Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G04360 Aquilegia oxysepala HOM05D004972 ORTHO05D006309 1.4e-130 469.5 225 100.0
TAR629G1532 Trochodendron aralioides HOM05D004972 ORTHO05D006309 8.3e-99 364.0 225 76.4
MBI07_g18719_MAGBIO Magnolia biondii HOM05D004972 ORTHO05D006309 1.6e-94 349.7 228 72.8
Nn2g14330 Nelumbo nucifera HOM05D004972 ORTHO05D006309 2.0e-92 342.8 225 72.0
Ciclev10016597m.g Citrus clementina HOM05D004972 ORTHO05D006309 2.6e-92 342.4 225 72.9
Cfa008573 Carpinus fangiana HOM05D004972 ORTHO05D006309 2.7e-89 332.4 225 71.1
Manes.06G062200 Manihot esculenta HOM05D004972 ORTHO05D006309 2.7e-89 332.4 225 69.8
GSVIVG01011786001 Vitis vinifera HOM05D004972 ORTHO05D006309 2.7e-89 332.4 225 71.6
PSO063G1195 Papaver somniferum HOM05D004972 ORTHO05D006309 1.0e-88 330.5 227 69.2
PSO782G3547 Papaver somniferum HOM05D004972 ORTHO05D006309 5.0e-88 328.2 227 68.3
MD16G1031300 Malus domestica HOM05D004972 ORTHO05D006309 1.5e-87 326.6 225 68.9
MD13G1028600 Malus domestica HOM05D004972 ORTHO05D006309 1.9e-87 326.2 225 68.9
Nn6g34668 Nelumbo nucifera HOM05D004972 ORTHO05D006309 2.5e-87 325.9 225 69.8
Actinidia14945 Actinidia chinensis HOM05D004972 ORTHO05D006309 4.3e-87 325.1 225 70.2
Potri.010G115800 Populus trichocarpa HOM05D004972 ORTHO05D006309 4.3e-87 325.1 225 68.9
Actinidia15243 Actinidia chinensis HOM05D004972 ORTHO05D006309 9.5e-87 323.9 225 69.3
Actinidia36689 Actinidia chinensis HOM05D004972 ORTHO05D006309 9.5e-87 323.9 225 69.3
CiPaw.06G013900 Carya illinoinensis HOM05D004972 ORTHO05D006309 1.2e-86 323.6 227 68.7
Sc04g0005680 Simmondsia chinensis HOM05D004972 ORTHO05D006309 3.6e-86 322.0 226 69.0
TWI79G0317 Tripterygium wilfordii HOM05D004972 ORTHO05D006309 4.7e-86 321.6 225 70.2
CiPaw.05G247000 Carya illinoinensis HOM05D004972 ORTHO05D006309 6.2e-86 321.2 225 67.1
Gohir.D12G057200 Gossypium hirsutum HOM05D004972 ORTHO05D006309 6.2e-86 321.2 225 68.9
COL.COLO4_10156 Corchorus olitorius HOM05D004972 ORTHO05D006309 1.1e-85 320.5 225 68.9
Dinv16188 Davidia involucrata HOM05D004972 ORTHO05D006309 1.1e-85 320.5 225 69.3
Hma1.2p1_0114F.1_g055290 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 1.1e-85 320.5 225 69.3
Atru.chr11.981 Acer truncatum HOM05D004972 ORTHO05D006309 1.8e-85 319.7 225 68.0
CSS0013445 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 2.3e-85 319.3 226 69.9
CSS0024462 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 2.3e-85 319.3 226 69.9
Thecc.04G114900 Theobroma cacao HOM05D004972 ORTHO05D006309 4.0e-85 318.5 225 68.0
FAN07G2072 Fragaria x ananassa HOM05D004972 ORTHO05D006309 5.2e-85 318.2 225 66.7
Rhsim09G0068400 Rhododendron simsii HOM05D004972 ORTHO05D006309 5.2e-85 318.2 225 67.1
Peaxi162Scf00205g00614 Petunia axillaris HOM05D004972 ORTHO05D006309 6.8e-85 317.8 225 66.7
RcHm_v2.0_Chr4g0433731 Rosa chinensis HOM05D004972 ORTHO05D006309 1.5e-84 316.6 225 65.3
CANSAT01G2336 Cannabis sativa HOM05D004972 ORTHO05D006309 2.6e-84 315.8 225 67.1
Migut.L00755 Erythranthe guttata HOM05D004972 ORTHO05D006309 2.6e-84 315.8 225 65.8
Gohir.A07G173000 Gossypium hirsutum HOM05D004972 ORTHO05D006309 2.6e-84 315.8 225 68.0
