Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy2G01745 Aquilegia oxysepala HOM05D006429 ORTHO05D008173 5.0e-54 214.2 106 100.0
Aqoxy3G04235 Aquilegia oxysepala HOM05D006429 ORTHO05D008173 5.0e-54 214.2 106 100.0
Aqoxy7G02159 Aquilegia oxysepala HOM05D006429 ORTHO05D008173 3.6e-12 75.1 56 75.0
Dinv30158 Davidia involucrata HOM05D006429 ORTHO05D008173 7.6e-10 67.4 56 66.1
PSO170G4475 Papaver somniferum HOM05D006429 ORTHO05D008173 7.6e-10 67.4 56 64.3
PSO455G0002 Papaver somniferum HOM05D006429 ORTHO05D008173 7.6e-10 67.4 56 64.3
ClCG05G017010 Citrullus lanatus HOM05D006429 ORTHO05D008173 1.3e-09 66.6 56 66.1
TAR626G0443 Trochodendron aralioides HOM05D006429 ORTHO05D008173 1.3e-09 66.6 56 66.1
Duzib187G0955 Durio zibethinus HOM05D006429 ORTHO05D008173 2.2e-09 65.9 56 64.3
Gohir.D07G031600 Gossypium hirsutum HOM05D006429 ORTHO05D008173 2.2e-09 65.9 56 64.3
TWI32G0327 Tripterygium wilfordii HOM05D006429 ORTHO05D008173 2.2e-09 65.9 56 64.3
QL02p022136 Quercus lobata HOM05D006429 ORTHO05D008173 2.9e-09 65.5 56 66.1
Thecc.09G027300 Theobroma cacao HOM05D006429 ORTHO05D008173 4.9e-09 64.7 56 62.5
Sed0015882 Sechium edule HOM05D006429 ORTHO05D008173 6.4e-09 64.3 56 62.5
GSVIVG01035836001 Vitis vinifera HOM05D006429 ORTHO05D008173 6.4e-09 64.3 56 64.3
CSS0016076 Camellia sinensis var. sinensis HOM05D006429 ORTHO05D008173 8.4e-09 63.9 56 64.3
Gorai.001G033000 Gossypium raimondii HOM05D006429 ORTHO05D008173 8.4e-09 63.9 56 62.5
CiPaw.08G012100 Carya illinoinensis HOM05D006429 ORTHO05D008173 1.1e-08 63.5 56 58.9
Haze_21537 Corylus avellana HOM05D006429 ORTHO05D008173 1.1e-08 63.5 56 62.5
MBI01_g37798_MAGBIO Magnolia biondii HOM05D006429 ORTHO05D008173 1.1e-08 63.5 55 65.5
CsaV3_3G046490 Cucumis sativus L. HOM05D006429 ORTHO05D008173 1.4e-08 63.2 56 62.5
Hma1.2p1_0007F.1_g004980 Hydrangea macrophylla HOM05D006429 ORTHO05D008173 1.4e-08 63.2 55 63.6
Hma1.2p1_0007F.1_g004990 Hydrangea macrophylla HOM05D006429 ORTHO05D008173 1.4e-08 63.2 55 63.6
COL.COLO4_18834 Corchorus olitorius HOM05D006429 ORTHO05D008173 1.9e-08 62.8 56 58.9
MELO3C003691.2 Cucumis melo HOM05D006429 ORTHO05D008173 1.9e-08 62.8 56 60.7
Gohir.A07G027600 Gossypium hirsutum HOM05D006429 ORTHO05D008173 1.9e-08 62.8 56 62.5
Manes.03G016200 Manihot esculenta HOM05D006429 ORTHO05D008173 4.1e-08 61.6 56 60.7
Rhsim07G0157100 Rhododendron simsii HOM05D006429 ORTHO05D008173 4.1e-08 61.6 56 62.5
AUR62024907 Chenopodium quinoa HOM05D006429 ORTHO05D008173 5.4e-08 61.2 56 60.7
Glyma.17G209600 Glycine max HOM05D006429 ORTHO05D008173 5.4e-08 61.2 56 58.9
Nn8g39429 Nelumbo nucifera HOM05D006429 ORTHO05D008173 5.4e-08 61.2 56 60.7
Cpa.g.sc115.3 Carica papaya HOM05D006429 ORTHO05D008173 7.1e-08 60.8 55 61.8
Eucgr.C02791 Eucalyptus grandis HOM05D006429 ORTHO05D008173 7.1e-08 60.8 56 58.9
vmacro05185 Vaccinium macrocarpon HOM05D006429 ORTHO05D008173 7.1e-08 60.8 56 60.7
MSTRG.1719 Avicennia marina HOM05D006429 ORTHO05D008173 9.2e-08 60.5 56 58.9
Cfa013165 Carpinus fangiana HOM05D006429 ORTHO05D008173 9.2e-08 60.5 56 60.7
AUR62030635 Chenopodium quinoa HOM05D006429 ORTHO05D008173 9.2e-08 60.5 56 60.7
Potri.006G252300 Populus trichocarpa HOM05D006429 ORTHO05D008173 9.2e-08 60.5 55 60.0
Prupe.1G479100 Prunus persica HOM05D006429 ORTHO05D008173 9.2e-08 60.5 56 57.1
