Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 1.1e-157 560.1 325 100.0
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 4.0e-86 322.4 325 58.8
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 2.0e-85 320.1 321 59.2
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 1.1e-83 314.3 339 59.9
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 1.2e-82 310.8 330 58.5
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 5.6e-80 302.0 340 62.4
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 5.6e-80 302.0 343 55.1
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 5.6e-80 302.0 334 57.8
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 5.6e-80 302.0 330 59.4
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 7.3e-80 301.6 309 58.9
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 1.6e-79 300.4 323 57.6
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 4.7e-79 298.9 331 57.1
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 6.2e-79 298.5 314 56.7
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 6.2e-79 298.5 314 58.3
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 8.1e-79 298.1 328 58.5
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 8.1e-79 298.1 328 58.2
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 2.3e-78 296.6 339 54.0
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 1.5e-77 293.9 302 56.3
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 2.6e-77 293.1 295 59.0
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 4.4e-77 292.4 338 54.1
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 1.3e-76 290.8 315 57.8
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 3.8e-76 289.3 337 54.9
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 4.9e-76 288.9 321 55.5
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 6.4e-76 288.5 290 59.0
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 1.1e-75 287.7 347 53.3
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 2.1e-74 283.5 311 56.3
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 4.6e-74 282.3 336 53.0
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 4.6e-74 282.3 316 55.4
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 4.6e-74 282.3 339 59.6
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 6.0e-74 282.0 335 54.0
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 3.0e-73 279.6 315 62.9
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 6.6e-73 278.5 315 59.0
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 8.6e-73 278.1 362 51.4
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 2.5e-72 276.6 350 56.9
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 5.6e-72 275.4 210 72.9
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 7.3e-72 275.0 332 52.7
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 9.6e-72 274.6 294 55.8
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 9.6e-72 274.6 332 53.6
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 1.2e-71 274.2 337 55.8
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 2.1e-71 273.5 324 55.9
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 3.6e-71 272.7 316 57.6
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 4.7e-71 272.3 316 56.6
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 8.1e-71 271.6 319 54.9
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 1.8e-70 270.4 342 51.2
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 3.1e-70 269.6 316 56.3
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 4.0e-70 269.2 316 53.8
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 5.2e-70 268.9 316 53.8
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 4.4e-69 265.8 334 50.9
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 7.6e-69 265.0 354 50.0
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 3.8e-68 262.7 294 59.5
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 3.8e-68 262.7 346 52.9
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 3.8e-68 262.7 316 57.0
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 6.4e-68 261.9 348 53.7
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 8.4e-68 261.5 346 52.6
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 8.4e-68 261.5 338 50.6
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 8.4e-68 261.5 336 50.3
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 2.4e-67 260.0 288 54.2
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 3.2e-67 259.6 314 52.5
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 7.1e-67 258.5 349 55.0
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 1.6e-66 257.3 328 52.4
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 2.7e-66 256.5 363 51.8
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 4.6e-66 255.8 331 52.3
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 7.8e-66 255.0 325 49.5
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 3.9e-65 252.7 321 50.8
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 5.1e-65 252.3 318 53.8
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 8.7e-65 251.5 342 48.2
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 1.1e-64 251.1 334 55.7
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 1.1e-64 251.1 292 53.8
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 1.9e-64 250.4 352 56.0
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 2.5e-64 250.0 335 55.5
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 1.6e-63 247.3 223 62.8
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 3.6e-63 246.1 334 55.1
