Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G04334 Aquilegia oxysepala HOM05D006666 ORTHO05D008276 6.7e-56 220.7 132 100.0
TAR629G2781 Trochodendron aralioides HOM05D006666 ORTHO05D008276 3.1e-21 105.5 95 58.9
PSO063G5885 Papaver somniferum HOM05D006666 ORTHO05D008276 2.2e-19 99.4 94 57.4
PSO782G1773 Papaver somniferum HOM05D006666 ORTHO05D008276 2.2e-19 99.4 94 57.4
TWI81G0077 Tripterygium wilfordii HOM05D006666 ORTHO05D008276 3.8e-19 98.6 85 61.2
CSS0032824 Camellia sinensis var. sinensis HOM05D006666 ORTHO05D008276 1.1e-18 97.1 81 63.0
Glyma.10G174200 Glycine max HOM05D006666 ORTHO05D008276 1.1e-18 97.1 87 58.6
PGR083G1370 Punica granatum HOM05D006666 ORTHO05D008276 1.4e-18 96.7 80 63.8
Prupe.5G245400 Prunus persica HOM05D006666 ORTHO05D008276 1.9e-18 96.3 93 55.9
Dinv09758 Davidia involucrata HOM05D006666 ORTHO05D008276 2.5e-18 95.9 97 55.7
Eucgr.H00663 Eucalyptus grandis HOM05D006666 ORTHO05D008276 2.5e-18 95.9 91 56.0
Nn4g25066 Nelumbo nucifera HOM05D006666 ORTHO05D008276 2.5e-18 95.9 96 55.2
CiPaw.16G075700 Carya illinoinensis HOM05D006666 ORTHO05D008276 3.2e-18 95.5 97 51.5
Medtr1g077550 Medicago truncatula HOM05D006666 ORTHO05D008276 3.2e-18 95.5 86 54.7
CAN.G861.22 Capsicum annuum HOM05D006666 ORTHO05D008276 4.2e-18 95.1 83 59.0
Ca_09926_v3 Cicer arietinum L. HOM05D006666 ORTHO05D008276 5.5e-18 94.7 86 53.5
MD14G1247300 Malus domestica HOM05D006666 ORTHO05D008276 5.5e-18 94.7 108 50.9
Sc10g0008660 Simmondsia chinensis HOM05D006666 ORTHO05D008276 7.2e-18 94.4 95 56.8
Haze_18405 Corylus avellana HOM05D006666 ORTHO05D008276 9.4e-18 94.0 136 45.6
MBI06_g22566_MAGBIO Magnolia biondii HOM05D006666 ORTHO05D008276 9.4e-18 94.0 83 61.4
RcHm_v2.0_Chr7g0176901 Rosa chinensis HOM05D006666 ORTHO05D008276 9.4e-18 94.0 124 46.0
VMungo0720G1342 Vigna mungo HOM05D006666 ORTHO05D008276 9.4e-18 94.0 96 54.2
Ah.15g090740 Amaranthus hybridus HOM05D006666 ORTHO05D008276 1.2e-17 93.6 91 52.7
FvH4_5g18600 Fragaria vesca HOM05D006666 ORTHO05D008276 1.2e-17 93.6 124 46.0
FAN18G1406 Fragaria x ananassa HOM05D006666 ORTHO05D008276 1.2e-17 93.6 124 46.0
Thecc.03G072200 Theobroma cacao HOM05D006666 ORTHO05D008276 1.2e-17 93.6 80 61.2
Lalb_Chr21g0311701 Lupinus albus HOM05D006666 ORTHO05D008276 1.6e-17 93.2 134 41.8
ATR0124G047 Amborella trichopoda HOM05D006666 ORTHO05D008276 2.1e-17 92.8 96 56.2
MSTRG.11567 Avicennia marina HOM05D006666 ORTHO05D008276 2.1e-17 92.8 82 59.8
Cfa017808 Carpinus fangiana HOM05D006666 ORTHO05D008276 2.1e-17 92.8 140 45.7
Glyma.20G216200 Glycine max HOM05D006666 ORTHO05D008276 2.1e-17 92.8 87 55.2
PGSC0003DMG400015210 Solanum tuberosum HOM05D006666 ORTHO05D008276 2.1e-17 92.8 81 58.0
vmacro17828 Vaccinium macrocarpon HOM05D006666 ORTHO05D008276 2.1e-17 92.8 94 55.3
Nitab4.5_0009307g0050 Nicotiana tabacum HOM05D006666 ORTHO05D008276 2.7e-17 92.4 81 58.0
Os04g0528100 Oryza sativa ssp. japonica HOM05D006666 ORTHO05D008276 2.7e-17 92.4 88 56.8
Phvul.L006501 Phaseolus vulgaris HOM05D006666 ORTHO05D008276 2.7e-17 92.4 79 58.2
Ciclev10023646m.g Citrus clementina HOM05D006666 ORTHO05D008276 3.6e-17 92.0 80 57.5
FAN04G1657 Fragaria x ananassa HOM05D006666 ORTHO05D008276 4.7e-17 91.7 124 45.2
