Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G04345 Aquilegia oxysepala HOM05D007806 ORTHO05D009818 3.0e-234 814.7 376 100.0
GSVIVG01024230001 Vitis vinifera HOM05D007806 ORTHO05D009818 3.1e-151 538.9 343 71.4
PSO063G6352 Papaver somniferum HOM05D007806 ORTHO05D009818 2.7e-150 535.8 380 66.8
Cfa017816 Carpinus fangiana HOM05D007806 ORTHO05D009818 1.0e-149 533.9 378 68.3
Manes.01G159900 Manihot esculenta HOM05D007806 ORTHO05D009818 2.3e-149 532.7 340 71.2
Nn3g18521 Nelumbo nucifera HOM05D007806 ORTHO05D009818 2.3e-149 532.7 319 75.2
PGR044G0970 Punica granatum HOM05D007806 ORTHO05D009818 5.0e-149 531.6 326 72.7
PSO782G4489 Papaver somniferum HOM05D007806 ORTHO05D009818 6.6e-149 531.2 381 65.6
QL10p035646 Quercus lobata HOM05D007806 ORTHO05D009818 6.6e-149 531.2 378 66.4
Cpa.g.sc829.2 Carica papaya HOM05D007806 ORTHO05D009818 2.8e-147 525.8 353 68.6
TAR629G0023 Trochodendron aralioides HOM05D007806 ORTHO05D009818 1.0e-146 523.9 304 77.6
Oeu034419.1 Olea europaea HOM05D007806 ORTHO05D009818 1.8e-146 523.1 345 67.8
Medtr6g069050 Medicago truncatula HOM05D007806 ORTHO05D009818 2.3e-146 522.7 382 65.2
Potri.017G154900 Populus trichocarpa HOM05D007806 ORTHO05D009818 3.0e-146 522.3 322 71.7
Gorai.008G293400 Gossypium raimondii HOM05D007806 ORTHO05D009818 5.2e-146 521.5 318 73.0
Sed0012569 Sechium edule HOM05D007806 ORTHO05D009818 3.4e-145 518.8 322 72.7
Duzib084G0683 Durio zibethinus HOM05D007806 ORTHO05D009818 4.4e-145 518.5 318 72.3
DCAR_011398 Daucus carota HOM05D007806 ORTHO05D009818 7.5e-145 517.7 319 71.5
RcHm_v2.0_Chr7g0176861 Rosa chinensis HOM05D007806 ORTHO05D009818 7.5e-145 517.7 318 73.0
ClCG01G014670 Citrullus lanatus HOM05D007806 ORTHO05D009818 9.8e-145 517.3 383 64.0
Glyma.16G209900 Glycine max HOM05D007806 ORTHO05D009818 3.7e-144 515.4 380 64.7
Phvul.004G135900 Phaseolus vulgaris HOM05D007806 ORTHO05D009818 7.0e-143 511.1 380 64.2
Haze_18394 Corylus avellana HOM05D007806 ORTHO05D009818 2.7e-142 509.2 384 64.3
MD06G1241600 Malus domestica HOM05D007806 ORTHO05D009818 4.6e-142 508.4 318 72.6
FAN13G2940 Fragaria x ananassa HOM05D007806 ORTHO05D009818 1.7e-141 506.5 318 71.1
Peaxi162Scf00171g00027 Petunia axillaris HOM05D007806 ORTHO05D009818 3.9e-141 505.4 318 70.4
Ca_25289_v3 Cicer arietinum L. HOM05D007806 ORTHO05D009818 5.0e-141 505.0 380 63.7
FAN08G1708 Fragaria x ananassa HOM05D007806 ORTHO05D009818 5.0e-141 505.0 362 65.2
Lalb_Chr22g0354101 Lupinus albus HOM05D007806 ORTHO05D009818 5.0e-141 505.0 386 61.4
Psat1g118160 Pisum sativum HOM05D007806 ORTHO05D009818 2.5e-140 502.7 382 62.0
