Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G04295 Aquilegia oxysepala HOM05D007187 ORTHO05D009219 2.1e-49 198.7 104 100.0
Aqoxy3G04293 Aquilegia oxysepala HOM05D007187 ORTHO05D009219 3.1e-40 168.3 87 98.9
Aqoxy3G04047 Aquilegia oxysepala HOM05D007187 ORTHO05D009219 3.5e-28 128.3 92 77.2
Nn4g24583 Nelumbo nucifera HOM05D007187 ORTHO05D009219 3.5e-28 128.3 104 65.4
Cfa020663 Carpinus fangiana HOM05D007187 ORTHO05D009219 6.7e-27 124.0 103 67.0
ECA238G2937 Erigeron canadensis HOM05D007187 ORTHO05D009219 6.7e-27 124.0 101 66.3
HanXRQChr01g0002671 Helianthus annuus HOM05D007187 ORTHO05D009219 6.7e-27 124.0 101 66.3
GSVIVG01000394001 Vitis vinifera HOM05D007187 ORTHO05D009219 8.7e-27 123.6 104 64.4
PSO063G6433 Papaver somniferum HOM05D007187 ORTHO05D009219 1.5e-26 122.9 104 62.5
Lsat_1_v5_gn_2_15080 Lactuca sativa HOM05D007187 ORTHO05D009219 3.3e-26 121.7 101 64.4
Actinidia34651 Actinidia chinensis HOM05D007187 ORTHO05D009219 5.7e-26 120.9 104 64.4
TAR629G1287 Trochodendron aralioides HOM05D007187 ORTHO05D009219 5.7e-26 120.9 105 62.9
PSO782G3824 Papaver somniferum HOM05D007187 ORTHO05D009219 9.6e-26 120.2 104 60.6
Ciclev10020853m.g Citrus clementina HOM05D007187 ORTHO05D009219 3.7e-25 118.2 101 63.4
Hma1.2p1_0471F.1_g159290 Hydrangea macrophylla HOM05D007187 ORTHO05D009219 6.2e-25 117.5 101 60.4
Sabra15G0027300 Salix brachista HOM05D007187 ORTHO05D009219 6.2e-25 117.5 103 63.1
ATR0598G346 Amborella trichopoda HOM05D007187 ORTHO05D009219 8.2e-25 117.1 105 61.0
Manes.14G173900 Manihot esculenta HOM05D007187 ORTHO05D009219 1.1e-24 116.7 103 61.2
DCAR_014735 Daucus carota HOM05D007187 ORTHO05D009219 3.1e-24 115.2 101 61.4
Sed0020940 Sechium edule HOM05D007187 ORTHO05D009219 3.1e-24 115.2 100 64.0
CAN.G637.26 Capsicum annuum HOM05D007187 ORTHO05D009219 4.1e-24 114.8 97 68.0
QL10p033296 Quercus lobata HOM05D007187 ORTHO05D009219 4.1e-24 114.8 103 61.2
QL93p0156_0017 Quercus lobata HOM05D007187 ORTHO05D009219 4.1e-24 114.8 103 61.2
CsaV3_1G007400 Cucumis sativus L. HOM05D007187 ORTHO05D009219 5.3e-24 114.4 97 66.0
MELO3C002156.2 Cucumis melo HOM05D007187 ORTHO05D009219 1.2e-23 113.2 102 63.7
PGR083G1346 Punica granatum HOM05D007187 ORTHO05D009219 1.2e-23 113.2 95 65.3
PGSC0003DMG400031050 Solanum tuberosum HOM05D007187 ORTHO05D009219 1.5e-23 112.8 99 63.6
ClCG04G010390 Citrullus lanatus HOM05D007187 ORTHO05D009219 2.0e-23 112.5 97 64.9
Peaxi162Scf00171g00732 Petunia axillaris HOM05D007187 ORTHO05D009219 2.0e-23 112.5 97 62.9