FAN13G2387 Fragaria x ananassa HOM05D006666 ORTHO05D008276 4.7e-17 91.7 124 45.2
Hund06740 Selenicereus undatus HOM05D006666 ORTHO05D008276 4.7e-17 91.7 120 47.5
Solyc03g019880.3 Solanum lycopersicum HOM05D006666 ORTHO05D008276 4.7e-17 91.7 81 56.8
Atru.chr9.23 Acer truncatum HOM05D006666 ORTHO05D008276 6.1e-17 91.3 80 56.2
MD06G1241100 Malus domestica HOM05D006666 ORTHO05D008276 6.1e-17 91.3 106 50.0
Nitab4.5_0008182g0010 Nicotiana tabacum HOM05D006666 ORTHO05D008276 6.1e-17 91.3 81 56.8
Sopen03g029740 Solanum pennellii HOM05D006666 ORTHO05D008276 6.1e-17 91.3 82 57.3
TPR.G8870 Trifolium pratense HOM05D006666 ORTHO05D008276 6.1e-17 91.3 86 54.7
AUR62006207 Chenopodium quinoa HOM05D006666 ORTHO05D008276 8.0e-17 90.9 89 50.6
Peaxi162Scf00171g00030 Petunia axillaris HOM05D006666 ORTHO05D008276 8.0e-17 90.9 81 56.8
SalBow5G0154 Salvia bowleyana HOM05D006666 ORTHO05D008276 8.0e-17 90.9 92 55.4
FAN08G1977 Fragaria x ananassa HOM05D006666 ORTHO05D008276 1.0e-16 90.5 124 45.2
Gohir.A07G062700 Gossypium hirsutum HOM05D006666 ORTHO05D008276 1.4e-16 90.1 96 50.0
Gorai.001G070900 Gossypium raimondii HOM05D006666 ORTHO05D008276 1.4e-16 90.1 96 50.0
EL10Ac7g16891 Beta vulgaris HOM05D006666 ORTHO05D008276 1.8e-16 89.7 88 51.1
AUR62037011 Chenopodium quinoa HOM05D006666 ORTHO05D008276 1.8e-16 89.7 89 50.6
SalBow1G4610 Salvia bowleyana HOM05D006666 ORTHO05D008276 1.8e-16 89.7 66 66.7
Lj5g0025802 Lotus japonicus HOM05D006666 ORTHO05D008276 2.3e-16 89.4 79 57.0
Manes.02G219900 Manihot esculenta HOM05D006666 ORTHO05D008276 2.3e-16 89.4 81 56.8
Cc00_g07700 Coffea canephora HOM05D006666 ORTHO05D008276 3.0e-16 89.0 81 55.6
Lsat_1_v5_gn_8_1660 Lactuca sativa HOM05D006666 ORTHO05D008276 3.0e-16 89.0 99 52.5
Potri.004G066900 Populus trichocarpa HOM05D006666 ORTHO05D008276 3.0e-16 89.0 97 52.6
BcaC05g26820 Brassica carinata HOM05D006666 ORTHO05D008276 3.9e-16 88.6 133 42.1
C05p26900 Brassica napus HOM05D006666 ORTHO05D008276 3.9e-16 88.6 133 42.1
BolC5t31408H Brassica oleracea HOM05D006666 ORTHO05D008276 3.9e-16 88.6 133 42.1
Hma1.2p1_0816F.1_g222970 Hydrangea macrophylla HOM05D006666 ORTHO05D008276 6.7e-16 87.8 69 65.2
HPP92_021068 Vanilla planifolia HOM05D006666 ORTHO05D008276 6.7e-16 87.8 133 42.1
Sp1g24340 Schrenkiella parvula HOM05D006666 ORTHO05D008276 8.8e-16 87.4 84 53.6
BcaC06g35338 Brassica carinata HOM05D006666 ORTHO05D008276 2.0e-15 86.3 80 53.8
C07p17240 Brassica napus HOM05D006666 ORTHO05D008276 2.0e-15 86.3 80 53.8
BolC7t42228H Brassica oleracea HOM05D006666 ORTHO05D008276 2.0e-15 86.3 80 53.8
CARHR027620 Cardamine hirsuta HOM05D006666 ORTHO05D008276 2.0e-15 86.3 80 56.2
CDE06G1954 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 2.0e-15 86.3 95 55.8
Duzib205G1681 Durio zibethinus HOM05D006666 ORTHO05D008276 2.0e-15 86.3 97 49.5
AL1G41680 Arabidopsis lyrata HOM05D006666 ORTHO05D008276 3.3e-15 85.5 80 55.0
AT1G28150 Arabidopsis thaliana HOM05D006666 ORTHO05D008276 3.3e-15 85.5 80 55.0
Gohir.D07G067300 Gossypium hirsutum HOM05D006666 ORTHO05D008276 3.3e-15 85.5 92 50.0
THA.LOC104812606 Tarenaya hassleriana HOM05D006666 ORTHO05D008276 3.3e-15 85.5 81 55.6
Psat6g054440 Pisum sativum HOM05D006666 ORTHO05D008276 4.4e-15 85.1 123 49.6