Gohir.A12G057400 Gossypium hirsutum HOM05D004972 ORTHO05D006309 3.4e-84 315.5 225 68.0
Sed0026570 Sechium edule HOM05D004972 ORTHO05D006309 3.4e-84 315.5 225 67.1
CsaV3_5G034860 Cucumis sativus L. HOM05D004972 ORTHO05D006309 5.8e-84 314.7 225 67.6
Gohir.D07G180500 Gossypium hirsutum HOM05D004972 ORTHO05D006309 5.8e-84 314.7 225 68.0
Gorai.001G201700 Gossypium raimondii HOM05D004972 ORTHO05D006309 5.8e-84 314.7 225 68.0
AUR62014195 Chenopodium quinoa HOM05D004972 ORTHO05D006309 7.5e-84 314.3 225 67.6
Nitab4.5_0004692g0050 Nicotiana tabacum HOM05D004972 ORTHO05D006309 7.5e-84 314.3 223 66.4
FAN17G1326 Fragaria x ananassa HOM05D004972 ORTHO05D006309 9.8e-84 313.9 225 66.2
FvH4_4g26160 Fragaria vesca HOM05D004972 ORTHO05D006309 2.2e-83 312.8 225 66.2
Eucgr.G02212 Eucalyptus grandis HOM05D004972 ORTHO05D006309 2.9e-83 312.4 225 67.1
Prupe.1G321700 Prunus persica HOM05D004972 ORTHO05D006309 2.9e-83 312.4 225 67.1
FAN12G1431 Fragaria x ananassa HOM05D004972 ORTHO05D006309 3.7e-83 312.0 225 66.2
FAN12G3562 Fragaria x ananassa HOM05D004972 ORTHO05D006309 3.7e-83 312.0 225 66.2
Sopen05g004230 Solanum pennellii HOM05D004972 ORTHO05D006309 1.1e-82 310.5 225 64.9
PGSC0003DMG400030511 Solanum tuberosum HOM05D004972 ORTHO05D006309 1.1e-82 310.5 225 64.9
FAN22G0152 Fragaria x ananassa HOM05D004972 ORTHO05D006309 1.9e-82 309.7 225 64.9
Solyc05g008400.4 Solanum lycopersicum HOM05D004972 ORTHO05D006309 1.9e-82 309.7 225 64.4
Lj6C749G10 Lonicera japonica HOM05D004972 ORTHO05D006309 4.1e-82 308.5 225 68.4
THA.LOC104825471 Tarenaya hassleriana HOM05D004972 ORTHO05D006309 4.1e-82 308.5 225 65.3
Dinv05881 Davidia involucrata HOM05D004972 ORTHO05D006309 5.4e-82 308.1 224 66.5
CAN.G1693.8 Capsicum annuum HOM05D004972 ORTHO05D006309 7.1e-82 307.8 225 64.9
EL10Ac6g14241 Beta vulgaris HOM05D004972 ORTHO05D006309 2.1e-81 306.2 225 65.8
HanXRQChr07g0189871 Helianthus annuus HOM05D004972 ORTHO05D006309 2.7e-81 305.8 225 63.1
Lsat_1_v5_gn_8_42761 Lactuca sativa HOM05D004972 ORTHO05D006309 7.8e-81 304.3 225 64.4
DCAR_030202 Daucus carota HOM05D004972 ORTHO05D006309 1.3e-80 303.5 226 64.2
QL01p002347 Quercus lobata HOM05D004972 ORTHO05D006309 1.3e-80 303.5 279 55.9
Hund24992 Selenicereus undatus HOM05D004972 ORTHO05D006309 1.7e-80 303.1 260 60.0
Lalb_Chr06g0165661 Lupinus albus HOM05D004972 ORTHO05D006309 5.1e-80 301.6 225 64.0
MSTRG.882 Avicennia marina HOM05D004972 ORTHO05D006309 1.1e-79 300.4 225 63.6
SGA_v2.0_scaffold50G18531 Striga asiatica HOM05D004972 ORTHO05D006309 1.1e-79 300.4 225 64.0
Carub.0006s1141 Capsella rubella HOM05D004972 ORTHO05D006309 1.5e-79 300.1 225 64.0
Cc11_g09090 Coffea canephora HOM05D004972 ORTHO05D006309 2.5e-79 299.3 225 65.8
HanXRQChr08g0212881 Helianthus annuus HOM05D004972 ORTHO05D006309 3.3e-79 298.9 225 62.7
HPP92_015449 Vanilla planifolia HOM05D004972 ORTHO05D006309 3.3e-79 298.9 227 62.6
VMungo0720G3073 Vigna mungo HOM05D004972 ORTHO05D006309 3.3e-79 298.9 225 64.0
AL6G23850 Arabidopsis lyrata HOM05D004972 ORTHO05D006309 5.6e-79 298.1 225 64.4
Phvul.007G035700 Phaseolus vulgaris HOM05D004972 ORTHO05D006309 5.6e-79 298.1 225 64.0
AT5G13240 Arabidopsis thaliana HOM05D004972 ORTHO05D006309 1.2e-78 297.0 225 64.4
