 119.0 100 55.0
EL10Ac9g20949 Beta vulgaris HOM05D003819 ORTHO05D005291 3.4e-25 118.6 96 54.2
Nn6g34429 Nelumbo nucifera HOM05D003819 ORTHO05D019686 3.4e-25 118.6 98 54.1
Psat7g136560 Pisum sativum HOM05D003819 ORTHO05D005291 3.4e-25 118.6 100 55.0
THA.LOC104802258 Tarenaya hassleriana HOM05D003819 ORTHO05D005291 3.4e-25 118.6 109 53.2
ECA233G0398 Erigeron canadensis HOM05D003819 ORTHO05D005291 4.5e-25 118.2 103 49.5
Ah.01g003580 Amaranthus hybridus HOM05D003819 ORTHO05D005291 5.8e-25 117.9 96 53.1
Gohir.D10G037300 Gossypium hirsutum HOM05D003819 ORTHO05D005291 7.6e-25 117.5 99 55.6
Lsat_1_v5_gn_8_141221 Lactuca sativa HOM05D003819 ORTHO05D005291 7.6e-25 117.5 99 53.5
Medtr4g080020 Medicago truncatula HOM05D003819 ORTHO05D005291 7.6e-25 117.5 100 52.0
Phvul.011G129700 Phaseolus vulgaris HOM05D003819 ORTHO05D005291 7.6e-25 117.5 103 52.4
AL4G41180 Arabidopsis lyrata HOM05D003819 ORTHO05D005291 1.0e-24 117.1 96 57.3
Thhalv10017925m.g Eutrema salsugineum HOM05D003819 ORTHO05D005291 1.0e-24 117.1 100 55.0
Carub.0004s2507 Capsella rubella HOM05D003819 ORTHO05D005291 1.7e-24 116.3 100 55.0
AT2G42620 Arabidopsis thaliana HOM05D003819 ORTHO05D005291 2.2e-24 115.9 100 55.0
SEGI_05136 Sequoiadendron giganteum HOM05D003819 ORTHO05D005291 2.2e-24 115.9 96 54.2
CARHR137760 Cardamine hirsuta HOM05D003819 ORTHO05D005291 3.8e-24 115.2 96 56.2
SGA_v2.0_scaffold9G04831 Striga asiatica HOM05D003819 ORTHO05D005291 3.8e-24 115.2 100 51.0
Sc21g0004140 Simmondsia chinensis HOM05D003819 ORTHO05D005291 4.9e-24 114.8 99 53.5
THA.LOC104813346 Tarenaya hassleriana HOM05D003819 ORTHO05D005291 9.3e-23 110.5 96 52.1
ATR0602G021 Amborella trichopoda HOM05D003819 ORTHO05D005291 1.2e-22 110.2 112 45.5
Ciclev10014472m.g Citrus clementina HOM05D003819 ORTHO05D005291 7.9e-22 107.5 103 46.6
CSS0043691 Camellia sinensis var. sinensis HOM05D003819 ORTHO05D005291 3.0e-21 105.5 103 48.5
RcHm_v2.0_Chr2g0128411 Rosa chinensis HOM05D003819 ORTHO05D005291 3.0e-21 105.5 74 60.8
Os06g0154200 Oryza sativa ssp. japonica HOM05D003819 ORTHO05D005291 4.3e-20 101.7 114 45.6
Mapoly0113s0006 Marchantia polymorpha HOM05D003819 ORTHO05D005291 7.4e-20 100.9 96 50.0
Zm00001eb376660 Zea mays HOM05D003819 ORTHO05D005291 3.7e-19 98.6 107 46.7
Zm00001eb270950 Zea mays HOM05D003819 ORTHO05D005291 8.2e-19 97.4 114 42.1
Gohir.D06G137250 Gossypium hirsutum HOM05D003819 ORTHO05D005291 1.8e-18 96.3 81 55.6
Atru.chr10.1659 Acer truncatum HOM05D003819 ORTHO05D005291 6.9e-18 94.4 103 48.5
vmacro12379 Vaccinium macrocarpon HOM05D003819 ORTHO05D005291 2.6e-17 92.4 103 49.5
A05p03390 Brassica napus HOM05D003819 ORTHO05D019686 7.6e-17 90.9 78 53.8
unitig_85.g27374 Utricularia gibba HOM05D003819 ORTHO05D005291 6.5e-16 87.8 77 45.5
Pp3c17_1180 Physcomitrium patens HOM05D003819 ORTHO05D005291 3.6e-14 82.0 96 39.6
AagrBONN_evm.TU.Sc2ySwM_228.1793 Anthoceros agrestis HOM05D003819 ORTHO05D005291 4.6e-14 81.6 96 41.7
SMO118G0454 Selaginella moellendorffii HOM05D003819 ORTHO05D005291 1.8e-13 79.7 91 37.4
Dinv16776 Davidia involucrata HOM05D003819 ORTHO05D005291 3.0e-13 79.0 99 44.4
Nn1g05663 Nelumbo nucifera HOM05D003819 ORTHO05D019686 2.5e-12 75.9 67 47.8
Nn3g18421 Nelumbo nucifera HOM05D003819 ORTHO05D019686 2.5e-12 75.9 53 58.5
Nn5g28220 Nelumbo nucifera HOM05D003819 ORTHO05D019686 6.3e-11 71.2 51 56.9
Haze_22749 Corylus avellana HOM05D003819 ORTHO05D005291 1.3e-08 63.5 52 57.7
Psat3g013160 Pisum sativum HOM05D003819 ORTHO05D005291 3.8e-08 62.0 48 52.1
Haze_02876 Corylus avellana HOM05D000448 ORTHO05D000291 1.4e-07 60.1 52 53.8


User provided reference genes

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