Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy437s001 Aquilegia oxysepala HOM05D000007 ORTHO05D000039 8.9e-92 340.1 157 100.0
Aqoxy5G04201 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 3.3e-17 92.4 102 46.1
Aqoxy5G04202 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 4.7e-16 88.6 103 46.6
Aqoxy5G04199 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 9.8e-14 80.9 113 45.1
TAR626G0901 Trochodendron aralioides HOM05D000007 ORTHO05D000017 1.2e-11 73.9 96 37.5
Aqoxy3G00250 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 8.6e-10 67.8 96 38.5
Aqoxy5G03304 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 8.6e-10 67.8 87 37.9
Dinv43784 Davidia involucrata HOM05D001290 ORTHO05D001180 1.1e-09 67.4 96 38.5
Duzib133G1250 Durio zibethinus HOM05D000007 ORTHO05D000521 1.9e-09 66.6 94 40.4
EL10As6g23636 Beta vulgaris HOM05D000007 ORTHO05D000017 5.6e-09 65.1 105 34.3
Actinidia26854 Actinidia chinensis HOM05D000007 ORTHO05D000017 7.3e-09 64.7 100 40.0
Dinv11914 Davidia involucrata HOM05D000007 ORTHO05D000017 9.5e-09 64.3 98 39.8
Manes.12G062501 Manihot esculenta HOM05D000007 ORTHO05D000521 1.6e-08 63.5 91 40.7
Manes.12G062601 Manihot esculenta HOM05D000007 ORTHO05D000521 1.6e-08 63.5 91 40.7
Oeu011073.1 Olea europaea HOM05D000007 ORTHO05D000039 1.6e-08 63.5 98 31.6
Lj1C663T2 Lonicera japonica HOM05D000007 ORTHO05D000039 2.1e-08 63.2 96 35.4
Aqoxy5G03305 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 3.6e-08 62.4 88 34.1
PSO782G1055 Papaver somniferum HOM05D000007 ORTHO05D000017 3.6e-08 62.4 102 36.3
Ciclev10015426m.g Citrus clementina HOM05D000007 ORTHO05D000521 4.7e-08 62.0 99 37.4
Eucgr.K00668 Eucalyptus grandis HOM05D000007 ORTHO05D000521 4.7e-08 62.0 126 31.7
Lj1P664T40 Lonicera japonica HOM05D000007 ORTHO05D000039 4.7e-08 62.0 104 32.7
Gohir.D07G173800 Gossypium hirsutum HOM05D000007 ORTHO05D000521 8.0e-08 61.2 91 37.4
VMungo1383G2748 Vigna mungo HOM05D000007 ORTHO05D000017 8.0e-08 61.2 98 36.7
AUR62014756 Chenopodium quinoa HOM05D000007 ORTHO05D000017 1.0e-07 60.8 106 35.8
Hma1.2p1_0127F.1_g059580 Hydrangea macrophylla HOM05D000007 ORTHO05D000017 1.0e-07 60.8 100 40.0
Lj1A671T55 Lonicera japonica HOM05D000007 ORTHO05D000039 1.0e-07 60.8 94 35.1
Lj1C674T8 Lonicera japonica HOM05D000007 ORTHO05D000039 1.0e-07 60.8 94 35.1
Thecc.01G185500 Theobroma cacao HOM05D000007 ORTHO05D000521 1.0e-07 60.8 91 38.5
Cpa.g.sc136.4 Carica papaya HOM05D000007 ORTHO05D000521 1.4e-07 60.5 101 33.7
DCAR_031132 Daucus carota HOM05D000007 ORTHO05D000039 1.4e-07 60.5 96 35.4
CARHR082600 Cardamine hirsuta HOM05D000007 ORTHO05D000521 1.8e-07 60.1 75 41.3
Sabra02G0170100 Salix brachista HOM05D000007 ORTHO05D000521 1.8e-07 60.1 99 39.4
Atru.chr6.3330 Acer truncatum HOM05D000007 ORTHO05D000521 2.3e-07 59.7 91 37.4
A03p35500 Brassica napus HOM05D000007 ORTHO05D000521 2.3e-07 59.7 75 41.3
C03p43160 Brassica napus HOM05D000007 ORTHO05D000521 2.3e-07 59.7 75 41.3
BolC3t16585H Brassica oleracea HOM05D000007 ORTHO05D000521 2.3e-07 59.7 75 41.3
BraA03t12727Z Brassica rapa HOM05D000007 ORTHO05D000521 2.3e-07 59.7 75 41.3
Carub.0003s0745 Capsella rubella HOM05D000007 ORTHO05D000521 2.3e-07 59.7 75 41.3
CiPaw.03G276600 Carya illinoinensis HOM05D000007 ORTHO05D000521 2.3e-07 59.7 94 38.3