vmacro01431 Vaccinium macrocarpon HOM05D004972 ORTHO05D006309 2.8e-78 295.8 206 68.9
BcaC04g19133 Brassica carinata HOM05D004972 ORTHO05D006309 6.2e-78 294.7 225 63.1
BolC9t59224H Brassica oleracea HOM05D004972 ORTHO05D006309 6.2e-78 294.7 225 63.1
ECA233G6099 Erigeron canadensis HOM05D004972 ORTHO05D006309 6.2e-78 294.7 225 64.4
Os04g0662900 Oryza sativa ssp. japonica HOM05D004972 ORTHO05D006309 6.2e-78 294.7 225 60.0
A10p24970 Brassica napus HOM05D004972 ORTHO05D006309 8.1e-78 294.3 225 63.1
BraA10t44559Z Brassica rapa HOM05D004972 ORTHO05D006309 8.1e-78 294.3 225 63.1
SalBow8G2598 Salvia bowleyana HOM05D004972 ORTHO05D006309 8.1e-78 294.3 226 63.3
Duzib133G0650 Durio zibethinus HOM05D004972 ORTHO05D006309 1.1e-77 293.9 197 71.1
Oeu044327.1 Olea europaea HOM05D004972 ORTHO05D006309 1.1e-77 293.9 225 64.0
C09p63840 Brassica napus HOM05D004972 ORTHO05D006309 1.4e-77 293.5 225 62.7
Sp6g30750 Schrenkiella parvula HOM05D004972 ORTHO05D006309 6.8e-77 291.2 225 62.2
Thhalv10014602m.g Eutrema salsugineum HOM05D004972 ORTHO05D006309 8.9e-77 290.8 225 62.2
CARHR200210 Cardamine hirsuta HOM05D004972 ORTHO05D006309 1.5e-76 290.0 227 63.0
Lj5g0002039 Lotus japonicus HOM05D004972 ORTHO05D006309 1.7e-75 286.6 225 60.4
Medtr1g108610 Medicago truncatula HOM05D004972 ORTHO05D006309 2.2e-75 286.2 232 60.3
Ca_11105_v3 Cicer arietinum L. HOM05D004972 ORTHO05D006309 4.9e-75 285.0 225 60.9
Cpa.g.sc65.108 Carica papaya HOM05D004972 ORTHO05D006309 1.9e-74 283.1 197 68.5
Glyma.10G266000 Glycine max HOM05D004972 ORTHO05D006309 1.9e-74 283.1 225 60.9
Nitab4.5_0004092g0040 Nicotiana tabacum HOM05D004972 ORTHO05D006309 4.1e-74 282.0 266 54.9
Psat6g222200 Pisum sativum HOM05D004972 ORTHO05D006309 7.1e-74 281.2 225 60.9
TPR.G4886 Trifolium pratense HOM05D004972 ORTHO05D006309 7.1e-74 281.2 225 59.1
Haze_11044 Corylus avellana HOM05D004972 ORTHO05D006309 9.2e-74 280.8 225 62.7
CDE09G0103 Ceratophyllum demersum HOM05D004972 ORTHO05D006309 2.1e-73 279.6 227 59.9
Glyma.20G124600 Glycine max HOM05D004972 ORTHO05D006309 2.7e-73 279.3 226 60.6
SGA_v2.0_scaffold38G15047 Striga asiatica HOM05D004972 ORTHO05D006309 3.5e-73 278.9 225 59.6
Zm00001eb246210 Zea mays HOM05D004972 ORTHO05D006309 3.5e-73 278.9 210 61.0
Ah.02g128040 Amaranthus hybridus HOM05D004972 ORTHO05D006309 6.0e-73 278.1 228 60.5
Aa31LG3G14420 Aethionema arabicum HOM05D004972 ORTHO05D006309 2.5e-71 272.7 225 60.0
unitig_0.g2334 Utricularia gibba HOM05D004972 ORTHO05D006309 2.8e-70 269.2 217 58.5
arahy.Tifrunner.gnm1.ann1.DS7XTJ Arachis hypogaea HOM05D004972 ORTHO05D006309 3.6e-70 268.9 225 58.2
arahy.Tifrunner.gnm1.ann1.F2FLG1 Arachis hypogaea HOM05D004972 ORTHO05D006309 3.6e-70 268.9 225 58.7
arahy.Tifrunner.gnm1.ann1.YXX0BK Arachis hypogaea HOM05D004972 ORTHO05D006309 4.7e-70 268.5 225 58.2
SEGI_23519 Sequoiadendron giganteum HOM05D004972 ORTHO05D006309 2.2e-67 259.6 225 55.6
ATR0315G127 Amborella trichopoda HOM05D004972 ORTHO05D006309 1.4e-66 256.9 226 55.8
ClCG05G022260 Citrullus lanatus HOM05D004972 ORTHO05D006309 2.4e-66 256.1 225 57.8
PGR119G0027 Punica granatum HOM05D004972 ORTHO05D006309 6.0e-65 251.5 225 57.3