A07p11450 Brassica napus HOM05D006666 ORTHO05D008276 7.4e-15 84.3 80 52.5
BraA07t28933Z Brassica rapa HOM05D006666 ORTHO05D008276 7.4e-15 84.3 80 52.5
BraA09t39302Z Brassica rapa HOM05D006666 ORTHO05D008276 7.4e-15 84.3 81 54.3
Migut.O00284 Erythranthe guttata HOM05D006666 ORTHO05D008276 7.4e-15 84.3 84 52.4
SGA_v2.0_scaffold25G10726 Striga asiatica HOM05D006666 ORTHO05D008276 7.4e-15 84.3 80 55.0
HanXRQChr05g0141151 Helianthus annuus HOM05D006666 ORTHO05D008276 9.7e-15 84.0 105 47.6
BcaB03g13950 Brassica carinata HOM05D006666 ORTHO05D008276 1.3e-14 83.6 80 52.5
Actinidia02653 Actinidia chinensis HOM05D006666 ORTHO05D008276 1.7e-14 83.2 80 56.2
Rhsim08G0006200 Rhododendron simsii HOM05D006666 ORTHO05D008276 1.7e-14 83.2 96 52.1
GSVIVG01024243001 Vitis vinifera HOM05D006666 ORTHO05D008276 1.7e-14 83.2 79 57.0
Aa31sc45G80 Aethionema arabicum HOM05D006666 ORTHO05D008276 2.2e-14 82.8 80 53.8
A09p37900 Brassica napus HOM05D006666 ORTHO05D008276 2.2e-14 82.8 81 53.1
MELO3C001965.2 Cucumis melo HOM05D006666 ORTHO05D008276 2.8e-14 82.4 75 60.0
DCAR_011403 Daucus carota HOM05D006666 ORTHO05D008276 2.8e-14 82.4 79 51.9
CDE04G3444 Ceratophyllum demersum HOM05D006666 ORTHO05D008276 3.7e-14 82.0 96 54.2
ECA233G5286 Erigeron canadensis HOM05D006666 ORTHO05D008276 3.7e-14 82.0 72 56.9
SEGI_19522 Sequoiadendron giganteum HOM05D006666 ORTHO05D008276 4.8e-14 81.6 78 56.4
ClCG04G012450 Citrullus lanatus HOM05D006666 ORTHO05D008276 6.3e-14 81.3 53 67.9
Thhalv10009115m.g Eutrema salsugineum HOM05D006666 ORTHO05D008276 6.3e-14 81.3 81 53.1
SMO143G0007 Selaginella moellendorffii HOM05D006666 ORTHO05D008276 1.4e-13 80.1 78 52.6
arahy.Tifrunner.gnm1.ann1.UGS5Z8 Arachis hypogaea HOM05D006666 ORTHO05D008276 1.8e-13 79.7 101 44.6
Carub.0001s2658 Capsella rubella HOM05D006666 ORTHO05D008276 1.8e-13 79.7 76 55.3
CsaV3_1G005250 Cucumis sativus L. HOM05D006666 ORTHO05D008276 1.8e-13 79.7 80 56.2
Sed0024015 Sechium edule HOM05D006666 ORTHO05D008276 2.4e-13 79.3 53 66.0
unitig_749.g13724 Utricularia gibba HOM05D006666 ORTHO05D008276 5.3e-13 78.2 127 44.9
AagrBONN_evm.TU.Sc2ySwM_344.686 Anthoceros agrestis HOM05D006666 ORTHO05D008276 5.9e-12 74.7 49 71.4
Pp3c19_21970 Physcomitrium patens HOM05D006666 ORTHO05D008276 1.0e-11 73.9 47 66.0
QL10p036477 Quercus lobata HOM05D006666 ORTHO05D008276 2.2e-11 72.8 88 44.3
Mapoly0096s0047 Marchantia polymorpha HOM05D006666 ORTHO05D008276 2.9e-11 72.4 58 60.3
QL10p036089 Quercus lobata HOM05D006666 ORTHO05D008276 5.0e-11 71.6 67 55.2
COL.COLO4_25502 Corchorus olitorius HOM05D006666 ORTHO05D008276 2.5e-10 69.3 60 58.3
Oeu038394.2 Olea europaea HOM05D006666 ORTHO05D008276 2.5e-10 69.3 62 54.8
Sabra04G0044800 Salix brachista HOM05D006666 ORTHO05D008276 3.2e-10 68.9 63 57.1
Sabra11G0106200 Salix brachista HOM05D006666 ORTHO05D008276 3.2e-10 68.9 63 57.1
Sabra17G0092500 Salix brachista HOM05D006666 ORTHO05D008276 3.2e-10 68.9 63 57.1
MCO08G267 Micromonas commoda HOM05D006666 ORTHO05D008276 1.2e-07 60.5 73 46.6
PRCOL_00004364 Prasinoderma coloniale HOM05D006666 ORTHO05D008276 3.7e-06 55.5 46 52.2
Cre03.g203800 Chlamydomonas reinhardtii HOM05D006666 ORTHO05D008276 8.2e-06 54.3 49 53.1


User provided reference genes

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