Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03920 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 3.1e-268 927.9 483 100.0
TAR374G1737 Trochodendron aralioides HOM05D007356 ORTHO05D009247 2.2e-133 479.9 494 56.7
Nn4g23745 Nelumbo nucifera HOM05D007356 ORTHO05D009247 1.6e-123 447.2 492 54.5
PSO063G7355 Papaver somniferum HOM05D007356 ORTHO05D009247 2.3e-122 443.4 506 52.4
Prupe.3G239800 Prunus persica HOM05D007356 ORTHO05D009247 7.7e-102 375.2 489 48.7
Haze_14128 Corylus avellana HOM05D007356 ORTHO05D009247 1.6e-99 367.5 485 47.4
Hma1.2p1_0136F.1_g062070 Hydrangea macrophylla HOM05D007356 ORTHO05D009247 2.1e-99 367.1 495 47.7
Potri.017G112500 Populus trichocarpa HOM05D007356 ORTHO05D009247 8.0e-99 365.2 484 45.7
PSO782G4491 Papaver somniferum HOM05D007356 ORTHO05D009247 6.8e-98 362.1 429 53.1
QL02p052579 Quercus lobata HOM05D007356 ORTHO05D009247 3.7e-96 356.3 563 41.9
Dinv34849 Davidia involucrata HOM05D007356 ORTHO05D009247 4.8e-96 355.9 442 50.2
Atru.chr8.830 Acer truncatum HOM05D007356 ORTHO05D009247 8.3e-96 355.1 487 44.6
MBI16_g25107_MAGBIO Magnolia biondii HOM05D007356 ORTHO05D009247 8.3e-96 355.1 500 46.0
Cfa007946 Carpinus fangiana HOM05D007356 ORTHO05D009247 1.4e-95 354.4 480 45.6
CsaV3_3G020350 Cucumis sativus L. HOM05D007356 ORTHO05D009247 3.1e-95 353.2 494 44.9
CANSAT64G1351 Cannabis sativa HOM05D007356 ORTHO05D009247 4.5e-94 349.4 493 44.4
Thecc.04G137600 Theobroma cacao HOM05D007356 ORTHO05D009247 3.3e-92 343.2 487 45.8
Manes.01G108100 Manihot esculenta HOM05D007356 ORTHO05D009247 9.5e-92 341.7 488 45.5
MD09G1084700 Malus domestica HOM05D007356 ORTHO05D009247 2.1e-91 340.5 488 47.1
ClCG05G012060 Citrullus lanatus HOM05D007356 ORTHO05D009247 3.6e-91 339.7 487 43.7
Rhsim10G0063400 Rhododendron simsii HOM05D007356 ORTHO05D009247 4.7e-91 339.3 481 45.7
Lsat_1_v5_gn_4_153101 Lactuca sativa HOM05D007356 ORTHO05D009247 8.3e-88 328.6 490 46.1
Duzib133G0592 Durio zibethinus HOM05D007356 ORTHO05D009247 1.8e-87 327.4 492 43.9
Ciclev10011716m.g Citrus clementina HOM05D007356 ORTHO05D009247 2.4e-87 327.0 485 42.9
arahy.Tifrunner.gnm1.ann1.33CL05 Arachis hypogaea HOM05D007356 ORTHO05D009247 4.1e-87 326.2 484 42.4
arahy.Tifrunner.gnm1.ann1.3VIJ8X Arachis hypogaea HOM05D007356 ORTHO05D009247 7.0e-87 325.5 487 42.3
Sabra17G0093200 Salix brachista HOM05D007356 ORTHO05D009247 1.2e-86 324.7 499 42.7
TWI31G0521 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 1.2e-86 324.7 486 43.8
MD17G1074100 Malus domestica HOM05D007356 ORTHO05D009247 3.5e-86 323.2 500 44.2
Cpa.g.sc179.26 Carica papaya HOM05D007356 ORTHO05D009247 1.0e-85 321.6 494 43.3
FvH4_6g45360 Fragaria vesca HOM05D007356 ORTHO05D009247 1.1e-84 318.2 481 45.7
Gohir.A11G162300 Gossypium hirsutum HOM05D007356 ORTHO05D009247 1.1e-84 318.2 492 43.3
THA.LOC104820954 Tarenaya hassleriana HOM05D007356 ORTHO05D009247 3.3e-84 316.6 497 42.3
FAN14G2396 Fragaria x ananassa HOM05D007356 ORTHO05D009247 2.1e-83 313.9 479 44.5
