Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03838 Aquilegia oxysepala HOM05D007408 ORTHO05D009325 7.7e-80 300.4 153 100.0
TAR629G0610 Trochodendron aralioides HOM05D007408 ORTHO05D009325 1.4e-25 120.2 152 45.4
CiPaw.06G098200 Carya illinoinensis HOM05D007408 ORTHO05D009325 2.3e-20 102.8 156 45.5
TWI79G0837 Tripterygium wilfordii HOM05D007408 ORTHO05D009325 7.5e-19 97.8 155 36.8
PSO782G1144 Papaver somniferum HOM05D007408 ORTHO05D009325 3.7e-18 95.5 144 42.4
Manes.06G075900 Manihot esculenta HOM05D007408 ORTHO05D009325 2.4e-17 92.8 151 39.1
VMungo0251G2162 Vigna mungo HOM05D007408 ORTHO05D009325 1.6e-16 90.1 155 36.1
Potri.008G111500 Populus trichocarpa HOM05D007408 ORTHO05D009325 2.7e-16 89.4 157 39.5
Prupe.1G301300 Prunus persica HOM05D007408 ORTHO05D009325 7.8e-16 87.8 155 38.7
Sabra08G0084200 Salix brachista HOM05D007408 ORTHO05D009325 7.8e-16 87.8 132 41.7
Atru.chr11.1432 Acer truncatum HOM05D007408 ORTHO05D009325 1.0e-15 87.4 167 38.3
CANSAT64G2960 Cannabis sativa HOM05D007408 ORTHO05D009325 1.3e-15 87.0 169 37.3
PGR119G0146 Punica granatum HOM05D007408 ORTHO05D009325 3.0e-15 85.9 153 35.3
Phvul.003G281600 Phaseolus vulgaris HOM05D007408 ORTHO05D009325 3.9e-15 85.5 163 35.0
RcHm_v2.0_Chr4g0436431 Rosa chinensis HOM05D007408 ORTHO05D009325 3.9e-15 85.5 158 37.3
Cfa008792 Carpinus fangiana HOM05D007408 ORTHO05D009325 5.1e-15 85.1 158 38.0
Solyc05g010130.1 Solanum lycopersicum HOM05D007408 ORTHO05D009325 5.1e-15 85.1 149 40.3
Glyma.16G099500 Glycine max HOM05D007408 ORTHO05D009325 8.6e-15 84.3 158 36.1
Cpa.g.sc1.248 Carica papaya HOM05D007408 ORTHO05D009325 1.5e-14 83.6 154 37.7
Eucgr.B03072 Eucalyptus grandis HOM05D007408 ORTHO05D009325 1.5e-14 83.6 123 39.0
MD13G1050800 Malus domestica HOM05D007408 ORTHO05D009325 2.5e-14 82.8 152 35.5
Haze_11804 Corylus avellana HOM05D007408 ORTHO05D009325 4.3e-14 82.0 125 43.2
FAN07G2148 Fragaria x ananassa HOM05D000085 ORTHO05D000274 1.2e-13 80.5 121 39.7
FAN12G0389 Fragaria x ananassa HOM05D000085 ORTHO05D000274 1.2e-13 80.5 121 39.7
FAN17G1226 Fragaria x ananassa HOM05D000085 ORTHO05D000274 1.2e-13 80.5 121 39.7
Oeu024124.1 Olea europaea HOM05D007408 ORTHO05D009325 1.2e-13 80.5 147 34.0
Thecc.02G364900 Theobroma cacao HOM05D007408 ORTHO05D009325 1.6e-13 80.1 127 40.9
FAN22G2286 Fragaria x ananassa HOM05D000227 ORTHO05D001491 2.1e-13 79.7 121 39.7
Sc11g0002930 Simmondsia chinensis HOM05D007408 ORTHO05D009325 2.1e-13 79.7 150 40.0
Lalb_Chr20g0122411 Lupinus albus HOM05D007408 ORTHO05D009325 2.8e-13 79.3 156 32.7
PSO063G0414 Papaver somniferum HOM05D007408 ORTHO05D009325 2.8e-13 79.3 155 38.7
arahy.Tifrunner.gnm1.ann1.24G1QJ Arachis hypogaea HOM05D007408 ORTHO05D009325 3.6e-13 79.0 154 35.7
Cc11_g10990 Coffea canephora HOM05D007408 ORTHO05D009325 1.8e-12 76.6 127 38.6
Gorai.008G188700 Gossypium raimondii HOM05D007408 ORTHO05D009325 1.8e-12 76.6 156 34.0
Gohir.D12G176300 Gossypium hirsutum HOM05D007408 ORTHO05D009325 2.3e-12 76.3 156 33.3
Ciclev10033573m.g Citrus clementina HOM05D007408 ORTHO05D009325 5.2e-12 75.1 114 39.5
SalBow8G1270 Salvia bowleyana HOM05D007408 ORTHO05D009325 5.2e-12 75.1 127 40.2
SalBow8G3082 Salvia bowleyana HOM05D007408 ORTHO05D009325 5.2e-12 75.1 127 40.2
