Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G04113 Aquilegia oxysepala HOM05D005922 ORTHO05D006934 1.5e-244 849.0 409 100.0
TAR622G0311 Trochodendron aralioides HOM05D005922 ORTHO05D006934 6.6e-163 577.8 396 71.2
PSO017G1338 Papaver somniferum HOM05D005922 ORTHO05D006934 1.3e-155 553.5 401 68.1
PSO478G3575 Papaver somniferum HOM05D005922 ORTHO05D006934 1.5e-154 550.1 396 67.9
Nn4g24501 Nelumbo nucifera HOM05D005922 ORTHO05D006934 5.6e-154 548.1 397 67.0
Rhsim09G0086000 Rhododendron simsii HOM05D005922 ORTHO05D006934 1.2e-143 513.8 396 64.6
Actinidia20108 Actinidia chinensis HOM05D005922 ORTHO05D006934 1.4e-141 506.9 397 63.5
Lj3A860T49 Lonicera japonica HOM05D005922 ORTHO05D006934 2.5e-141 506.1 389 65.6
CiPaw.06G059000 Carya illinoinensis HOM05D005922 ORTHO05D006934 5.5e-141 505.0 400 63.8
Manes.17G088400 Manihot esculenta HOM05D005922 ORTHO05D006934 1.8e-139 500.0 384 64.6
MD16G1013700 Malus domestica HOM05D005922 ORTHO05D006934 2.5e-138 496.1 405 63.5
QL03p038994 Quercus lobata HOM05D005922 ORTHO05D006934 2.5e-138 496.1 396 61.4
CSS0049283 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 5.7e-138 495.0 398 62.3
RcHm_v2.0_Chr4g0442081 Rosa chinensis HOM05D005922 ORTHO05D006934 1.8e-136 490.0 399 63.2
Lalb_Chr13g0293631 Lupinus albus HOM05D005922 ORTHO05D006934 2.6e-135 486.1 396 59.8
FvH4_4g33040 Fragaria vesca HOM05D005922 ORTHO05D006934 4.5e-135 485.3 395 62.3
FAN12G4156 Fragaria x ananassa HOM05D005922 ORTHO05D006934 5.9e-135 485.0 395 62.0
FAN17G1819 Fragaria x ananassa HOM05D005922 ORTHO05D006934 5.0e-134 481.9 395 62.5
FAN07G1633 Fragaria x ananassa HOM05D005922 ORTHO05D006934 6.5e-134 481.5 395 61.8
Lj4g0028223 Lotus japonicus HOM05D005922 ORTHO05D006934 1.1e-133 480.7 400 60.0
FAN22G1644 Fragaria x ananassa HOM05D005922 ORTHO05D006934 2.1e-132 476.5 402 61.7
MBI19_g25220_MAGBIO Magnolia biondii HOM05D005922 ORTHO05D006934 2.7e-132 476.1 402 61.4
PGSC0003DMG400022790 Solanum tuberosum HOM05D005922 ORTHO05D006934 3.6e-132 475.7 395 59.7
Ciclev10015473m.g Citrus clementina HOM05D005922 ORTHO05D006934 4.6e-132 475.3 404 58.4
Phvul.002G181600 Phaseolus vulgaris HOM05D005922 ORTHO05D006934 3.0e-131 472.6 400 58.0
Solyc01g005100.4 Solanum lycopersicum HOM05D005922 ORTHO05D006934 3.9e-131 472.2 400 58.2
Lsat_1_v5_gn_4_23861 Lactuca sativa HOM05D005922 ORTHO05D006934 5.1e-131 471.9 383 60.8
Thhalv10018688m.g Eutrema salsugineum HOM05D005922 ORTHO05D006934 1.1e-130 470.7 399 60.2
TWI74G0639 Tripterygium wilfordii HOM05D005922 ORTHO05D006934 1.5e-130 470.3 395 59.0
Glyma.08G093700 Glycine max HOM05D005922 ORTHO05D006934 4.3e-130 468.8 398 59.3
Sopen01g001120 Solanum pennellii HOM05D005922 ORTHO05D006934 4.3e-130 468.8 400 58.0
EL10Ac6g14554 Beta vulgaris HOM05D005922 ORTHO05D006934 7.4e-130 468.0 397 57.2
Eucgr.B02658 Eucalyptus grandis HOM05D005922 ORTHO05D006934 7.4e-130 468.0 399 58.6