Phvul.002G332600 Phaseolus vulgaris HOM05D007187 ORTHO05D009219 2.0e-23 112.5 101 59.4
Solyc03g098110.4 Solanum lycopersicum HOM05D007187 ORTHO05D009219 2.0e-23 112.5 97 66.0
TWI15G0155 Tripterygium wilfordii HOM05D007187 ORTHO05D009219 2.0e-23 112.5 103 58.3
Eucgr.H00587 Eucalyptus grandis HOM05D007187 ORTHO05D009219 3.4e-23 111.7 103 61.2
Sopen03g028810 Solanum pennellii HOM05D007187 ORTHO05D009219 3.4e-23 111.7 97 64.9
MD06G1234700 Malus domestica HOM05D007187 ORTHO05D009219 4.5e-23 111.3 98 60.2
Prupe.5G239500 Prunus persica HOM05D007187 ORTHO05D009219 4.5e-23 111.3 98 60.2
Thecc.03G067300 Theobroma cacao HOM05D007187 ORTHO05D009219 5.8e-23 110.9 103 58.3
HPP92_026739 Vanilla planifolia HOM05D007187 ORTHO05D009219 1.0e-22 110.2 96 63.5
arahy.Tifrunner.gnm1.ann1.RE1P9T Arachis hypogaea HOM05D007187 ORTHO05D009219 1.3e-22 109.8 101 59.4
arahy.Tifrunner.gnm1.ann1.ZBK6XN Arachis hypogaea HOM05D007187 ORTHO05D009219 1.3e-22 109.8 101 59.4
RcHm_v2.0_Chr7g0177701 Rosa chinensis HOM05D007187 ORTHO05D009219 1.3e-22 109.8 96 60.4
TPR.G1397 Trifolium pratense HOM05D007187 ORTHO05D009219 1.7e-22 109.4 101 58.4
FAN13G0144 Fragaria x ananassa HOM05D007187 ORTHO05D009219 2.2e-22 109.0 96 60.4
HPP92_016177 Vanilla planifolia HOM05D007187 ORTHO05D009219 2.2e-22 109.0 96 62.5
Rhsim08G0113600 Rhododendron simsii HOM05D007187 ORTHO05D009219 2.9e-22 108.6 101 59.4
AL2G33240 Arabidopsis lyrata HOM05D007187 ORTHO05D009219 3.8e-22 108.2 98 61.2
Cc04_g09730 Coffea canephora HOM05D007187 ORTHO05D009219 5.0e-22 107.8 95 64.2
Carub.0002s2020 Capsella rubella HOM05D007187 ORTHO05D009219 8.4e-22 107.1 98 60.2
VMungo0251G3256 Vigna mungo HOM05D007187 ORTHO05D009219 8.4e-22 107.1 101 57.4
AT1G73470 Arabidopsis thaliana HOM05D007187 ORTHO05D009219 1.4e-21 106.3 99 61.6
A02p18740 Brassica napus HOM05D007187 ORTHO05D009219 1.9e-21 105.9 98 61.2
C02p31110 Brassica napus HOM05D007187 ORTHO05D009219 1.9e-21 105.9 98 61.2
Thhalv10018766m.g Eutrema salsugineum HOM05D007187 ORTHO05D009219 1.9e-21 105.9 98 60.2
Aa31LG4G3710 Aethionema arabicum HOM05D007187 ORTHO05D009219 2.5e-21 105.5 97 59.8
Sp5g28650 Schrenkiella parvula HOM05D007187 ORTHO05D009219 2.5e-21 105.5 98 59.2
LjContig00484g0006565 Lotus japonicus HOM05D007187 ORTHO05D009219 4.2e-21 104.8 101 56.4
Migut.O00232 Erythranthe guttata HOM05D007187 ORTHO05D009219 2.1e-20 102.4 94 62.8
Gohir.D07G065800 Gossypium hirsutum HOM05D007187 ORTHO05D009219 2.1e-20 102.4 97 58.8
Gorai.001G069400 Gossypium raimondii HOM05D007187 ORTHO05D009219 2.1e-20 102.4 97 58.8
