Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03749 Aquilegia oxysepala HOM05D005253 ORTHO05D006058 6.4e-178 627.5 359 100.0
PSO017G7367 Papaver somniferum HOM05D005253 ORTHO05D006058 1.3e-74 284.3 345 53.3
PSO478G2666 Papaver somniferum HOM05D005253 ORTHO05D006058 2.4e-68 263.5 345 51.0
MBI14_g08108_MAGBIO Magnolia biondii HOM05D005253 ORTHO05D006058 2.6e-62 243.4 347 48.1
Dinv38642 Davidia involucrata HOM05D005253 ORTHO05D006058 1.9e-60 237.3 351 43.6
TWI60G1362 Tripterygium wilfordii HOM05D005253 ORTHO05D006058 2.1e-59 233.8 341 44.6
GSVIVG01008154001 Vitis vinifera HOM05D005253 ORTHO05D006058 1.3e-58 231.1 366 42.6
Glyma.05G018200 Glycine max HOM05D005253 ORTHO05D006058 2.3e-58 230.3 344 44.2
Duzib205G1609 Durio zibethinus HOM05D005253 ORTHO05D006058 5.1e-58 229.2 342 44.2
Rhsim08G0142100 Rhododendron simsii HOM05D005253 ORTHO05D006058 1.5e-57 227.6 352 45.7
Aqoxy3G00549 Aquilegia oxysepala HOM05D005253 ORTHO05D006058 3.3e-57 226.5 341 49.9
Gohir.D07G063700 Gossypium hirsutum HOM05D005253 ORTHO05D006058 5.6e-57 225.7 343 42.0
Haze_18511 Corylus avellana HOM05D005253 ORTHO05D006058 1.6e-56 224.2 342 44.2
Glyma.17G081700 Glycine max HOM05D005253 ORTHO05D006058 3.6e-56 223.0 344 43.3
TAR371G0033 Trochodendron aralioides HOM05D005253 ORTHO05D006058 1.1e-55 221.5 347 44.7
Gohir.A09G243900 Gossypium hirsutum HOM05D005253 ORTHO05D006058 2.4e-55 220.3 340 43.5
Gorai.001G067300 Gossypium raimondii HOM05D005253 ORTHO05D006058 2.4e-55 220.3 343 44.0
Cfa017731 Carpinus fangiana HOM05D005253 ORTHO05D006058 5.3e-55 219.2 341 42.8
TWI81G0215 Tripterygium wilfordii HOM05D005253 ORTHO05D006058 1.3e-53 214.5 343 41.1
vmacro17641 Vaccinium macrocarpon HOM05D005253 ORTHO05D006058 1.7e-53 214.2 372 41.9
Duzib068G0534 Durio zibethinus HOM05D005253 ORTHO05D006058 2.9e-53 213.4 346 41.9
arahy.Tifrunner.gnm1.ann1.TSF3K2 Arachis hypogaea HOM05D005253 ORTHO05D006058 2.4e-52 210.3 347 40.6
Ciclev10020920m.g Citrus clementina HOM05D005253 ORTHO05D006058 3.2e-52 209.9 346 41.9
Prupe.5G210000 Prunus persica HOM05D005253 ORTHO05D006058 5.4e-52 209.1 341 43.4
Lj4g0025893 Lotus japonicus HOM05D005253 ORTHO05D006058 7.1e-52 208.8 324 43.2
Cpa.g.sc3.232 Carica papaya HOM05D005253 ORTHO05D006058 2.1e-51 207.2 341 46.0
TPR.G1989 Trifolium pratense HOM05D005253 ORTHO05D006058 2.7e-51 206.8 342 40.9
PSO782G3834 Papaver somniferum HOM05D005253 ORTHO05D006058 4.6e-51 206.1 372 40.3
arahy.Tifrunner.gnm1.ann1.399KXC Arachis hypogaea HOM05D005253 ORTHO05D006058 7.9e-51 205.3 347 39.8
Phvul.003G182200 Phaseolus vulgaris HOM05D005253 ORTHO05D006058 1.0e-50 204.9 340 42.1
Thhalv10014100m.g Eutrema salsugineum HOM05D005253 ORTHO05D006058 1.3e-50 204.5 334 41.6
Gohir.A07G058832 Gossypium hirsutum HOM05D005253 ORTHO05D006058 1.3e-50 204.5 343 39.9
Lalb_Chr13g0302681 Lupinus albus HOM05D005253 ORTHO05D006058 2.3e-50 203.8 310 42.6
Medtr4g109960 Medicago truncatula HOM05D005253 ORTHO05D006058 2.3e-50 203.8 346 41.0
Nn3g17535 Nelumbo nucifera HOM05D005253 ORTHO05D006058 2.3e-50 203.8 350 42.6