ECA234G0994 Erigeron canadensis HOM05D005922 ORTHO05D006934 1.3e-129 467.2 376 61.2
arahy.Tifrunner.gnm1.ann1.DV72QU Arachis hypogaea HOM05D005922 ORTHO05D006934 3.7e-129 465.7 397 58.7
GSVIVG01011600001 Vitis vinifera HOM05D005922 ORTHO05D006934 4.8e-129 465.3 395 60.5
Cc11_g05840 Coffea canephora HOM05D005922 ORTHO05D006934 1.8e-128 463.4 396 59.3
CAN.G282.103 Capsicum annuum HOM05D005922 ORTHO05D006934 4.1e-128 462.2 401 57.4
AL2G26830 Arabidopsis lyrata HOM05D005922 ORTHO05D006934 5.3e-128 461.8 400 59.5
TPR.G5128 Trifolium pratense HOM05D005922 ORTHO05D006934 4.5e-127 458.8 398 58.0
BcaB03g15398 Brassica carinata HOM05D005922 ORTHO05D006934 7.7e-127 458.0 402 58.0
HanXRQChr17g0566161 Helianthus annuus HOM05D005922 ORTHO05D006934 2.9e-126 456.1 405 57.3
Gorai.012G183700 Gossypium raimondii HOM05D005922 ORTHO05D006934 5.0e-126 455.3 396 56.6
Psat7g084400 Pisum sativum HOM05D005922 ORTHO05D006934 5.0e-126 455.3 395 57.7
Ca_11580_v3 Cicer arietinum L. HOM05D005922 ORTHO05D006934 8.5e-126 454.5 399 56.6
AUR62002964 Chenopodium quinoa HOM05D005922 ORTHO05D006934 1.2e-124 450.7 397 54.7
BraA07t30847Z Brassica rapa HOM05D005922 ORTHO05D006934 1.6e-124 450.3 404 57.9
C06p37940 Brassica napus HOM05D005922 ORTHO05D006934 2.1e-124 449.9 401 58.1
Carub.0002s1456 Capsella rubella HOM05D005922 ORTHO05D006934 2.7e-124 449.5 401 57.6
Sc10g0003730 Simmondsia chinensis HOM05D005922 ORTHO05D006934 4.7e-124 448.7 381 58.8
MSTRG.418 Avicennia marina HOM05D005922 ORTHO05D006934 6.1e-124 448.4 391 58.1
Potri.008G139000 Populus trichocarpa HOM05D005922 ORTHO05D006934 5.1e-123 445.3 392 59.2
ATR0598G299 Amborella trichopoda HOM05D005922 ORTHO05D006934 6.7e-123 444.9 401 59.1
BcaC08g45999 Brassica carinata HOM05D005922 ORTHO05D006934 6.7e-123 444.9 402 57.0
BolC6t38893H Brassica oleracea HOM05D005922 ORTHO05D006934 6.7e-123 444.9 402 57.0
AUR62007770 Chenopodium quinoa HOM05D005922 ORTHO05D006934 8.8e-123 444.5 397 54.4
A07p32170 Brassica napus HOM05D005922 ORTHO05D006934 2.0e-122 443.4 401 57.4
Prupe.1G337400 Prunus persica HOM05D005922 ORTHO05D006934 2.6e-122 443.0 402 58.0
Sed0026869 Sechium edule HOM05D005922 ORTHO05D006934 2.8e-121 439.5 402 57.0
Migut.L00620 Erythranthe guttata HOM05D005922 ORTHO05D006934 1.1e-120 437.6 393 56.0
Hund05787 Selenicereus undatus HOM05D005922 ORTHO05D006934 1.4e-120 437.2 445 51.2
THA.LOC104809799 Tarenaya hassleriana HOM05D005922 ORTHO05D006934 5.3e-120 435.3 399 58.1
CSS0037760 Camellia sinensis var. sinensis HOM05D005922 ORTHO05D006934 3.5e-119 432.6 397 56.7
PGR102G1589 Punica granatum HOM05D005922 ORTHO05D006934 2.9e-118 429.5 417 53.5
CsaV3_5G013220 Cucumis sativus L. HOM05D005922 ORTHO05D006934 1.1e-117 427.6 399 55.6
Dinv14365 Davidia involucrata HOM05D001297 ORTHO05D001135 9.4e-117 424.5 369 59.6
Aa31LG10G3720 Aethionema arabicum HOM05D005922 ORTHO05D006934 2.1e-116 423.3 380 58.2