AT3G07870 Arabidopsis thaliana HOM05D000007 ORTHO05D000521 3.0e-07 59.3 75 41.3
AUR62016933 Chenopodium quinoa HOM05D000007 ORTHO05D000017 3.0e-07 59.3 97 34.0
Thhalv10020831m.g Eutrema salsugineum HOM05D000007 ORTHO05D000521 3.0e-07 59.3 75 41.3
Gohir.A07G189800 Gossypium hirsutum HOM05D000007 ORTHO05D000521 3.0e-07 59.3 91 39.6
Gohir.D07G196000 Gossypium hirsutum HOM05D000007 ORTHO05D000521 3.0e-07 59.3 91 39.6
Gorai.001G219500 Gossypium raimondii HOM05D000007 ORTHO05D000521 3.0e-07 59.3 91 39.6
Sp3g06790 Schrenkiella parvula HOM05D000007 ORTHO05D000521 3.0e-07 59.3 75 41.3
CANSAT80G1792 Cannabis sativa HOM05D000007 ORTHO05D000521 4.0e-07 58.9 103 35.9
Lju1601A0G41 Lonicera japonica HOM05D000007 ORTHO05D000039 4.0e-07 58.9 97 32.0
Duzib138G1457 Durio zibethinus HOM05D000007 ORTHO05D000521 5.2e-07 58.5 91 38.5
Manes.17G022301 Manihot esculenta HOM05D000007 ORTHO05D000521 5.2e-07 58.5 74 37.8
Peaxi162Scf00776g00005 Petunia axillaris HOM05D000007 ORTHO05D000521 5.2e-07 58.5 99 36.4
Peaxi162Scf00776g00029 Petunia axillaris HOM05D000007 ORTHO05D000521 5.2e-07 58.5 98 33.7
AL3G19240 Arabidopsis lyrata HOM05D000007 ORTHO05D000521 6.8e-07 58.2 75 40.0
Oeu025157.1 Olea europaea HOM05D000007 ORTHO05D000039 6.8e-07 58.2 75 42.7
Oeu028341.1 Olea europaea HOM05D000007 ORTHO05D000039 6.8e-07 58.2 75 42.7
TWI75G1848 Tripterygium wilfordii HOM05D000007 ORTHO05D000521 6.8e-07 58.2 99 35.4
EL10As6g23638 Beta vulgaris HOM05D000007 ORTHO05D000017 8.9e-07 57.8 101 34.7
CAN.G456.12 Capsicum annuum HOM05D000007 ORTHO05D000039 8.9e-07 57.8 97 34.0
ECA236G3121 Erigeron canadensis HOM05D000007 ORTHO05D000521 8.9e-07 57.8 74 39.2
QL08p029353 Quercus lobata HOM05D000007 ORTHO05D000521 8.9e-07 57.8 99 34.3
TWI18G1020 Tripterygium wilfordii HOM05D000007 ORTHO05D000521 1.2e-06 57.4 99 35.4
TWI60G0485 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.2e-06 57.4 102 34.3
Cfa014275 Carpinus fangiana HOM05D000007 ORTHO05D000521 1.5e-06 57.0 91 37.4
AUR62012551 Chenopodium quinoa HOM05D000007 ORTHO05D000017 1.5e-06 57.0 98 32.7
Haze_12720 Corylus avellana HOM05D000007 ORTHO05D000521 1.5e-06 57.0 91 37.4
Lsat_1_v5_gn_5_121721 Lactuca sativa HOM05D000007 ORTHO05D000521 1.5e-06 57.0 74 39.2
PSO478G2962 Papaver somniferum HOM05D000007 ORTHO05D000017 1.5e-06 57.0 98 33.7
Actinidia16812 Actinidia chinensis HOM05D000007 ORTHO05D000017 2.0e-06 56.6 96 34.4
Aa31LG5G18430 Aethionema arabicum HOM05D001152 ORTHO05D000967 2.0e-06 56.6 76 35.5
CSS0038812 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 2.0e-06 56.6 107 34.6
CSS0050410 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 2.0e-06 56.6 107 34.6
FvH4_6g40070 Fragaria vesca HOM05D000027 ORTHO05D000066 2.0e-06 56.6 103 35.0
FAN09G0423 Fragaria x ananassa HOM05D000007 ORTHO05D000017 2.0e-06 56.6 103 35.0
FAN14G1591 Fragaria x ananassa HOM05D000007 ORTHO05D000017 2.0e-06 56.6 103 35.0
Lsat_1_v5_gn_7_95360 Lactuca sativa HOM05D000007 ORTHO05D000521 2.0e-06 56.6 74 39.2
Medtr2g021800 Medicago truncatula HOM05D000007 ORTHO05D000039 2.0e-06 56.6 87 37.9
Nitab4.5_0001774g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000521 2.0e-06 56.6 90 37.8