MD14G1216600 Malus domestica HOM05D005253 ORTHO05D006058 3.0e-50 203.4 340 41.8
Potri.004G107000 Populus trichocarpa HOM05D005253 ORTHO05D006058 5.1e-50 202.6 354 41.5
Gorai.006G268700 Gossypium raimondii HOM05D005253 ORTHO05D006058 1.9e-49 200.7 340 40.3
PSO063G5368 Papaver somniferum HOM05D005253 ORTHO05D006058 3.3e-49 199.9 372 40.1
VMungo1215G3162 Vigna mungo HOM05D005253 ORTHO05D006058 5.6e-49 199.1 340 41.5
Dinv17459 Davidia involucrata HOM05D005253 ORTHO05D006058 7.4e-49 198.7 320 44.4
TPR.G2086 Trifolium pratense HOM05D005253 ORTHO05D006058 1.3e-48 198.0 321 42.4
MD06G1205700 Malus domestica HOM05D005253 ORTHO05D006058 2.1e-48 197.2 339 41.3
SGA_v2.0_scaffold65G22104 Striga asiatica HOM05D005253 ORTHO05D006058 4.8e-48 196.1 336 42.0
Sed0023471 Sechium edule HOM05D005253 ORTHO05D006058 1.1e-47 194.9 348 39.4
CANSAT80G0823 Cannabis sativa HOM05D005253 ORTHO05D006058 1.4e-47 194.5 343 39.9
Gohir.D09G244600 Gossypium hirsutum HOM05D005253 ORTHO05D006058 3.1e-47 193.4 336 40.5
Cc04_g08280 Coffea canephora HOM05D005253 ORTHO05D006058 4.0e-47 193.0 349 40.4
CARHR205070 Cardamine hirsuta HOM05D005253 ORTHO05D006058 9.0e-47 191.8 337 42.7
Sc04g0003900 Simmondsia chinensis HOM05D005253 ORTHO05D006058 1.5e-46 191.0 303 43.2
AL6G18490 Arabidopsis lyrata HOM05D005253 ORTHO05D006058 2.0e-46 190.7 333 39.0
ClCG04G011560 Citrullus lanatus HOM05D005253 ORTHO05D006058 2.6e-46 190.3 352 43.8
COL.COLO4_27496 Corchorus olitorius HOM05D005253 ORTHO05D006058 2.6e-46 190.3 339 39.2
Ca_21755_v3 Cicer arietinum L. HOM05D005253 ORTHO05D006058 3.4e-46 189.9 344 45.3
Peaxi162Scf00365g00114 Petunia axillaris HOM05D005253 ORTHO05D006058 4.5e-46 189.5 348 39.7
AT5G08120 Arabidopsis thaliana HOM05D005253 ORTHO05D006058 1.7e-45 187.6 333 38.4
ATR0691G224 Amborella trichopoda HOM05D005253 ORTHO05D006058 2.2e-45 187.2 322 42.9
Manes.14G089100 Manihot esculenta HOM05D005253 ORTHO05D006058 2.2e-45 187.2 351 39.3
MELO3C002054.2 Cucumis melo HOM05D005253 ORTHO05D006058 8.4e-45 185.3 359 44.0
Nitab4.5_0002467g0110 Nicotiana tabacum HOM05D005253 ORTHO05D006058 1.1e-44 184.9 346 39.0
THA.LOC104818357 Tarenaya hassleriana HOM05D005253 ORTHO05D006058 1.1e-44 184.9 338 38.8
FAN13G1214 Fragaria x ananassa HOM05D005253 ORTHO05D006058 1.4e-44 184.5 331 41.7
Glyma.04G159100 Glycine max HOM05D005253 ORTHO05D006058 2.5e-44 183.7 333 36.3
Lj1g0009577 Lotus japonicus HOM05D005253 ORTHO05D006058 3.2e-44 183.3 302 41.4
EL10Ac5g11189 Beta vulgaris HOM05D005253 ORTHO05D006058 4.2e-44 183.0 303 42.2
AUR62039667 Chenopodium quinoa HOM05D005253 ORTHO05D006058 7.1e-44 182.2 317 41.6
CSS0036905 Camellia sinensis var. sinensis HOM05D005253 ORTHO05D006058 1.2e-43 181.4 350 39.4
FvH4_5g13401 Fragaria vesca HOM05D005253 ORTHO05D006058 1.2e-43 181.4 331 41.7
MSTRG.9581 Avicennia marina HOM05D005253 ORTHO05D006058 1.6e-43 181.0 341 38.4
FAN08G1625 Fragaria x ananassa HOM05D005253 ORTHO05D006058 1.6e-43 181.0 333 40.2
BcaB08g37285 Brassica carinata HOM05D005253 ORTHO05D006058 3.5e-43 179.9 334 38.9
