Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 1.2e-121 439.9 226 100.0
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 2.1e-94 349.4 220 79.5
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 2.1e-94 349.4 222 77.9
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 1.1e-93 347.1 218 79.8
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 6.8e-93 344.4 241 74.3
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 1.2e-92 343.6 218 78.9
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 2.0e-92 342.8 221 76.0
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 2.6e-92 342.4 222 77.5
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 3.4e-92 342.0 221 79.2
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 4.4e-92 341.7 221 77.8
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 5.8e-92 341.3 226 76.5
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 2.9e-91 339.0 218 77.5
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 4.9e-91 338.2 220 78.6
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 4.9e-91 338.2 222 77.0
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 1.1e-90 337.0 207 82.1
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 3.2e-90 335.5 222 75.7
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 4.1e-90 335.1 222 77.9
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 7.1e-90 334.3 222 76.6
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 9.2e-90 334.0 222 75.7
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 9.2e-90 334.0 222 75.7
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 1.2e-89 333.6 222 73.4
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 1.6e-89 333.2 219 75.8
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 2.7e-89 332.4 218 76.1
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 3.5e-89 332.0 218 78.9
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 6.0e-89 331.3 224 75.4
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 7.8e-89 330.9 224 74.1
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 1.7e-88 329.7 222 74.8
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 1.7e-88 329.7 222 74.8
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 2.3e-88 329.3 220 73.6
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 2.3e-88 329.3 218 75.7
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 2.3e-88 329.3 212 77.4
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 2.3e-88 329.3 222 74.3
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 5.1e-88 328.2 226 76.1
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 1.5e-87 326.6 219 75.3
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 2.5e-87 325.9 218 73.9
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 5.6e-87 324.7 227 74.9
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 5.6e-87 324.7 222 73.4
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 7.3e-87 324.3 221 73.8
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 9.6e-87 323.9 222 72.5
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 2.8e-86 322.4 221 75.1
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 4.7e-86 321.6 219 74.0
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 6.2e-86 321.2 219 71.7
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 6.2e-86 321.2 222 74.3
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 2.4e-85 319.3 219 73.1
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 2.4e-85 319.3 218 73.9
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 3.1e-85 318.9 228 73.7
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 4.0e-85 318.5 222 73.4
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 5.2e-85 318.2 231 71.4
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 6.8e-85 317.8 217 71.9
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 8.9e-85 317.4 212 75.9
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 8.9e-85 317.4 221 71.0
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 1.2e-84 317.0 222 71.2
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 4.4e-84 315.1 213 72.8
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 4.4e-84 315.1 222 73.4
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 4.4e-84 315.1 222 73.9
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 4.4e-84 315.1 224 71.9
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 5.8e-84 314.7 212 73.6
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 7.6e-84 314.3 221 71.0
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 9.9e-84 313.9 222 71.6
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 1.3e-83 313.5 212 73.1
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 1.7e-83 313.2 213 72.8
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 4.9e-83 311.6 216 72.2
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 4.9e-83 311.6 216 72.2
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 1.4e-82 310.1 216 71.8
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 1.9e-82 309.7 216 71.8
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 1.2e-81 307.0 222 69.8
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 3.5e-81 305.4 224 71.9
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 3.5e-81 305.4 243 65.8
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 4.6e-81 305.1 222 72.1
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 1.0e-80 303.9 200 77.0
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 1.3e-80 303.5 221 68.8
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 8.7e-80 300.8 216 69.9
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 8.7e-80 300.8 216 69.9
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 1.5e-79 300.1 246 66.3
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 5.6e-79 298.1 227 68.7
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 2.1e-78 296.2 255 65.1
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 1.8e-77 293.1 214 68.2
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 6.9e-77 291.2 214 68.2
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 1.2e-76 290.4 223 67.7
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 4.4e-76 288.5 220 68.2
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 1.9e-74 283.1 193 73.1
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 2.4e-74 282.7 258 61.6
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 4.2e-74 282.0 193 73.1
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 4.2e-74 282.0 223 65.5
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 1.7e-72 276.6 211 68.2
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 3.0e-72 275.8 219 67.6
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 1.1e-71 273.9 221 63.8
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 3.3e-71 272.3 244 62.7
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 5.6e-71 271.6 220 64.5
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 1.8e-69 266.5 226 63.7
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 6.9e-69 264.6 205 68.8
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 9.0e-69 264.2 178 71.9
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 4.5e-68 261.9 207 64.7
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 5.8e-68 261.5 226 62.8
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 6.9e-61 238.0 217 59.0
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 2.0e-60 236.5 271 52.8
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 2.6e-60 236.1 208 61.1
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 1.3e-59 233.8 153 79.1
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 3.2e-58 229.2 154 74.0
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 6.7e-56 221.5 225 54.7
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 6.7e-56 221.5 157 71.3
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 1.9e-55 219.9 206 59.2
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 6.9e-53 211.5 229 53.7
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 1.8e-48 196.8 161 64.0
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 2.3e-48 196.4 224 50.4
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 2.5e-47 193.0 143 67.1
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 3.8e-43 179.1 199 54.8
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 1.4e-40 170.6 223 44.8
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 4.3e-39 165.6 390 33.3
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 2.4e-37 159.8 150 54.7
QL03p044200 Quercus lobata HOM05D006333 ORTHO05D007799 5.9e-36 155.2 85 85.9
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 2.7e-33 146.4 104 71.2
Ah.05g173900 Amaranthus hybridus HOM05D006333 ORTHO05D007799 3.2e-26 122.9 84 70.2
Thecc.08G107200 Theobroma cacao HOM05D006333 ORTHO05D007799 3.5e-20 102.8 82 64.6
Haze_06289 Corylus avellana HOM05D006333 ORTHO05D007799 1.7e-19 100.5 51 92.2
Oeu044913.1 Olea europaea HOM05D006333 ORTHO05D007799 8.5e-19 98.2 64 81.2
SalBow1G0042 Salvia bowleyana HOM05D006333 ORTHO05D007799 5.5e-18 95.5 65 72.3
Haze_18642 Corylus avellana HOM05D006333 ORTHO05D007799 1.2e-17 94.4 71 67.6
Aa31sc968G10 Aethionema arabicum HOM05D006333 ORTHO05D007799 2.1e-17 93.6 145 42.1
Cpa.g.sc0.136 Carica papaya HOM05D006333 ORTHO05D007799 5.2e-16 89.0 60 73.3
QL03p044193 Quercus lobata HOM05D006333 ORTHO05D007799 1.1e-13 81.3 98 46.9
MBI06_g42292_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 7.7e-12 75.1 59 67.8
TAR629G1621 Trochodendron aralioides HOM05D006333 ORTHO05D007799 1.7e-11 73.9 58 69.0
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 1.5e-10 70.9 98 43.9
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 1.5e-10 70.9 190 30.5
Aa31LG4G11880 Aethionema arabicum HOM05D006333 ORTHO05D007799 8.8e-08 61.6 54 57.4
Aa31sc286G50 Aethionema arabicum HOM05D006333 ORTHO05D007799 4.4e-07 59.3 37 78.4


User provided reference genes

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