Oeu046878.1 Olea europaea HOM05D000007 ORTHO05D000521 2.0e-06 56.6 96 35.4
PSO541G2380 Papaver somniferum HOM05D000007 ORTHO05D000676 2.0e-06 56.6 84 36.9
PSO801G0227 Papaver somniferum HOM05D000007 ORTHO05D000676 2.0e-06 56.6 76 36.8
THA.LOC104819049 Tarenaya hassleriana HOM05D000007 ORTHO05D000521 2.0e-06 56.6 97 33.0
Actinidia09174 Actinidia chinensis HOM05D000007 ORTHO05D000017 2.6e-06 56.2 100 35.0
Cpa.g.sc136.5 Carica papaya HOM05D000007 ORTHO05D000521 2.6e-06 56.2 74 44.6
Hma1.2p1_1532F.1_g289300 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 2.6e-06 56.2 94 37.2
Hma1.2p1_2053F.1_g312720 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 2.6e-06 56.2 94 37.2
PSO170G2625 Papaver somniferum HOM05D000007 ORTHO05D000017 2.6e-06 56.2 96 35.4
PSO384G1648 Papaver somniferum HOM05D000007 ORTHO05D000017 2.6e-06 56.2 101 33.7
PGR142G2144 Punica granatum HOM05D000007 ORTHO05D000521 2.6e-06 56.2 83 38.6
QL07p003322 Quercus lobata HOM05D000007 ORTHO05D000039 2.6e-06 56.2 102 33.3
EL10As6g23672 Beta vulgaris HOM05D000007 ORTHO05D000017 3.4e-06 55.8 87 34.5
Peaxi162Scf00147g01821 Petunia axillaris HOM05D000007 ORTHO05D000521 3.4e-06 55.8 98 35.7
Dinv05357 Davidia involucrata HOM05D000007 ORTHO05D000521 4.4e-06 55.5 87 37.9
Prupe.3G110000 Prunus persica HOM05D000007 ORTHO05D000039 4.4e-06 55.5 88 30.7
QL07p003229 Quercus lobata HOM05D000007 ORTHO05D000039 4.4e-06 55.5 97 35.1
SGA_v2.0_scaffold16G07720 Striga asiatica HOM05D000007 ORTHO05D000039 4.4e-06 55.5 96 27.1
CAN.G1036.9 Capsicum annuum HOM05D000007 ORTHO05D000521 5.8e-06 55.1 89 37.1
Lj1P669T8 Lonicera japonica HOM05D000007 ORTHO05D000039 5.8e-06 55.1 91 30.8
Lju1601C0T10 Lonicera japonica HOM05D000007 ORTHO05D000039 5.8e-06 55.1 98 29.6
Oeu025158.1 Olea europaea HOM05D000007 ORTHO05D000039 5.8e-06 55.1 101 33.7
PSO675G6467 Papaver somniferum HOM05D000007 ORTHO05D000017 5.8e-06 55.1 95 32.6
PSO832G2738 Papaver somniferum HOM05D000007 ORTHO05D000017 5.8e-06 55.1 101 30.7
Sabra14G0124200 Salix brachista HOM05D000007 ORTHO05D000521 5.8e-06 55.1 99 35.4
FAN11G2267 Fragaria x ananassa HOM05D000007 ORTHO05D000017 7.5e-06 54.7 106 34.9
Lj1A671T54 Lonicera japonica HOM05D000007 ORTHO05D000039 7.5e-06 54.7 96 32.3
Lj1P667T11 Lonicera japonica HOM05D000007 ORTHO05D000039 7.5e-06 54.7 91 30.8
Lj1P672T29 Lonicera japonica HOM05D000007 ORTHO05D000039 7.5e-06 54.7 91 30.8
PSO017G5170 Papaver somniferum HOM05D000007 ORTHO05D000017 7.5e-06 54.7 92 29.3
AUR62014647 Chenopodium quinoa HOM05D000007 ORTHO05D000017 9.8e-06 54.3 98 31.6
AUR62026585 Chenopodium quinoa HOM05D000007 ORTHO05D000017 9.8e-06 54.3 99 28.3
Dinv24453 Davidia involucrata HOM05D000007 ORTHO05D000039 9.8e-06 54.3 98 34.7
Duzib213G0407 Durio zibethinus HOM05D000007 ORTHO05D000017 9.8e-06 54.3 76 38.2
ECA234G0135 Erigeron canadensis HOM05D000007 ORTHO05D000521 9.8e-06 54.3 75 37.3
Hma1.2p1_1532F.1_g289320 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 9.8e-06 54.3 93 35.5
MD09G1119500 Malus domestica HOM05D000007 ORTHO05D000521 9.8e-06 54.3 74 40.5
Oeu063630.1 Olea europaea HOM05D000007 ORTHO05D000521 9.8e-06 54.3 99 36.4
PGSC0003DMG401004300 Solanum tuberosum HOM05D000007 ORTHO05D000521 9.8e-06 54.3 91 31.9


User provided reference genes

Program Settings