Prupe.5G246200 Prunus persica HOM05D007806 ORTHO05D009818 2.5e-140 502.7 318 71.7
CiPaw.16G075900 Carya illinoinensis HOM05D007806 ORTHO05D009818 3.3e-140 502.3 301 74.1
Migut.C00455 Erythranthe guttata HOM05D007806 ORTHO05D009818 5.6e-140 501.5 320 68.1
VMungo0464G0928 Vigna mungo HOM05D007806 ORTHO05D009818 2.8e-139 499.2 434 57.1
Lj2g0014387 Lotus japonicus HOM05D007806 ORTHO05D009818 3.6e-139 498.8 320 70.3
Sopen03g029810 Solanum pennellii HOM05D007806 ORTHO05D009818 1.0e-138 497.3 318 68.9
MSTRG.4314 Avicennia marina HOM05D007806 ORTHO05D009818 1.4e-138 496.9 320 69.1
ATR0124G050 Amborella trichopoda HOM05D007806 ORTHO05D009818 1.8e-138 496.5 325 69.5
Solyc03g019810.3 Solanum lycopersicum HOM05D007806 ORTHO05D009818 3.1e-138 495.7 318 68.9
CAN.G861.15 Capsicum annuum HOM05D007806 ORTHO05D009818 6.8e-138 494.6 318 68.9
SalBow2G1738 Salvia bowleyana HOM05D007806 ORTHO05D009818 8.9e-138 494.2 319 68.3
MBI06_g39055_MAGBIO Magnolia biondii HOM05D007806 ORTHO05D009818 1.2e-137 493.8 301 74.1
Nitab4.5_0004170g0010 Nicotiana tabacum HOM05D007806 ORTHO05D009818 5.8e-137 491.5 318 68.9
PGSC0003DMG400015208 Solanum tuberosum HOM05D007806 ORTHO05D009818 5.8e-137 491.5 318 68.2
MELO3C002184.2 Cucumis melo HOM05D007806 ORTHO05D009818 1.6e-134 483.4 435 56.3
Nitab4.5_0009307g0070 Nicotiana tabacum HOM05D007806 ORTHO05D009818 6.0e-134 481.5 337 64.7
Gohir.A12G272200 Gossypium hirsutum HOM05D007806 ORTHO05D009818 4.3e-132 475.3 319 69.0
EL10Ac8g18997 Beta vulgaris HOM05D007806 ORTHO05D009818 5.6e-132 474.9 318 67.0
Sc18g0002780 Simmondsia chinensis HOM05D007806 ORTHO05D009818 5.6e-132 474.9 318 67.0
CsaV3_1G007660 Cucumis sativus L. HOM05D007806 ORTHO05D009818 8.9e-130 467.6 346 64.7
AUR62028303 Chenopodium quinoa HOM05D007806 ORTHO05D009818 2.9e-128 462.6 319 65.2
arahy.Tifrunner.gnm1.ann1.T8W9V5 Arachis hypogaea HOM05D007806 ORTHO05D009818 2.4e-127 459.5 385 58.7
Os10g0492800 Oryza sativa ssp. japonica HOM05D007806 ORTHO05D009818 4.3e-124 448.7 323 61.6
Cc00_g01520 Coffea canephora HOM05D007806 ORTHO05D009818 2.1e-123 446.4 275 71.3
Gohir.D12G273000 Gossypium hirsutum HOM05D007806 ORTHO05D009818 5.2e-122 441.8 271 73.8
Thecc.03G069700 Theobroma cacao HOM05D007806 ORTHO05D009818 6.8e-122 441.4 271 72.7
Zm00001eb044870 Zea mays HOM05D007806 ORTHO05D009818 6.8e-122 441.4 323 61.0
Zm00001eb221100 Zea mays HOM05D007806 ORTHO05D009818 1.7e-120 436.8 323 60.7
Sabra17G0126600 Salix brachista HOM05D007806 ORTHO05D009818 2.1e-118 429.9 358 58.7
AUR62025297 Chenopodium quinoa HOM05D007806 ORTHO05D009818 5.6e-116 421.8 319 61.1
