Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 0.0e+00 1382.9 796 100.0
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 1.7e-199 700.3 800 60.2
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 7.3e-190 668.3 792 57.6
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 1.2e-168 597.8 792 54.8
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.3e-157 561.2 780 53.2
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 1.4e-156 557.8 801 52.7
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 4.9e-154 549.3 787 50.7
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 3.2e-153 546.6 793 50.3
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 9.3e-153 545.0 750 52.8
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 2.1e-152 543.9 773 49.7
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 3.5e-152 543.1 782 51.2
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.5e-152 543.1 793 50.8
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 1.3e-149 534.6 682 55.7
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 8.1e-149 531.9 747 50.6
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 1.1e-148 531.6 782 50.3
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 5.3e-148 529.3 728 51.9
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 6.9e-148 528.9 782 50.1
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 1.7e-146 524.2 746 51.5
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 6.4e-146 522.3 898 45.9
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 1.6e-144 517.7 738 52.0
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 2.1e-144 517.3 749 51.4
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 7.9e-144 515.4 794 50.4
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 6.7e-143 512.3 734 52.2
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 2.4e-140 503.8 832 39.2
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 5.7e-134 482.6 634 43.7
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 7.4e-134 482.3 845 46.3
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 4.8e-133 479.6 874 45.4
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 1.4e-132 478.0 781 47.1
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 1.2e-131 474.9 702 42.7
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 2.2e-130 470.7 675 42.4
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 2.9e-130 470.3 640 53.4
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 2.7e-128 463.8 799 46.9
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 2.7e-128 463.8 642 44.1
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 1.1e-126 458.4 796 47.5
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 1.3e-125 454.9 629 42.6
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 1.7e-125 454.5 794 46.9
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 1.1e-124 451.8 638 42.2
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 1.4e-124 451.4 807 44.7
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 2.4e-124 450.7 684 41.8
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 2.4e-124 450.7 633 42.8
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 1.2e-123 448.4 645 41.2
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 2.6e-123 447.2 528 47.0
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 1.3e-122 444.9 644 42.9
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 6.5e-122 442.6 803 43.6
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 4.2e-121 439.9 677 40.3
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 3.0e-119 433.7 670 40.9
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 6.7e-119 432.6 685 40.0
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 2.6e-118 430.6 639 51.5
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 3.7e-117 426.8 669 47.7
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 2.6e-115 420.6 635 40.3
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 4.5e-115 419.9 660 51.4
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 5.9e-115 419.5 722 46.8
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 5.9e-115 419.5 740 47.2
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 2.9e-114 417.2 680 38.7
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 6.1e-112 409.5 760 45.7
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 3.0e-111 407.1 693 47.8
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 3.9e-111 406.8 788 46.7
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 6.3e-109 399.4 711 47.5
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 1.8e-108 397.9 730 46.3
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 5.3e-108 396.4 708 46.8
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 5.3e-108 396.4 658 48.8
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 5.0e-106 389.8 778 42.9
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 1.5e-105 388.3 471 46.7
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 2.1e-104 384.4 714 47.1
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 2.7e-104 384.0 711 47.0
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 4.7e-104 383.3 709 46.8
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 3.0e-103 380.6 800 42.8
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 2.2e-101 374.4 648 41.4
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 2.2e-101 374.4 599 40.9
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 7.7e-99 365.9 726 43.4
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 2.2e-98 364.4 716 45.4
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 2.2e-98 364.4 718 45.5
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 1.1e-97 362.1 711 46.1
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 2.3e-95 354.4 713 45.9
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 8.8e-95 352.4 650 44.8
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 1.7e-93 348.2 714 45.7
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 3.1e-92 344.0 638 45.0
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 1.6e-91 341.7 559 51.7
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 5.9e-91 339.7 739 44.4
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 5.9e-91 339.7 637 47.3
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 3.6e-88 330.5 724 43.6
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 1.3e-85 322.0 483 40.2
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 2.2e-85 321.2 586 48.0
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 1.0e-82 312.4 709 42.3
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 1.9e-76 291.6 578 44.6
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 1.8e-71 275.0 482 36.7
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 2.3e-71 274.6 552 44.4
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 4.9e-69 266.9 715 38.0
Nitab4.5_0000944g0040 Nicotiana tabacum HOM05D006757 ORTHO05D004651 2.1e-64 251.5 234 53.8
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 1.2e-59 235.7 722 33.4
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 7.8e-51 206.5 462 47.6
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 5.1e-50 203.8 340 40.9
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 7.3e-49 199.9 345 38.8
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 2.8e-48 198.0 663 29.9
Oeu001141.1 Olea europaea HOM05D006757 ORTHO05D004651 6.9e-47 193.4 248 45.6
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 1.1e-41 176.0 515 30.9
CSS0036943 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 5.6e-41 173.7 175 50.9
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 1.4e-36 159.1 306 33.7
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 1.8e-31 142.1 473 30.2
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 2.7e-27 128.3 249 33.3
SalBow2G2121 Salvia bowleyana HOM05D006757 ORTHO05D004651 4.6e-27 127.5 170 47.1
CDE04G0645 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 1.5e-22 112.5 263 35.4
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 2.0e-22 112.1 306 32.7
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 7.6e-22 110.2 77 72.7
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 6.5e-21 107.1 243 35.8
Actinidia37474 Actinidia chinensis HOM05D006757 ORTHO05D004651 3.5e-19 101.3 161 39.8
CSS0016054 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 7.4e-17 93.6 225 37.3
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 2.0e-14 85.5 47 78.7
Ciclev10006110m.g Citrus clementina HOM05D006757 ORTHO05D004651 1.6e-11 75.9 111 42.3
Glyma.20G109150 Glycine max HOM05D006757 ORTHO05D004651 1.6e-11 75.9 81 46.9
Peaxi162Scf00097g02317 Petunia axillaris HOM05D006757 ORTHO05D004651 3.9e-10 71.2 86 47.7
Cc11_g03350 Coffea canephora HOM05D006757 ORTHO05D004651 5.1e-10 70.9 131 37.4
Hma1.2p1_0933F.1_g238390 Hydrangea macrophylla HOM05D006757 ORTHO05D034208 2.5e-09 68.6 117 40.2
Haze_10728 Corylus avellana HOM05D063416 ORTHO05D034208 1.8e-07 62.4 112 39.3
Ah.02g120100 Amaranthus hybridus HOM05D006757 ORTHO05D004651 1.2e-06 59.7 128 35.9


User provided reference genes

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