Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03930 Aquilegia oxysepala HOM05D000040 ORTHO05D078835 2.4e-69 265.4 136 100.0
CARHR025950 Cardamine hirsuta HOM05D000040 ORTHO05D000759 6.3e-09 64.7 176 34.1
AL1G39790 Arabidopsis lyrata HOM05D000040 ORTHO05D000759 8.2e-09 64.3 176 33.0
AT1G25510 Arabidopsis thaliana HOM05D000040 ORTHO05D000759 1.1e-08 63.9 176 33.0
Nn4g23769 Nelumbo nucifera HOM05D000040 ORTHO05D000759 1.1e-08 63.9 178 33.1
Aqoxy3G00347 Aquilegia oxysepala HOM05D000040 ORTHO05D000759 1.8e-08 63.2 177 31.6
Carub.0001s2497 Capsella rubella HOM05D000040 ORTHO05D000759 1.8e-08 63.2 176 33.0
Manes.06G071000 Manihot esculenta HOM05D000040 ORTHO05D000759 1.8e-08 63.2 179 30.2
Sabra10G0097400 Salix brachista HOM05D000040 ORTHO05D000759 1.8e-08 63.2 176 30.7
HanXRQChr16g0529601 Helianthus annuus HOM05D000040 ORTHO05D000759 2.4e-08 62.8 181 32.0
PGR044G2626 Punica granatum HOM05D000040 ORTHO05D000759 2.4e-08 62.8 181 30.9
Potri.010G128200 Populus trichocarpa HOM05D000040 ORTHO05D000759 3.1e-08 62.4 176 30.1
PSO478G2401 Papaver somniferum HOM05D000040 ORTHO05D000759 5.3e-08 61.6 158 36.1
Sabra08G0089500 Salix brachista HOM05D000040 ORTHO05D000759 5.3e-08 61.6 179 29.6
PSO017G6299 Papaver somniferum HOM05D000040 ORTHO05D000759 7.0e-08 61.2 156 35.9
TWI79G1776 Tripterygium wilfordii HOM05D000040 ORTHO05D000759 7.0e-08 61.2 114 39.5
TAR371G0802 Trochodendron aralioides HOM05D000040 ORTHO05D000759 9.1e-08 60.8 178 30.9
Lsat_1_v5_gn_4_18921 Lactuca sativa HOM05D000040 ORTHO05D000759 1.2e-07 60.5 180 31.7
THA.LOC104804868 Tarenaya hassleriana HOM05D000040 ORTHO05D000759 1.5e-07 60.1 176 31.2
Thhalv10009899m.g Eutrema salsugineum HOM05D000040 ORTHO05D000759 2.0e-07 59.7 176 31.2
Cc00_g17490 Coffea canephora HOM05D000040 ORTHO05D000759 2.6e-07 59.3 177 31.6
ECA246G0935 Erigeron canadensis HOM05D000040 ORTHO05D000759 5.9e-07 58.2 114 39.5
Gohir.A12G169400 Gossypium hirsutum HOM05D000040 ORTHO05D000759 5.9e-07 58.2 170 31.2
MBI09_g40550_MAGBIO Magnolia biondii HOM05D000040 ORTHO05D000759 5.9e-07 58.2 180 31.1
PSO384G0741 Papaver somniferum HOM05D000040 ORTHO05D000759 5.9e-07 58.2 111 39.6
Sopen03g038520 Solanum pennellii HOM05D000040 ORTHO05D000759 5.9e-07 58.2 172 31.4
TAR573G0001 Trochodendron aralioides HOM05D000040 ORTHO05D000759 5.9e-07 58.2 155 33.5
COL.COLO4_07884 Corchorus olitorius HOM05D000040 ORTHO05D000759 7.7e-07 57.8 167 32.3
Solyc03g119690.3 Solanum lycopersicum HOM05D000040 ORTHO05D000759 7.7e-07 57.8 172 31.4
MSTRG.7681 Avicennia marina HOM05D000040 ORTHO05D000759 1.0e-06 57.4 179 31.3
BcaC01g01715 Brassica carinata HOM05D000040 ORTHO05D000759 1.0e-06 57.4 173 31.2