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 8.1e-63 245.0 384 44.0
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 3.1e-62 243.0 296 57.8
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 4.0e-62 242.7 334 55.7
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 4.0e-62 242.7 334 54.8
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 1.5e-61 240.7 311 52.7
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 2.0e-61 240.4 319 50.2
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 2.0e-61 240.4 307 49.5
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 2.6e-61 240.0 341 51.0
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 2.6e-61 240.0 332 53.9
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 3.4e-61 239.6 311 49.8
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 4.5e-61 239.2 308 53.9
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 5.8e-61 238.8 307 49.8
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 5.8e-61 238.8 271 51.7
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 7.6e-61 238.4 301 53.2
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 9.9e-61 238.0 297 49.8
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 1.7e-60 237.3 309 49.8
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 1.7e-60 237.3 299 56.9
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 4.9e-60 235.7 323 46.4
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 4.9e-60 235.7 315 52.1
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 2.4e-59 233.4 314 49.4
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 7.1e-59 231.9 322 51.9
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 4.6e-58 229.2 288 55.2
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 4.6e-58 229.2 174 70.7
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 1.3e-57 227.6 310 47.7
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 2.3e-57 226.9 230 57.0
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 5.1e-57 225.7 278 54.7
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 6.7e-57 225.3 514 40.7
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 1.5e-56 224.2 359 43.5
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 2.5e-56 223.4 341 45.2
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 5.6e-56 222.2 320 50.6
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 6.2e-55 218.8 357 50.7
Nn1g02050 Nelumbo nucifera HOM05D005155 ORTHO05D006266 6.2e-55 218.8 320 47.8
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 1.8e-54 217.2 297 47.8
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 5.3e-54 215.7 316 46.8
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 4.5e-53 212.6 362 48.6
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 1.3e-52 211.1 226 56.2
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 1.7e-52 210.7 265 49.1
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 6.4e-52 208.8 330 45.5
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 3.2e-51 206.5 312 49.0
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 7.1e-51 205.3 261 51.7
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 4.6e-50 202.6 324 45.4
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 5.1e-49 199.1 297 49.8
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 2.6e-45 186.8 139 70.5
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 2.2e-44 183.7 207 53.1
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 4.9e-44 182.6 214 52.8
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 6.5e-44 182.2 268 47.4
CiPaw.03G283900 Carya illinoinensis HOM05D005155 ORTHO05D006266 1.4e-43 181.0 342 42.7
Lj1A800T38 Lonicera japonica HOM05D005155 ORTHO05D006266 6.7e-41 172.2 331 45.3
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 3.4e-37 159.8 125 68.8
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 4.5e-37 159.5 115 73.0
PSO782G5585 Papaver somniferum HOM05D005155 ORTHO05D006266 4.5e-37 159.5 291 39.9
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 3.3e-32 143.3 112 69.6
AUR62008242 Chenopodium quinoa HOM05D005155 ORTHO05D006266 3.7e-31 139.8 148 55.4
PSO782G0752 Papaver somniferum HOM05D005155 ORTHO05D006266 1.4e-30 137.9 233 46.8
QL01p014609 Quercus lobata HOM05D005155 ORTHO05D006266 4.5e-29 132.9 117 65.0
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 1.2e-26 124.8 239 42.3
Nn1g02049 Nelumbo nucifera HOM05D005155 ORTHO05D006266 1.1e-24 118.2 179 44.7
Cc07_g20180 Coffea canephora HOM05D005155 ORTHO05D006266 1.3e-20 104.8 106 56.6
Hma1.2p1_1388F.1_g279940 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 1.3e-20 104.8 68 76.5
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 2.2e-20 104.0 175 39.4
Pp3c22_320 Physcomitrium patens HOM05D005155 ORTHO05D006266 5.2e-17 92.8 182 34.6
Pp3c22_322 Physcomitrium patens HOM05D005155 ORTHO05D006266 5.2e-17 92.8 182 34.6
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 1.1e-16 91.7 186 37.1
Cc00_g29960 Coffea canephora HOM05D005155 ORTHO05D006266 4.1e-14 83.2 90 55.6
QL03p064628 Quercus lobata HOM05D005155 ORTHO05D006266 1.3e-12 78.2 336 34.2
MD17G1119400 Malus domestica HOM05D005155 ORTHO05D006266 2.9e-12 77.0 81 56.8
A02p30930 Brassica napus HOM05D005155 ORTHO05D006266 6.7e-09 65.9 66 56.1
Lj1A800T39 Lonicera japonica HOM05D005155 ORTHO05D006266 2.6e-08 63.9 51 64.7
PRCOL_00000835 Prasinoderma coloniale HOM05D005155 ORTHO05D006266 4.4e-08 63.2 159 34.0
QL03p064635 Quercus lobata HOM05D005155 ORTHO05D006266 9.7e-08 62.0 61 59.0


User provided reference genes

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