Medtr1g012370 Medicago truncatula HOM05D006429 ORTHO05D008173 1.2e-07 60.1 56 57.1
Sabra06G0197200 Salix brachista HOM05D006429 ORTHO05D008173 1.2e-07 60.1 55 58.2
Nitab4.5_0000109g0260 Nicotiana tabacum HOM05D006429 ORTHO05D008173 1.6e-07 59.7 56 60.7
Nitab4.5_0005761g0100 Nicotiana tabacum HOM05D006429 ORTHO05D008173 1.6e-07 59.7 56 60.7
MD08G1148100 Malus domestica HOM05D006429 ORTHO05D008173 2.1e-07 59.3 56 55.4
SalBow1G3525 Salvia bowleyana HOM05D006429 ORTHO05D008173 2.1e-07 59.3 56 58.9
THA.LOC104803671 Tarenaya hassleriana HOM05D006429 ORTHO05D008173 2.1e-07 59.3 56 55.4
TPR.G15678 Trifolium pratense HOM05D006429 ORTHO05D008173 2.1e-07 59.3 56 55.4
Ah.12g064110 Amaranthus hybridus HOM05D006429 ORTHO05D008173 2.7e-07 58.9 56 57.1
Ca_12935_v3 Cicer arietinum L. HOM05D006429 ORTHO05D008173 2.7e-07 58.9 56 55.4
Atru.chr7.2397 Acer truncatum HOM05D006429 ORTHO05D008173 3.5e-07 58.5 56 58.9
Peaxi162Scf00643g00324 Petunia axillaris HOM05D006429 ORTHO05D008173 3.5e-07 58.5 56 58.9
Ciclev10008199m.g Citrus clementina HOM05D006429 ORTHO05D008173 4.6e-07 58.2 55 58.2
SGA_v2.0_scaffold163G37988 Striga asiatica HOM05D006429 ORTHO05D008173 4.6e-07 58.2 55 56.4
ECA233G5545 Erigeron canadensis HOM05D006429 ORTHO05D008173 6.0e-07 57.8 56 57.1
Lalb_Chr24g0402221 Lupinus albus HOM05D006429 ORTHO05D008173 6.0e-07 57.8 56 53.6
FvH4_2g29360 Fragaria vesca HOM05D006429 ORTHO05D008173 7.8e-07 57.4 56 55.4
FAN15G1390 Fragaria x ananassa HOM05D006429 ORTHO05D008173 7.8e-07 57.4 56 55.4
FAN24G2390 Fragaria x ananassa HOM05D006429 ORTHO05D008173 7.8e-07 57.4 56 55.4
FAN27G0392 Fragaria x ananassa HOM05D006429 ORTHO05D008173 7.8e-07 57.4 56 55.4
HanXRQChr13g0403421 Helianthus annuus HOM05D006429 ORTHO05D008173 7.8e-07 57.4 56 55.4
AUR62032544 Chenopodium quinoa HOM05D006429 ORTHO05D008173 1.0e-06 57.0 56 58.9
Psat6g029600 Pisum sativum HOM05D006429 ORTHO05D008173 1.0e-06 57.0 56 53.6
PGSC0003DMG400020474 Solanum tuberosum HOM05D006429 ORTHO05D008173 1.0e-06 57.0 56 58.9
RcHm_v2.0_Chr6g0298181 Rosa chinensis HOM05D006429 ORTHO05D008173 1.3e-06 56.6 56 55.4
EL10Ac2g02614 Beta vulgaris HOM05D006429 ORTHO05D008173 1.7e-06 56.2 55 56.4
CANSAT01G2886 Cannabis sativa HOM05D006429 ORTHO05D008173 1.7e-06 56.2 55 56.4
arahy.Tifrunner.gnm1.ann1.DMN84V Arachis hypogaea HOM05D006429 ORTHO05D008173 2.3e-06 55.8 56 53.6
arahy.Tifrunner.gnm1.ann1.H48Z1Z Arachis hypogaea HOM05D006429 ORTHO05D008173 2.3e-06 55.8 56 53.6
VMungo0647G0488 Vigna mungo HOM05D006429 ORTHO05D008173 2.3e-06 55.8 56 53.6
Cc08_g00870 Coffea canephora HOM05D006429 ORTHO05D008173 3.0e-06 55.5 55 54.5
Lj5g0005549 Lotus japonicus HOM05D006429 ORTHO05D008173 3.0e-06 55.5 56 53.6
Phvul.001G051900 Phaseolus vulgaris HOM05D006429 ORTHO05D008173 3.0e-06 55.5 56 51.8
Zm00001eb064690 Zea mays HOM05D006429 ORTHO05D008173 3.0e-06 55.5 55 52.7
Actinidia15677 Actinidia chinensis HOM05D006429 ORTHO05D008173 5.1e-06 54.7 56 53.6
ATR0322G019 Amborella trichopoda HOM05D006429 ORTHO05D008173 5.1e-06 54.7 55 56.4
Solyc06g066090.3 Solanum lycopersicum HOM05D006429 ORTHO05D008173 5.1e-06 54.7 56 57.1
Sopen06g024570 Solanum pennellii HOM05D006429 ORTHO05D008173 5.1e-06 54.7 56 57.1
BcaB08g35187 Brassica carinata HOM05D006429 ORTHO05D008173 8.6e-06 53.9 56 53.6


User provided reference genes

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