AUR62041239 Chenopodium quinoa HOM05D004972 ORTHO05D006309 3.0e-64 249.2 174 68.4
MELO3C012297.2 Cucumis melo HOM05D004972 ORTHO05D006309 3.6e-62 242.3 177 65.0
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 1.2e-60 237.3 252 52.8
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 1.2e-60 237.3 252 52.8
arahy.Tifrunner.gnm1.ann1.UKIC3J Arachis hypogaea HOM05D004972 ORTHO05D006309 4.9e-59 231.9 243 51.0
Migut.L00658 Erythranthe guttata HOM05D004972 ORTHO05D006309 1.6e-57 226.9 225 53.8
Gorai.008G060200 Gossypium raimondii HOM05D004972 ORTHO05D006309 1.5e-55 220.3 225 52.9
BolC2t06543H Brassica oleracea HOM05D004972 ORTHO05D006309 9.6e-55 217.6 229 51.5
Pp3c11_22300 Physcomitrium patens HOM05D004972 ORTHO05D006309 1.3e-54 217.2 225 49.8
Duzib138G1958 Durio zibethinus HOM05D004972 ORTHO05D006309 1.4e-53 213.8 250 49.2
AagrBONN_evm.TU.Sc2ySwM_344.4231 Anthoceros agrestis HOM05D004972 ORTHO05D006309 2.0e-52 209.9 220 49.5
Mapoly0012s0169 Marchantia polymorpha HOM05D004972 ORTHO05D006309 2.9e-51 206.1 215 50.2
Cre08.g364250 Chlamydomonas reinhardtii HOM05D004972 ORTHO05D006309 2.5e-47 193.0 224 46.4
C02p06000 Brassica napus HOM05D004972 ORTHO05D006309 4.5e-44 182.2 163 57.1
FAN17G1863 Fragaria x ananassa HOM05D004972 ORTHO05D006309 4.5e-44 182.2 122 67.2
MCO09G688 Micromonas commoda HOM05D004972 ORTHO05D006309 1.0e-43 181.0 231 43.3
PRCOL_00004209 Prasinoderma coloniale HOM05D004972 ORTHO05D006309 2.1e-38 163.3 228 40.4
CSS0034104 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 1.4e-37 160.6 100 74.0
CSS0029214 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 1.8e-37 160.2 100 74.0
BcaNung01872 Brassica carinata HOM05D004972 ORTHO05D006309 4.1e-37 159.1 130 59.2
SHI16322 Sapria himalayana HOM05D004972 ORTHO05D006309 5.1e-32 142.1 207 42.0
Pp3c7_4620 Physcomitrium patens HOM05D004972 ORTHO05D006309 3.7e-30 136.0 150 50.0
Hma1.2p1_1593F.1_g292560 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 6.1e-25 118.6 72 73.6
Zm00001eb219440 Zea mays HOM05D009386 ORTHO05D011419 8.2e-22 108.2 77 59.7
Zm00001eb025950 Zea mays HOM05D004972 ORTHO05D006309 1.8e-21 107.1 78 62.8
Gorai.001G193400 Gossypium raimondii HOM05D004972 ORTHO05D029864 9.4e-18 94.7 105 48.6
Cfa026650 Carpinus fangiana HOM05D004972 ORTHO05D006309 2.1e-17 93.6 245 32.2
Gohir.D01G091150 Gossypium hirsutum HOM05D004972 ORTHO05D029864 4.7e-17 92.4 122 45.9
Gorai.010G145600 Gossypium raimondii HOM05D004972 ORTHO05D029864 1.0e-16 91.3 79 59.5
CDE02G3434 Ceratophyllum demersum HOM05D004972 ORTHO05D000215 8.8e-16 88.2 69 65.2
CSS0010746 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 1.1e-10 71.2 51 64.7
CSS0044245 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 1.1e-10 71.2 51 64.7
CSS0040756 Camellia sinensis var. sinensis HOM05D004972 ORTHO05D006309 4.2e-10 69.3 51 62.7
Hma1.2p1_0813F.1_g222490 Hydrangea macrophylla HOM05D004972 ORTHO05D006309 5.5e-10 68.9 51 64.7
Gorai.001G223500 Gossypium raimondii HOM05D004972 ORTHO05D029864 1.6e-09 67.4 51 62.7
SEGI_16480 Sequoiadendron giganteum HOM05D004972 ORTHO05D006309 1.6e-09 67.4 51 62.7


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