C09p68830 Brassica napus HOM05D005253 ORTHO05D006058 3.5e-43 179.9 334 38.9
RcHm_v2.0_Chr7g0183731 Rosa chinensis HOM05D005253 ORTHO05D006058 3.5e-43 179.9 335 39.1
Hund09956 Selenicereus undatus HOM05D005253 ORTHO05D006058 1.0e-42 178.3 325 40.0
Hma1.2p1_0060F.1_g032740 Hydrangea macrophylla HOM05D005253 ORTHO05D006058 3.9e-42 176.4 393 37.2
Manes.06G080800 Manihot esculenta HOM05D005253 ORTHO05D006058 3.9e-42 176.4 356 39.0
Peaxi162Scf00017g03254 Petunia axillaris HOM05D005253 ORTHO05D006058 8.7e-42 175.3 346 38.2
Zm00001eb380690 Zea mays HOM05D005253 ORTHO05D006058 8.7e-42 175.3 289 40.8
BraA10t44904Z Brassica rapa HOM05D005253 ORTHO05D006058 1.1e-41 174.9 336 37.8
Solyc03g114760.3 Solanum lycopersicum HOM05D005253 ORTHO05D006058 1.5e-41 174.5 345 38.3
Ah.02g114240 Amaranthus hybridus HOM05D005253 ORTHO05D006058 3.3e-41 173.3 314 39.5
Zm00001eb280850 Zea mays HOM05D005253 ORTHO05D006058 5.7e-41 172.6 289 40.8
FAN18G4071 Fragaria x ananassa HOM05D005253 ORTHO05D006058 9.6e-41 171.8 347 39.8
ECA246G0831 Erigeron canadensis HOM05D005253 ORTHO05D006058 1.3e-40 171.4 335 38.8
Sp6g34840 Schrenkiella parvula HOM05D005253 ORTHO05D006058 1.3e-40 171.4 333 40.5
SalBow7G2030 Salvia bowleyana HOM05D005253 ORTHO05D006058 1.6e-40 171.0 351 39.3
Nitab4.5_0005994g0050 Nicotiana tabacum HOM05D005253 ORTHO05D006058 2.8e-40 170.2 343 37.3
Oeu014427.1 Olea europaea HOM05D005253 ORTHO05D006058 2.8e-40 170.2 335 39.7
Migut.D01615 Erythranthe guttata HOM05D005253 ORTHO05D006058 3.7e-40 169.9 333 39.6
SHI17413 Sapria himalayana HOM05D005253 ORTHO05D006058 4.8e-40 169.5 330 39.4
Ah.11g047400 Amaranthus hybridus HOM05D005253 ORTHO05D006058 6.2e-40 169.1 289 42.2
BolC9t59630H Brassica oleracea HOM05D005253 ORTHO05D006058 6.2e-40 169.1 336 40.8
Sopen03g033840 Solanum pennellii HOM05D005253 ORTHO05D006058 6.2e-40 169.1 345 38.0
unitig_578.g15937 Utricularia gibba HOM05D005253 ORTHO05D006058 6.2e-40 169.1 338 39.1
Hund02544 Selenicereus undatus HOM05D005253 ORTHO05D006058 1.1e-39 168.3 301 40.9
Aa31LG3G18420 Aethionema arabicum HOM05D005253 ORTHO05D006058 1.4e-39 167.9 334 43.4
DCAR_010175 Daucus carota HOM05D005253 ORTHO05D006058 4.0e-39 166.4 349 40.1
Prupe.8G074000 Prunus persica HOM05D005253 ORTHO05D006058 9.0e-39 165.2 236 45.3
QL10p020742 Quercus lobata HOM05D005253 ORTHO05D006058 9.0e-39 165.2 506 31.2
Lsat_1_v5_gn_5_23380 Lactuca sativa HOM05D005253 ORTHO05D006058 1.5e-38 164.5 346 38.4
Nitab4.5_0002041g0040 Nicotiana tabacum HOM05D005253 ORTHO05D006058 2.0e-38 164.1 345 36.8
PGR044G0085 Punica granatum HOM05D005253 ORTHO05D006058 5.8e-38 162.5 342 36.8
PGSC0003DMG400024524 Solanum tuberosum HOM05D005253 ORTHO05D006058 5.0e-37 159.5 345 36.5
Os06g0284800 Oryza sativa ssp. japonica HOM05D005253 ORTHO05D006058 1.1e-36 158.3 288 44.4
A10p28550 Brassica napus HOM05D005253 ORTHO05D006058 1.4e-36 157.9 334 36.2
Sabra04G0074900 Salix brachista HOM05D005253 ORTHO05D006058 1.9e-36 157.5 288 46.2
CDE05G1733 Ceratophyllum demersum HOM05D005253 ORTHO05D006058 2.1e-35 154.1 337 36.2