BolC3t19585H Brassica oleracea HOM05D000040 ORTHO05D000759 1.0e-06 57.4 173 31.2
Migut.L01089 Erythranthe guttata HOM05D000040 ORTHO05D000759 1.0e-06 57.4 180 30.0
PSO339G5798 Papaver somniferum HOM05D000040 ORTHO05D000759 1.0e-06 57.4 178 30.3
HanXRQChr10g0292011 Helianthus annuus HOM05D000040 ORTHO05D000759 1.3e-06 57.0 166 29.5
Haze_17452 Corylus avellana HOM05D000040 ORTHO05D000759 1.7e-06 56.6 175 30.3
Lalb_Chr14g0371291 Lupinus albus HOM05D000040 ORTHO05D000759 2.2e-06 56.2 173 32.4
Nitab4.5_0001599g0090 Nicotiana tabacum HOM05D000040 ORTHO05D000759 2.2e-06 56.2 111 38.7
Nitab4.5_0010565g0030 Nicotiana tabacum HOM05D000040 ORTHO05D000759 2.2e-06 56.2 111 38.7
CsaV3_1G006520 Cucumis sativus L. HOM05D000040 ORTHO05D000759 2.9e-06 55.8 172 30.2
Psat1g039280 Pisum sativum HOM05D000040 ORTHO05D000759 2.9e-06 55.8 110 38.2
Sabra04G0076000 Salix brachista HOM05D000040 ORTHO05D000759 2.9e-06 55.8 92 37.0
Sp1g22700 Schrenkiella parvula HOM05D000040 ORTHO05D000759 2.9e-06 55.8 176 31.8
PGSC0003DMG400005628 Solanum tuberosum HOM05D000040 ORTHO05D000759 2.9e-06 55.8 172 31.4
BcaC06g35195 Brassica carinata HOM05D000040 ORTHO05D000759 3.8e-06 55.5 176 31.8
C07p18780 Brassica napus HOM05D000040 ORTHO05D000759 3.8e-06 55.5 176 31.8
BolC7t42386H Brassica oleracea HOM05D000040 ORTHO05D000759 3.8e-06 55.5 176 31.8
CSS0008411 Camellia sinensis var. sinensis HOM05D000040 ORTHO05D000759 3.8e-06 55.5 111 38.7
CSS0029395 Camellia sinensis var. sinensis HOM05D000040 ORTHO05D000759 3.8e-06 55.5 111 38.7
Cfa018617 Carpinus fangiana HOM05D000040 ORTHO05D000759 3.8e-06 55.5 174 29.3
MELO3C002079.2 Cucumis melo HOM05D000040 ORTHO05D000759 3.8e-06 55.5 172 30.2
Gohir.D12G172700 Gossypium hirsutum HOM05D000040 ORTHO05D000759 3.8e-06 55.5 170 31.2
Gorai.008G185200 Gossypium raimondii HOM05D000040 ORTHO05D000759 3.8e-06 55.5 170 31.2
QL01p044604 Quercus lobata HOM05D000040 ORTHO05D000759 3.8e-06 55.5 180 29.4
Ca_25511_v3 Cicer arietinum L. HOM05D000040 ORTHO05D000759 5.0e-06 55.1 176 29.0
BraA08t34648Z Brassica rapa HOM05D000040 ORTHO05D000759 6.5e-06 54.7 173 30.6
Lj3C1018T14 Lonicera japonica HOM05D000040 ORTHO05D000759 6.5e-06 54.7 180 28.3
SEGI_13311 Sequoiadendron giganteum HOM05D000040 ORTHO05D000759 6.5e-06 54.7 174 28.7
Thecc.02G359200 Theobroma cacao HOM05D000040 ORTHO05D000759 6.5e-06 54.7 176 30.1
FAN04G1363 Fragaria x ananassa HOM05D000040 ORTHO05D000759 8.5e-06 54.3 178 29.8
MD14G1223700 Malus domestica HOM05D000040 ORTHO05D000759 8.5e-06 54.3 178 30.3
TPR.G8999 Trifolium pratense HOM05D000040 ORTHO05D000759 8.5e-06 54.3 112 36.6


User provided reference genes

Program Settings