Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G04047 Aquilegia oxysepala HOM05D007187 ORTHO05D009219 1.8e-196 689.1 366 100.0
TAR629G1287 Trochodendron aralioides HOM05D007187 ORTHO05D009219 3.6e-128 462.2 347 72.0
Nn4g24583 Nelumbo nucifera HOM05D007187 ORTHO05D009219 6.6e-122 441.4 349 68.8
GSVIVG01000394001 Vitis vinifera HOM05D007187 ORTHO05D009219 7.6e-118 427.9 337 70.0
PSO063G6433 Papaver somniferum HOM05D007187 ORTHO05D009219 1.9e-116 423.3 351 67.8
Atru.chr9.1590 Acer truncatum HOM05D007187 ORTHO05D009219 5.1e-114 415.2 363 62.3
Ciclev10020853m.g Citrus clementina HOM05D007187 ORTHO05D009219 1.9e-113 413.3 338 66.3
PSO782G3824 Papaver somniferum HOM05D007187 ORTHO05D009219 1.9e-113 413.3 354 65.8
Hma1.2p1_0471F.1_g159290 Hydrangea macrophylla HOM05D007187 ORTHO05D009219 3.3e-113 412.5 287 73.9
RcHm_v2.0_Chr7g0177701 Rosa chinensis HOM05D007187 ORTHO05D009219 3.7e-112 409.1 347 63.7
MD06G1234700 Malus domestica HOM05D007187 ORTHO05D009219 2.4e-111 406.4 332 65.7
Cfa020663 Carpinus fangiana HOM05D007187 ORTHO05D009219 3.4e-110 402.5 348 65.8
FAN13G0144 Fragaria x ananassa HOM05D007187 ORTHO05D009219 2.2e-109 399.8 347 62.2
Manes.14G173900 Manihot esculenta HOM05D007187 ORTHO05D009219 1.2e-107 394.0 339 63.4
Thecc.03G067300 Theobroma cacao HOM05D007187 ORTHO05D009219 2.7e-107 392.9 323 65.6
QL10p033296 Quercus lobata HOM05D007187 ORTHO05D009219 7.9e-107 391.3 346 62.4
QL93p0156_0017 Quercus lobata HOM05D007187 ORTHO05D009219 7.9e-107 391.3 346 62.4
Actinidia34651 Actinidia chinensis HOM05D007187 ORTHO05D009219 1.0e-106 391.0 343 62.7
Rhsim08G0113600 Rhododendron simsii HOM05D007187 ORTHO05D009219 1.3e-106 390.6 348 62.4
PGR083G1346 Punica granatum HOM05D007187 ORTHO05D009219 1.1e-105 387.5 352 62.2
ClCG04G010390 Citrullus lanatus HOM05D007187 ORTHO05D009219 4.3e-105 385.6 328 63.4
Eucgr.H00587 Eucalyptus grandis HOM05D007187 ORTHO05D009219 4.3e-105 385.6 304 67.4
Sed0020940 Sechium edule HOM05D007187 ORTHO05D009219 4.3e-105 385.6 312 65.4
Sabra15G0027300 Salix brachista HOM05D007187 ORTHO05D009219 1.3e-104 384.0 350 61.7
Gorai.001G069400 Gossypium raimondii HOM05D007187 ORTHO05D009219 1.6e-104 383.6 336 60.7
CAN.G637.26 Capsicum annuum HOM05D007187 ORTHO05D009219 2.1e-104 383.3 296 69.3
Gohir.D07G065800 Gossypium hirsutum HOM05D007187 ORTHO05D009219 2.1e-104 383.3 344 59.9
Cc04_g09730 Coffea canephora HOM05D007187 ORTHO05D009219 4.8e-104 382.1 289 68.5
Gohir.A07G061100 Gossypium hirsutum HOM05D007187 ORTHO05D009219 6.3e-104 381.7 343 59.8
Peaxi162Scf00171g00732 Petunia axillaris HOM05D007187 ORTHO05D009219 8.2e-104 381.3 288 69.8
Dinv19316 Davidia involucrata HOM05D007187 ORTHO05D009219 9.0e-103 377.9 323 65.3
AT1G73470 Arabidopsis thaliana HOM05D007187 ORTHO05D009219 3.4e-102 375.9 320 61.2
Nitab4.5_0000936g0080 Nicotiana tabacum HOM05D007187 ORTHO05D009219 3.4e-102 375.9 282 70.9
ATR0598G346 Amborella trichopoda HOM05D007187 ORTHO05D009219 7.6e-102 374.8 342 62.0
CsaV3_1G007400 Cucumis sativus L. HOM05D007187 ORTHO05D009219 7.6e-102 374.8 328 62.8
Solyc03g098110.4 Solanum lycopersicum HOM05D007187 ORTHO05D009219 1.3e-101 374.0 296 68.2