FAN04G0377 Fragaria x ananassa HOM05D007806 ORTHO05D009818 9.6e-116 421.0 270 70.7
Dinv11740 Davidia involucrata HOM05D007806 ORTHO05D009818 5.2e-114 415.2 320 62.5
Lj5A169T96 Lonicera japonica HOM05D007806 ORTHO05D009818 5.2e-114 415.2 278 69.8
Ciclev10021108m.g Citrus clementina HOM05D007806 ORTHO05D009818 3.4e-113 412.5 376 55.1
FAN18G2497 Fragaria x ananassa HOM05D007806 ORTHO05D009818 1.3e-112 410.6 349 58.2
AagrBONN_evm.TU.Sc2ySwM_228.2978 Anthoceros agrestis HOM05D007806 ORTHO05D009818 3.8e-112 409.1 315 57.5
Mapoly0132s0022 Marchantia polymorpha HOM05D007806 ORTHO05D009818 3.1e-106 389.4 320 52.5
Pp3c4_4360 Physcomitrium patens HOM05D007806 ORTHO05D009818 2.0e-105 386.7 320 55.6
SMO358G0653 Selaginella moellendorffii HOM05D007806 ORTHO05D009818 1.0e-101 374.4 316 54.4
Ah.14g084760 Amaranthus hybridus HOM05D007806 ORTHO05D009818 2.8e-99 366.3 245 65.7
arahy.Tifrunner.gnm1.ann1.L8FXMQ Arachis hypogaea HOM05D007806 ORTHO05D009818 3.7e-91 339.3 321 53.9
MCO09G069 Micromonas commoda HOM05D007806 ORTHO05D009818 8.2e-75 285.0 344 41.9
TPR.G13520 Trifolium pratense HOM05D007806 ORTHO05D009818 5.5e-63 245.7 140 75.7
PRCOL_00005749 Prasinoderma coloniale HOM05D007806 ORTHO05D009818 1.6e-57 227.6 375 33.6
TPR.G35264 Trifolium pratense HOM05D007806 ORTHO05D009818 4.7e-54 216.1 207 53.1
COL.COLO4_22320 Corchorus olitorius HOM05D007806 ORTHO05D009818 7.5e-52 208.8 160 61.9
Hund08555 Selenicereus undatus HOM05D007806 ORTHO05D009818 2.7e-49 200.3 127 69.3
SEGI_35085 Sequoiadendron giganteum HOM05D007806 ORTHO05D009818 7.2e-47 192.2 138 60.1
arahy.Tifrunner.gnm1.ann1.XB21YC Arachis hypogaea HOM05D007806 ORTHO05D009818 1.3e-35 154.8 132 54.5
PRCOL_00003744 Prasinoderma coloniale HOM05D007806 ORTHO05D009818 7.0e-34 149.1 297 32.7
TWI81G0807 Tripterygium wilfordii HOM05D007806 ORTHO05D009818 7.7e-33 145.6 128 55.5
Atru.chr9.53 Acer truncatum HOM05D007806 ORTHO05D009818 4.9e-27 126.3 77 72.7
Atru.chr9.50 Acer truncatum HOM05D007806 ORTHO05D009818 5.9e-25 119.4 59 86.4
Cre07.g339450 Chlamydomonas reinhardtii HOM05D007806 ORTHO05D009818 2.5e-23 114.0 85 61.2
Cre06.g271188 Chlamydomonas reinhardtii HOM05D007806 ORTHO05D009818 2.0e-20 104.4 198 32.3
GSVIVG01024233001 Vitis vinifera HOM05D000001 ORTHO05D000003 8.6e-08 62.4 43 69.8
arahy.Tifrunner.gnm1.ann1.GAXP8C Arachis hypogaea HOM05D007806 ORTHO05D009818 1.1e-07 62.0 39 64.1
Atru.chr9.51 Acer truncatum HOM05D007806 ORTHO05D009818 1.6e-06 58.2 31 71.0


User provided reference genes

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