Gohir.D04G188200 Gossypium hirsutum HOM05D005922 ORTHO05D006934 2.1e-116 423.3 323 63.2
MELO3C020028.2 Cucumis melo HOM05D005922 ORTHO05D006934 1.8e-115 420.2 400 55.0
Duzib248G0719 Durio zibethinus HOM05D005922 ORTHO05D006934 3.9e-115 419.1 394 54.3
Sp5g23080 Schrenkiella parvula HOM05D005922 ORTHO05D006934 6.7e-115 418.3 352 61.6
DCAR_026820 Daucus carota HOM05D005922 ORTHO05D006934 4.8e-113 412.1 372 57.3
Gohir.A04G143900 Gossypium hirsutum HOM05D005922 ORTHO05D006934 8.2e-113 411.4 369 56.4
unitig_748.g7591 Utricularia gibba HOM05D005922 ORTHO05D006934 8.2e-113 411.4 392 53.8
SGA_v2.0_scaffold57G20105 Striga asiatica HOM05D005922 ORTHO05D006934 1.6e-111 407.1 403 54.6
Nitab4.5_0000521g0110 Nicotiana tabacum HOM05D005922 ORTHO05D006934 2.0e-111 406.8 447 49.7
ClCG11G001170 Citrullus lanatus HOM05D005922 ORTHO05D006934 2.6e-111 406.4 402 54.5
Sabra08G0105600 Salix brachista HOM05D005922 ORTHO05D006934 7.7e-111 404.8 421 52.0
CDE05G0039 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 3.7e-105 386.0 396 51.5
SHI04278 Sapria himalayana HOM05D005922 ORTHO05D006934 5.3e-104 382.1 401 51.1
CANSAT78G1412 Cannabis sativa HOM05D005922 ORTHO05D006934 2.9e-102 376.3 401 49.6
Nitab4.5_0001935g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 5.5e-101 372.1 415 48.7
Os03g0238700 Oryza sativa ssp. japonica HOM05D005922 ORTHO05D006934 5.9e-95 352.1 291 57.4
Cpa.g.sc2.132 Carica papaya HOM05D005922 ORTHO05D006934 5.2e-91 339.0 331 52.0
Glyma.05G138500 Glycine max HOM05D005922 ORTHO05D006934 9.8e-90 334.7 292 58.6
Haze_10819 Corylus avellana HOM05D005922 ORTHO05D006934 3.7e-89 332.8 239 69.0
BcaC08g45997 Brassica carinata HOM05D005922 ORTHO05D006934 1.4e-88 330.9 322 53.1
COL.COLO4_27589 Corchorus olitorius HOM05D005922 ORTHO05D006934 5.4e-88 328.9 330 52.4
Ah.03g138110 Amaranthus hybridus HOM05D005922 ORTHO05D006934 7.8e-87 325.1 395 44.6
Cfa015069 Carpinus fangiana HOM05D005922 ORTHO05D006934 7.3e-85 318.5 398 44.5
SalBow7G4797 Salvia bowleyana HOM05D005922 ORTHO05D006934 2.3e-83 313.5 417 44.6
AT1G68080 Arabidopsis thaliana HOM05D005922 ORTHO05D006934 1.2e-82 311.2 342 50.9
Atru.chr11.736 Acer truncatum HOM05D005922 ORTHO05D006934 9.2e-80 301.6 392 43.1
Pp3c27_7680 Physcomitrium patens HOM05D005922 ORTHO05D006934 9.2e-80 301.6 445 40.0
arahy.Tifrunner.gnm1.ann1.F0VD4J Arachis hypogaea HOM05D005922 ORTHO05D006934 8.0e-76 288.5 288 52.8
AagrBONN_evm.TU.Sc2ySwM_117.2043 Anthoceros agrestis HOM05D005922 ORTHO05D006934 2.3e-75 287.0 311 49.5
Nitab4.5_0001294g0040 Nicotiana tabacum HOM05D005922 ORTHO05D006934 1.2e-66 258.1 166 71.1
CARHR060740 Cardamine hirsuta HOM05D005922 ORTHO05D006934 2.1e-63 247.3 283 49.5
arahy.Tifrunner.gnm1.ann1.05ZMZX Arachis hypogaea HOM05D005922 ORTHO05D006934 1.3e-57 228.0 142 73.2
HPP92_016714 Vanilla planifolia HOM05D005922 ORTHO05D006934 1.4e-56 224.6 292 42.8