Carub.0002s2020 Capsella rubella HOM05D007187 ORTHO05D009219 1.7e-101 373.6 336 58.9
Sopen03g028810 Solanum pennellii HOM05D007187 ORTHO05D009219 1.7e-101 373.6 296 67.9
MELO3C002156.2 Cucumis melo HOM05D007187 ORTHO05D009219 2.2e-101 373.2 348 60.6
DCAR_014735 Daucus carota HOM05D007187 ORTHO05D009219 5.0e-101 372.1 306 62.7
PGSC0003DMG400031050 Solanum tuberosum HOM05D007187 ORTHO05D009219 5.0e-101 372.1 296 67.9
Nitab4.5_0004454g0040 Nicotiana tabacum HOM05D007187 ORTHO05D009219 8.5e-101 371.3 280 70.7
ECA238G2937 Erigeron canadensis HOM05D007187 ORTHO05D009219 1.1e-100 370.9 347 58.5
Prupe.5G239500 Prunus persica HOM05D007187 ORTHO05D009219 1.4e-100 370.5 347 60.2
AL2G33240 Arabidopsis lyrata HOM05D007187 ORTHO05D009219 2.5e-100 369.8 334 59.3
Lj5C164T17 Lonicera japonica HOM05D007187 ORTHO05D009219 4.2e-100 369.0 309 63.1
HPP92_026739 Vanilla planifolia HOM05D007187 ORTHO05D009219 9.3e-100 367.9 294 66.0
HanXRQChr01g0002671 Helianthus annuus HOM05D007187 ORTHO05D009219 1.2e-99 367.5 337 60.5
Thhalv10018766m.g Eutrema salsugineum HOM05D007187 ORTHO05D009219 1.6e-99 367.1 345 58.0
HPP92_016177 Vanilla planifolia HOM05D007187 ORTHO05D009219 1.6e-99 367.1 294 65.6
BolC2t09155H Brassica oleracea HOM05D007187 ORTHO05D009219 2.1e-99 366.7 328 59.5
A02p18740 Brassica napus HOM05D007187 ORTHO05D009219 3.6e-99 365.9 323 60.1
C02p31110 Brassica napus HOM05D007187 ORTHO05D009219 6.1e-99 365.2 322 60.2
Aa31LG4G3710 Aethionema arabicum HOM05D007187 ORTHO05D009219 7.9e-99 364.8 320 61.6
Lsat_1_v5_gn_2_15080 Lactuca sativa HOM05D007187 ORTHO05D009219 5.1e-98 362.1 287 65.5
MSTRG.11527 Avicennia marina HOM05D007187 ORTHO05D009219 2.5e-97 359.8 350 60.6
Migut.O00232 Erythranthe guttata HOM05D007187 ORTHO05D009219 2.5e-97 359.8 304 63.8
Sp5g28650 Schrenkiella parvula HOM05D007187 ORTHO05D009219 4.3e-97 359.0 352 56.8
TWI15G0155 Tripterygium wilfordii HOM05D007187 ORTHO05D009219 6.3e-96 355.1 373 55.5
Nitab4.5_0000021g0400 Nicotiana tabacum HOM05D007187 ORTHO05D009219 4.1e-95 352.4 337 61.7
arahy.Tifrunner.gnm1.ann1.ZBK6XN Arachis hypogaea HOM05D007187 ORTHO05D009219 5.3e-95 352.1 289 64.7
FvH4_5g17910 Fragaria vesca HOM05D007187 ORTHO05D009219 9.0e-95 351.3 317 60.9
arahy.Tifrunner.gnm1.ann1.RE1P9T Arachis hypogaea HOM05D007187 ORTHO05D009219 2.0e-94 350.1 288 64.6
SalBow5G2942 Salvia bowleyana HOM05D007187 ORTHO05D009219 5.0e-93 345.5 303 59.7
BraA02t06916Z Brassica rapa HOM05D007187 ORTHO05D009219 1.1e-92 344.4 319 57.7
CiPaw.15G149500 Carya illinoinensis HOM05D007187 ORTHO05D009219 3.2e-92 342.8 315 62.9
LjContig00484g0006565 Lotus japonicus HOM05D007187 ORTHO05D009219 1.4e-87 327.4 311 57.9
VMungo0251G3256 Vigna mungo HOM05D007187 ORTHO05D009219 2.4e-87 326.6 285 60.4
Hma1.2p1_0471F.1_g159280 Hydrangea macrophylla HOM05D007187 ORTHO05D009219 1.2e-86 324.3 234 71.8
TPR.G1397 Trifolium pratense HOM05D007187 ORTHO05D009219 1.5e-86 323.9 315 55.6
Phvul.002G332600 Phaseolus vulgaris HOM05D007187 ORTHO05D009219 2.6e-86 323.2 287 60.6
MD14G1241900 Malus domestica HOM05D007187 ORTHO05D009219 3.4e-86 322.8 336 56.2