TWI79G1397 Tripterygium wilfordii HOM05D007356 ORTHO05D009247 4.7e-83 312.8 450 45.1
COL.COLO4_16192 Corchorus olitorius HOM05D007356 ORTHO05D009247 1.0e-82 311.6 487 43.7
TPR.G32461 Trifolium pratense HOM05D007356 ORTHO05D009247 6.8e-82 308.9 493 42.4
vmacro05573 Vaccinium macrocarpon HOM05D007356 ORTHO05D009247 8.9e-82 308.5 521 40.9
Hund13734 Selenicereus undatus HOM05D007356 ORTHO05D009247 2.2e-80 303.9 506 40.3
Ah.16g101940 Amaranthus hybridus HOM05D007356 ORTHO05D009247 6.4e-80 302.4 499 40.3
Lj2g0005002 Lotus japonicus HOM05D007356 ORTHO05D009247 6.4e-80 302.4 495 40.6
Gorai.007G180100 Gossypium raimondii HOM05D007356 ORTHO05D009247 2.4e-79 300.4 483 42.9
CDE08G0776 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 3.2e-79 300.1 501 40.7
HanXRQChr14g0438671 Helianthus annuus HOM05D007356 ORTHO05D009247 2.0e-78 297.4 491 43.8
Gohir.D11G168600 Gossypium hirsutum HOM05D007356 ORTHO05D009247 3.5e-78 296.6 483 42.7
PGSC0003DMG400012678 Solanum tuberosum HOM05D007356 ORTHO05D009247 4.7e-75 286.2 456 41.7
Cc07_g09030 Coffea canephora HOM05D007356 ORTHO05D009247 1.4e-74 284.6 509 39.1
Glyma.13G047100 Glycine max HOM05D007356 ORTHO05D009247 1.8e-74 284.3 494 39.5
Lalb_Chr06g0174681 Lupinus albus HOM05D007356 ORTHO05D009247 9.8e-73 278.5 485 38.8
Potri.004G102400 Populus trichocarpa HOM05D007356 ORTHO05D009247 3.7e-72 276.6 409 42.5
Solyc02g085740.4 Solanum lycopersicum HOM05D007356 ORTHO05D009247 3.7e-72 276.6 453 40.8
Aqoxy3G02147 Aquilegia oxysepala HOM05D007356 ORTHO05D009247 8.3e-72 275.4 146 99.3
AL3G11850 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 8.3e-72 275.4 508 40.4
Sopen02g030430 Solanum pennellii HOM05D007356 ORTHO05D009247 8.3e-72 275.4 457 40.7
SGA_v2.0_scaffold33G13428 Striga asiatica HOM05D007356 ORTHO05D009247 4.1e-71 273.1 478 38.7
Aa31LG5G12990 Aethionema arabicum HOM05D007356 ORTHO05D009247 7.1e-71 272.3 492 39.2
Phvul.004G062800 Phaseolus vulgaris HOM05D007356 ORTHO05D009247 2.7e-70 270.4 496 39.3
Migut.H00199 Erythranthe guttata HOM05D007356 ORTHO05D009247 6.0e-70 269.2 487 38.8
VMungo0464G1268 Vigna mungo HOM05D007356 ORTHO05D009247 1.7e-69 267.7 497 39.4
EL10Ac2g04607 Beta vulgaris HOM05D007356 ORTHO05D009247 5.1e-69 266.2 591 34.2
Medtr6g017235 Medicago truncatula HOM05D007356 ORTHO05D009247 6.6e-69 265.8 424 40.6
Actinidia18124 Actinidia chinensis HOM05D007356 ORTHO05D009247 8.6e-69 265.4 412 44.9
CSS0016710 Camellia sinensis var. sinensis HOM05D007356 ORTHO05D009247 1.1e-68 265.0 417 44.6
Nitab4.5_0008781g0020 Nicotiana tabacum HOM05D007356 ORTHO05D009247 2.5e-68 263.8 459 39.2
AUR62014539 Chenopodium quinoa HOM05D007356 ORTHO05D009247 5.6e-68 262.7 467 39.0
CARHR076490 Cardamine hirsuta HOM05D007356 ORTHO05D009247 1.2e-67 261.5 497 39.0
Peaxi162Scf01327g00135 Petunia axillaris HOM05D007356 ORTHO05D009247 3.1e-66 256.9 460 38.9
Oeu030757.2 Olea europaea HOM05D007356 ORTHO05D009247 3.7e-64 250.0 447 37.8
Psat1g012920 Pisum sativum HOM05D007356 ORTHO05D009247 1.6e-62 244.6 346 43.1