Peaxi162Scf01111g00310 Petunia axillaris HOM05D005922 ORTHO05D006934 3.2e-56 223.4 298 43.3
SEGI_26303 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 1.9e-53 214.2 127 75.6
Thecc.02G304700 Theobroma cacao HOM05D005922 ORTHO05D006934 3.3e-53 213.4 277 44.0
Mapoly0075s0019 Marchantia polymorpha HOM05D005922 ORTHO05D006934 1.3e-52 211.5 274 44.5
arahy.Tifrunner.gnm1.ann1.GW2J4P Arachis hypogaea HOM05D006503 ORTHO05D008116 1.1e-51 208.4 250 46.8
Oeu034664.1 Olea europaea HOM05D005922 ORTHO05D006934 1.7e-49 201.1 113 82.3
Nitab4.5_0001294g0050 Nicotiana tabacum HOM05D005922 ORTHO05D006934 6.4e-49 199.1 150 63.3
Migut.O00731 Erythranthe guttata HOM05D005922 ORTHO05D006934 2.4e-48 197.2 257 43.6
VMungo0251G2725 Vigna mungo HOM05D005922 ORTHO05D006934 2.7e-47 193.7 240 45.0
CBR_g16882 Chara braunii HOM05D005922 ORTHO05D006934 9.6e-45 185.3 118 66.1
BcaB05g23450 Brassica carinata HOM05D005922 ORTHO05D006934 2.1e-44 184.1 112 73.2
VMungo0251G3333 Vigna mungo HOM05D005922 ORTHO05D006934 1.8e-43 181.0 102 76.5
Cre12.g486551 Chlamydomonas reinhardtii HOM05D005922 ORTHO05D006934 4.9e-41 172.9 184 46.7
arahy.Tifrunner.gnm1.ann1.P482X0 Arachis hypogaea HOM05D005922 ORTHO05D006934 9.6e-37 158.7 96 76.0
Manes.18G025338 Manihot esculenta HOM05D005922 ORTHO05D006934 2.4e-35 154.1 85 83.5
Oeu031680.1 Olea europaea HOM05D005922 ORTHO05D006934 8.7e-30 135.6 140 52.9
BcaB02g11286 Brassica carinata HOM05D005922 ORTHO05D006934 1.4e-27 128.3 112 57.1
Zm00001eb399130 Zea mays HOM05D005922 ORTHO05D006934 4.5e-26 123.2 86 60.5
PRCOL_00005504 Prasinoderma coloniale HOM05D005922 ORTHO05D006934 1.4e-24 118.2 223 35.9
arahy.Tifrunner.gnm1.ann1.62WV2A Arachis hypogaea HOM05D005922 ORTHO05D006934 5.1e-22 109.8 102 52.0
arahy.Tifrunner.gnm1.ann1.QG6U7W Arachis hypogaea HOM05D005922 ORTHO05D006934 5.1e-22 109.8 102 52.0
arahy.Tifrunner.gnm1.ann1.B3UXS8 Arachis hypogaea HOM05D005922 ORTHO05D006934 8.7e-22 109.0 69 72.5
arahy.Tifrunner.gnm1.ann1.39MP9Z Arachis hypogaea HOM05D002181 ORTHO05D003287 2.2e-17 94.4 60 66.7
arahy.Tifrunner.gnm1.ann1.XTWJ7M Arachis hypogaea HOM05D002181 ORTHO05D006934 6.5e-17 92.8 57 70.2
Haze_10820 Corylus avellana HOM05D005922 ORTHO05D006934 1.1e-16 92.0 93 53.8
arahy.Tifrunner.gnm1.ann1.043Q1E Arachis hypogaea HOM05D005922 ORTHO05D006934 2.7e-15 87.4 49 75.5
CDE11G0599 Ceratophyllum demersum HOM05D005922 ORTHO05D006934 2.7e-15 87.4 90 46.7
arahy.Tifrunner.gnm1.ann1.10JCRR Arachis hypogaea HOM05D000690 ORTHO05D006934 1.4e-14 85.1 50 72.0
arahy.Tifrunner.gnm1.ann1.QNE0FJ Arachis hypogaea HOM05D002181 ORTHO05D003287 1.4e-14 85.1 49 71.4
SEGI_24854 Sequoiadendron giganteum HOM05D005922 ORTHO05D006934 1.5e-13 81.6 227 28.6
Manes.17G089020 Manihot esculenta HOM05D005922 ORTHO05D006934 7.7e-10 69.3 74 52.7
Zm00001eb371330 Zea mays HOM05D005922 ORTHO05D006934 5.1e-06 56.6 41 53.7


User provided reference genes

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