SGA_v2.0_scaffold90G27781 Striga asiatica HOM05D007187 ORTHO05D009219 2.8e-80 303.1 353 52.4
vmacro17853 Vaccinium macrocarpon HOM05D007187 ORTHO05D009219 1.5e-73 280.8 345 51.6
Lalb_Chr16g0386871 Lupinus albus HOM05D007187 ORTHO05D009219 7.5e-73 278.5 338 50.6
Glyma.08G057000 Glycine max HOM05D007187 ORTHO05D009219 2.2e-72 276.9 260 56.9
Hund22370 Selenicereus undatus HOM05D007187 ORTHO05D009219 4.1e-71 272.7 328 52.4
Ca_17169_v3 Cicer arietinum L. HOM05D005071 ORTHO05D006069 9.1e-71 271.6 269 54.6
Sc10g0008990 Simmondsia chinensis HOM05D007187 ORTHO05D009219 5.9e-70 268.9 273 54.6
Potri.015G033200 Populus trichocarpa HOM05D007187 ORTHO05D009219 1.0e-69 268.1 275 56.0
AagrBONN_evm.TU.Sc2ySwM_228.159 Anthoceros agrestis HOM05D007187 ORTHO05D009219 2.5e-68 263.5 293 50.5
SEGI_30595 Sequoiadendron giganteum HOM05D007187 ORTHO05D009219 3.2e-68 263.1 286 53.5
Haze_18954 Corylus avellana HOM05D007187 ORTHO05D009219 2.1e-67 260.4 376 46.5
Pp3c24_15180 Physcomitrium patens HOM05D007187 ORTHO05D009219 1.4e-66 257.7 294 48.6
EL10Ac8g19490 Beta vulgaris HOM05D007187 ORTHO05D009219 1.2e-65 254.6 374 45.7
SMO137G0317 Selaginella moellendorffii HOM05D007187 ORTHO05D009219 3.1e-63 246.5 300 49.0
Mapoly0047s0078 Marchantia polymorpha HOM05D007187 ORTHO05D009219 4.2e-60 236.1 287 48.8
CBR_g23710 Chara braunii HOM05D000019 ORTHO05D000002 3.7e-56 223.0 324 43.2
FAN18G0372 Fragaria x ananassa HOM05D007187 ORTHO05D009219 8.3e-56 221.9 184 64.1
FAN08G2087 Fragaria x ananassa HOM05D007187 ORTHO05D009219 2.0e-54 217.2 188 63.3
Psat7g000640 Pisum sativum HOM05D007187 ORTHO05D009219 4.5e-54 216.1 214 53.3
SMO134G0127 Selaginella moellendorffii HOM05D007187 ORTHO05D009219 1.0e-50 204.9 243 49.0
Cpa.g.sc7.111 Carica papaya HOM05D007187 ORTHO05D009219 3.0e-50 203.4 166 63.9
Zm00001eb314540 Zea mays HOM05D007187 ORTHO05D009219 1.5e-49 201.1 233 48.5
CARHR066500 Cardamine hirsuta HOM05D007187 ORTHO05D009219 4.1e-47 193.0 145 64.8
FAN08G0101 Fragaria x ananassa HOM05D007187 ORTHO05D009219 1.4e-42 177.9 234 47.0
Os09g0448900 Oryza sativa ssp. japonica HOM05D007187 ORTHO05D009219 2.2e-40 170.6 146 65.1
Aqoxy3G04293 Aquilegia oxysepala HOM05D007187 ORTHO05D009219 3.6e-35 153.3 110 80.9
Ah.14g085920 Amaranthus hybridus HOM05D005606 ORTHO05D001302 2.2e-32 144.1 281 40.2
CDE11G1050 Ceratophyllum demersum HOM05D007187 ORTHO05D009219 4.1e-31 139.8 165 50.3
MSTRG.10865 Avicennia marina HOM05D007187 ORTHO05D009219 1.1e-26 125.2 97 68.0
Aqoxy3G04295 Aquilegia oxysepala HOM05D007187 ORTHO05D009219 4.0e-26 123.2 92 77.2
MSTRG.10866 Avicennia marina HOM05D007187 ORTHO05D009219 4.0e-26 123.2 103 66.0
Cre09.g407450 Chlamydomonas reinhardtii HOM05D007187 ORTHO05D009219 3.1e-18 97.1 406 26.4
Cpa.g.sc7.112 Carica papaya HOM05D007187 ORTHO05D009219 1.7e-16 91.3 96 51.0
Oeu023635.1 Olea europaea HOM05D004257 ORTHO05D005202 5.1e-13 79.7 108 44.4
PRCOL_00002241 Prasinoderma coloniale HOM05D007187 ORTHO05D009219 1.5e-09 68.2 109 40.4
RcHm_v2.0_Chr6g0283931 Rosa chinensis HOM05D007187 ORTHO05D009219 5.8e-09 66.2 65 52.3


User provided reference genes

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