Gohir.A07G061100 Gossypium hirsutum HOM05D007187 ORTHO05D009219 6.1e-20 100.9 97 57.7
BraA02t06916Z Brassica rapa HOM05D007187 ORTHO05D009219 7.9e-20 100.5 103 58.3
BolC2t09155H Brassica oleracea HOM05D007187 ORTHO05D009219 1.3e-19 99.8 103 58.3
Nitab4.5_0000936g0080 Nicotiana tabacum HOM05D007187 ORTHO05D009219 1.3e-19 99.8 90 62.2
Nitab4.5_0004454g0040 Nicotiana tabacum HOM05D007187 ORTHO05D009219 1.3e-19 99.8 89 64.0
SGA_v2.0_scaffold90G27781 Striga asiatica HOM05D007187 ORTHO05D009219 3.0e-19 98.6 94 60.6
Lj5C164T17 Lonicera japonica HOM05D007187 ORTHO05D009219 5.1e-19 97.8 119 47.9
Nitab4.5_0000021g0400 Nicotiana tabacum HOM05D007187 ORTHO05D009219 1.1e-18 96.7 88 62.5
MSTRG.10865 Avicennia marina HOM05D007187 ORTHO05D009219 1.5e-18 96.3 96 58.3
Atru.chr9.1590 Acer truncatum HOM05D007187 ORTHO05D009219 2.5e-18 95.5 93 55.9
SalBow5G2942 Salvia bowleyana HOM05D007187 ORTHO05D009219 1.6e-17 92.8 102 52.9
SMO137G0317 Selaginella moellendorffii HOM05D007187 ORTHO05D009219 1.6e-17 92.8 96 50.0
Pp3c24_15180 Physcomitrium patens HOM05D007187 ORTHO05D009219 1.8e-16 89.4 96 46.9
MD14G1241900 Malus domestica HOM05D007187 ORTHO05D009219 5.3e-16 87.8 82 61.0
SMO134G0127 Selaginella moellendorffii HOM05D007187 ORTHO05D009219 6.9e-16 87.4 98 49.0
MSTRG.11527 Avicennia marina HOM05D007187 ORTHO05D009219 2.0e-15 85.9 87 57.5
SEGI_30595 Sequoiadendron giganteum HOM05D007187 ORTHO05D009219 2.6e-15 85.5 105 44.8
Haze_18954 Corylus avellana HOM05D007187 ORTHO05D009219 1.3e-14 83.2 73 65.8
AagrBONN_evm.TU.Sc2ySwM_228.159 Anthoceros agrestis HOM05D007187 ORTHO05D009219 1.7e-14 82.8 96 44.8
CBR_g23710 Chara braunii HOM05D000019 ORTHO05D000002 6.5e-14 80.9 96 45.8
vmacro17853 Vaccinium macrocarpon HOM05D007187 ORTHO05D009219 5.5e-13 77.8 101 49.5
FAN08G0101 Fragaria x ananassa HOM05D007187 ORTHO05D009219 9.4e-13 77.0 79 55.7
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 4.6e-12 74.7 84 51.2
Mapoly0047s0078 Marchantia polymorpha HOM05D007187 ORTHO05D009219 1.8e-11 72.8 96 43.8
EL10Ac8g19490 Beta vulgaris HOM05D007187 ORTHO05D009219 7.4e-10 67.4 44 75.0
Hund22370 Selenicereus undatus HOM05D007187 ORTHO05D009219 6.3e-09 64.3 95 47.4
Lsat_1_v5_gn_7_15721 Lactuca sativa HOM05D007187 ORTHO05D009219 4.5e-07 58.2 36 77.8
Lsat_1_v5_gn_3_52400 Lactuca sativa HOM05D007187 ORTHO05D009219 1.3e-06 56.6 46 60.9
Hma1.2p1_0471F.1_g159280 Hydrangea macrophylla HOM05D007187 ORTHO05D009219 5.0e-06 54.7 47 59.6


User provided reference genes

Program Settings