Eucgr.K02550 Eucalyptus grandis HOM05D005253 ORTHO05D006058 7.9e-35 152.1 256 39.8
HPP92_015550 Vanilla planifolia HOM05D005253 ORTHO05D006058 1.8e-34 151.0 296 36.1
CsaV3_1G006260 Cucumis sativus L. HOM05D005253 ORTHO05D006058 2.3e-34 150.6 357 40.3
HanXRQChr05g0157441 Helianthus annuus HOM05D005253 ORTHO05D006058 3.9e-34 149.8 343 37.0
unitig_8.g4498 Utricularia gibba HOM05D005253 ORTHO05D006058 1.1e-33 148.3 339 37.8
AUR62032138 Chenopodium quinoa HOM05D005253 ORTHO05D006058 1.5e-33 147.9 317 37.9
Lj9C438G4 Lonicera japonica HOM05D005253 ORTHO05D006058 2.5e-33 147.1 328 35.7
Atru.chr4.1592 Acer truncatum HOM05D005253 ORTHO05D006058 3.3e-33 146.7 351 37.9
Psat4g046080 Pisum sativum HOM05D005253 ORTHO05D006058 1.6e-32 144.4 333 40.5
HPP92_019902 Vanilla planifolia HOM05D005253 ORTHO05D006058 4.8e-32 142.9 289 36.7
CAN.G982.39 Capsicum annuum HOM05D005253 ORTHO05D006058 1.5e-30 137.9 445 29.4
Carub.0006s0700 Capsella rubella HOM05D005253 ORTHO05D006058 7.7e-30 135.6 330 32.4
Thecc.03G108400 Theobroma cacao HOM05D005253 ORTHO05D006058 5.0e-29 132.9 238 38.2
BcaB08g37286 Brassica carinata HOM05D005460 ORTHO05D006058 5.5e-28 129.4 201 47.3
HanXRQChr02g0051141 Helianthus annuus HOM05D005253 ORTHO05D006058 2.7e-27 127.1 309 35.3
arahy.Tifrunner.gnm1.ann1.4B3W67 Arachis hypogaea HOM05D005253 ORTHO05D006058 1.8e-26 124.4 320 40.9
Nitab4.5_0001797g0020 Nicotiana tabacum HOM05D005253 ORTHO05D006058 2.5e-25 120.6 241 37.3
CiPaw.16G080100 Carya illinoinensis HOM05D005253 ORTHO05D006058 3.7e-24 116.7 261 37.5
CDE02G3817 Ceratophyllum demersum HOM05D005253 ORTHO05D006058 4.8e-24 116.3 335 32.5
arahy.Tifrunner.gnm1.ann1.U6KDHT Arachis hypogaea HOM05D005253 ORTHO05D006058 8.2e-24 115.5 319 39.8
Nn4g23537 Nelumbo nucifera HOM05D005253 ORTHO05D006058 6.5e-21 105.9 94 66.0
Actinidia04794 Actinidia chinensis HOM05D005253 ORTHO05D006058 3.2e-20 103.6 123 52.8
SEGI_36320 Sequoiadendron giganteum HOM05D005253 ORTHO05D006058 3.6e-19 100.1 389 27.8
Os09g0476000 Oryza sativa ssp. japonica HOM05D005253 ORTHO05D006058 1.8e-18 97.8 188 34.6
TAR629G1609 Trochodendron aralioides HOM05D004464 ORTHO05D005135 2.2e-16 90.9 273 31.1
Actinidia04795 Actinidia chinensis HOM05D005253 ORTHO05D006058 2.8e-16 90.5 131 45.8
Nn4g23536 Nelumbo nucifera HOM05D005253 ORTHO05D006058 1.4e-15 88.2 92 52.2
Peaxi162Scf00091g00143 Petunia axillaris HOM05D005253 ORTHO05D006058 1.8e-15 87.8 230 32.2
Oeu014549.1 Olea europaea HOM05D005253 ORTHO05D006058 5.9e-14 82.8 99 55.6
PSO063G4277 Papaver somniferum HOM05D005253 ORTHO05D006058 2.2e-13 80.9 115 45.2
Actinidia10441 Actinidia chinensis HOM05D005253 ORTHO05D006058 1.1e-12 78.6 127 44.9
Zm00001eb315970 Zea mays HOM05D005253 ORTHO05D006058 9.4e-12 75.5 253 28.5
Oeu051243.1 Olea europaea HOM05D005253 ORTHO05D006058 6.7e-10 69.3 88 48.9
TPR.G28909 Trifolium pratense HOM05D005253 ORTHO05D006058 5.7e-09 66.2 108 40.7
SMO134G0145 Selaginella moellendorffii HOM05D025852 ORTHO05D006058 4.5e-06 56.6 316 24.4


User provided reference genes

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