ECA232G5000 Erigeron canadensis HOM05D007356 ORTHO05D009247 2.7e-62 243.8 359 44.3
CDE02G0316 Ceratophyllum demersum HOM05D007356 ORTHO05D009247 3.5e-62 243.4 431 41.5
Nitab4.5_0004118g0090 Nicotiana tabacum HOM05D007356 ORTHO05D009247 1.9e-60 237.7 434 39.6
DCAR_017218 Daucus carota HOM05D007356 ORTHO05D009247 4.3e-60 236.5 458 38.0
Eucgr.J01469 Eucalyptus grandis HOM05D007356 ORTHO05D009247 1.4e-58 231.5 409 36.4
AUR62008964 Chenopodium quinoa HOM05D007356 ORTHO05D009247 2.4e-55 220.7 367 36.8
Sed0002469 Sechium edule HOM05D007356 ORTHO05D009247 1.3e-53 214.9 280 46.8
unitig_60.g25515 Utricularia gibba HOM05D007356 ORTHO05D009247 7.3e-52 209.1 478 31.6
ATR0681G386 Amborella trichopoda HOM05D007356 ORTHO05D009247 6.2e-51 206.1 548 32.7
RcHm_v2.0_Chr2g0163141 Rosa chinensis HOM05D007356 ORTHO05D009247 4.9e-48 196.4 331 41.1
MELO3C023764.2 Cucumis melo HOM05D007356 ORTHO05D009247 9.3e-47 192.2 301 42.5
FAN09G4466 Fragaria x ananassa HOM05D007356 ORTHO05D009247 9.3e-47 192.2 320 39.4
PGR042G1693 Punica granatum HOM05D007356 ORTHO05D009247 1.7e-45 188.0 496 32.7
Ca_26179_v3 Cicer arietinum L. HOM05D007356 ORTHO05D009247 4.3e-44 183.3 289 40.1
Os01g0694200 Oryza sativa ssp. japonica HOM05D007356 ORTHO05D009247 9.6e-44 182.2 471 32.7
GSVIVG01036444001 Vitis vinifera HOM05D007356 ORTHO05D009247 1.4e-42 178.3 188 51.1
Zm00001eb155990 Zea mays HOM05D007356 ORTHO05D009247 1.2e-41 175.3 465 34.4
Lj2A447T55 Lonicera japonica HOM05D007356 ORTHO05D009247 3.4e-41 173.7 171 53.2
Sc11g0008200 Simmondsia chinensis HOM05D007356 ORTHO05D009247 4.5e-41 173.3 312 41.0
CiPaw.03G059600 Carya illinoinensis HOM05D007356 ORTHO05D009247 5.4e-39 166.4 303 35.3
AL3G11840 Arabidopsis lyrata HOM05D007356 ORTHO05D009247 5.8e-33 146.4 232 44.8
Sed0015927 Sechium edule HOM05D007356 ORTHO05D009247 2.3e-29 134.4 169 43.8
Sc11g0008210 Simmondsia chinensis HOM05D007356 ORTHO05D009247 7.9e-22 109.4 158 41.8
Lsat_1_v5_gn_3_87441 Lactuca sativa HOM05D007356 ORTHO05D009247 3.0e-21 107.5 119 51.3
SMO145G0090 Selaginella moellendorffii HOM05D007356 ORTHO05D009247 5.1e-21 106.7 541 26.8
Glyma.19G045202 Glycine max HOM05D007356 ORTHO05D009247 2.6e-17 94.4 209 35.4
SEGI_12886 Sequoiadendron giganteum HOM05D007356 ORTHO05D009247 5.0e-16 90.1 256 27.7
Actinidia15867 Actinidia chinensis HOM05D007356 ORTHO05D009247 1.1e-12 79.0 89 46.1
AUR62035477 Chenopodium quinoa HOM05D000128 ORTHO05D000059 2.8e-11 74.3 90 42.2
AagrBONN_evm.TU.Sc2ySwM_344.3211 Anthoceros agrestis HOM05D007356 ORTHO05D009247 1.4e-10 72.0 218 27.1
Lj2C447T11 Lonicera japonica HOM05D007356 ORTHO05D009247 1.5e-09 68.6 58 56.9
Pp3c15_5150 Physcomitrium patens HOM05D007356 ORTHO05D009247 1.0e-08 65.9 104 39.4
Pp3c9_14770 Physcomitrium patens HOM05D007356 ORTHO05D009247 1.0e-08 65.9 104 38.5
Mapoly0080s0048 Marchantia polymorpha HOM05D007356 ORTHO05D009247 2.2e-08 64.7 357 25.8


User provided reference genes

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