TPR.G24816 Trifolium pratense HOM05D007408 ORTHO05D009325 5.2e-12 75.1 157 34.4
DCAR_026703 Daucus carota HOM05D002818 ORTHO05D003244 1.2e-11 73.9 149 35.6
Gohir.A12G173800 Gossypium hirsutum HOM05D007408 ORTHO05D009325 1.2e-11 73.9 133 36.1
Migut.L01119 Erythranthe guttata HOM05D007408 ORTHO05D009325 7.6e-11 71.2 143 35.7
Medtr8g069910 Medicago truncatula HOM05D007408 ORTHO05D009325 7.6e-11 71.2 152 33.6
THA.LOC104822179 Tarenaya hassleriana HOM05D007408 ORTHO05D009325 1.3e-10 70.5 121 36.4
CsaV3_2G010890 Cucumis sativus L. HOM05D007408 ORTHO05D009325 3.8e-10 68.9 153 36.6
HanXRQChr15g0475971 Helianthus annuus HOM05D007408 ORTHO05D009325 4.9e-10 68.6 127 33.1
SGA_v2.0_scaffold36G14509 Striga asiatica HOM05D007408 ORTHO05D009325 4.9e-10 68.6 124 38.7
BcaC06g31130 Brassica carinata HOM05D007408 ORTHO05D009325 1.1e-09 67.4 124 35.5
CARHR146570 Cardamine hirsuta HOM05D007408 ORTHO05D009325 2.4e-09 66.2 169 30.8
Lj4g0027659 Lotus japonicus HOM05D007408 ORTHO05D009325 2.4e-09 66.2 154 30.5
Ah.02g127260 Amaranthus hybridus HOM05D007408 ORTHO05D009325 7.1e-09 64.7 144 29.9
HanXRQChr12g0365241 Helianthus annuus HOM05D007408 ORTHO05D009325 2.1e-08 63.2 129 31.8
A06p42710 Brassica napus HOM05D007408 ORTHO05D009325 2.7e-08 62.8 124 35.5
C07p34420 Brassica napus HOM05D007408 ORTHO05D009325 2.7e-08 62.8 124 35.5
BraA06t27184Z Brassica rapa HOM05D007408 ORTHO05D009325 2.7e-08 62.8 124 35.5
HanXRQChr17g0551421 Helianthus annuus HOM05D007408 ORTHO05D009325 2.7e-08 62.8 127 33.1
Sp2g14870 Schrenkiella parvula HOM05D007408 ORTHO05D009325 2.7e-08 62.8 153 32.7
BcaC06g33976 Brassica carinata HOM05D007408 ORTHO05D009325 4.6e-08 62.0 124 35.5
AT1G68700 Arabidopsis thaliana HOM05D007408 ORTHO05D009325 7.8e-08 61.2 144 29.9
Thhalv10005058m.g Eutrema salsugineum HOM05D007408 ORTHO05D009325 1.3e-07 60.5 152 33.6
Lsat_1_v5_gn_3_60200 Lactuca sativa HOM05D007408 ORTHO05D009325 1.3e-07 60.5 122 29.5
Carub.0005s0338 Capsella rubella HOM05D007408 ORTHO05D009325 2.3e-07 59.7 123 33.3
CARHR061510 Cardamine hirsuta HOM05D007408 ORTHO05D009325 3.0e-07 59.3 138 33.3
AT3G25597 Arabidopsis thaliana HOM05D007408 ORTHO05D009325 3.9e-07 58.9 126 32.5
Psat4g113200 Pisum sativum HOM05D007408 ORTHO05D009325 8.6e-07 57.8 147 30.6
AL5G14110 Arabidopsis lyrata HOM05D007408 ORTHO05D009325 1.1e-06 57.4 123 35.0
BcaB03g15828 Brassica carinata HOM05D007408 ORTHO05D009325 1.1e-06 57.4 140 29.3
A02p33920 Brassica napus HOM05D007408 ORTHO05D009325 1.5e-06 57.0 124 33.9
BcaC03g17274 Brassica carinata HOM05D007408 ORTHO05D009325 2.5e-06 56.2 151 30.5
C02p52180 Brassica napus HOM05D007408 ORTHO05D009325 2.5e-06 56.2 151 30.5
BolC2t11303H Brassica oleracea HOM05D007408 ORTHO05D009325 2.5e-06 56.2 151 30.5
BraA02t08410Z Brassica rapa HOM05D007408 ORTHO05D009325 3.3e-06 55.8 124 33.1
BcaB07g30265 Brassica carinata HOM05D007408 ORTHO05D009325 4.3e-06 55.5 151 31.1
Sp5g23800 Schrenkiella parvula HOM05D007408 ORTHO05D009325 4.3e-06 55.5 139 28.8
THA.LOC104805235 Tarenaya hassleriana HOM05D007408 ORTHO05D009325 5.6e-06 55.1 151 33.1
MELO3C020393.2 Cucumis melo HOM05D007408 ORTHO05D009325 9.6e-06 54.3 155 33.5


User provided reference genes

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