Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03726 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 3.0e-215 751.5 363 100.0
Aqoxy4G00762 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 1.4e-188 662.9 363 90.6
Aqoxy5G03390 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 1.1e-180 636.7 317 97.5
Aqoxy3G02634 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 2.2e-133 479.6 250 94.8
arahy.Tifrunner.gnm1.ann1.L1792D Arachis hypogaea HOM05D004937 ORTHO05D006414 6.0e-83 312.0 281 55.5
Gohir.D06G214000 Gossypium hirsutum HOM05D004937 ORTHO05D006414 6.7e-82 308.5 286 55.2
Gorai.010G252100 Gossypium raimondii HOM05D004937 ORTHO05D006414 6.7e-82 308.5 286 55.2
Gohir.A06G207300 Gossypium hirsutum HOM05D004937 ORTHO05D006414 1.5e-81 307.4 286 54.9
vmacro15793 Vaccinium macrocarpon HOM05D004937 ORTHO05D006414 3.3e-81 306.2 280 56.1
Psat4g006200 Pisum sativum HOM05D004937 ORTHO05D006414 5.6e-81 305.4 276 56.2
arahy.Tifrunner.gnm1.ann1.VWCB5J Arachis hypogaea HOM05D004937 ORTHO05D006414 9.6e-81 304.7 281 55.5
EL10Ac8g20076 Beta vulgaris HOM05D004937 ORTHO05D006414 1.6e-80 303.9 270 55.9
Thecc.06G222700 Theobroma cacao HOM05D004937 ORTHO05D006414 3.7e-80 302.8 279 55.2
TPR.G22185 Trifolium pratense HOM05D004937 ORTHO05D006414 4.8e-80 302.4 276 54.7
Rhsim02G0106300 Rhododendron simsii HOM05D004937 ORTHO05D006414 6.2e-80 302.0 270 56.3
CSS0033735 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 8.2e-80 301.6 286 52.4
Ciclev10014440m.g Citrus clementina HOM05D004937 ORTHO05D006414 1.1e-79 301.2 281 54.8
Lj1A1232T94 Lonicera japonica HOM05D004937 ORTHO05D006414 1.1e-79 301.2 276 55.4
Cc09_g01540 Coffea canephora HOM05D004937 ORTHO05D000904 2.4e-79 300.1 270 54.4
Manes.16G005800 Manihot esculenta HOM05D004937 ORTHO05D006414 3.1e-79 299.7 271 55.0
Prupe.4G019000 Prunus persica HOM05D004937 ORTHO05D006414 4.0e-79 299.3 278 56.1
Haze_06813 Corylus avellana HOM05D004937 ORTHO05D006414 5.3e-79 298.9 277 55.2
Glyma.17G012400 Glycine max HOM05D004937 ORTHO05D006414 5.3e-79 298.9 285 51.6
Nn1g07169 Nelumbo nucifera HOM05D004937 ORTHO05D006414 9.0e-79 298.1 271 55.7
QL05p072835 Quercus lobata HOM05D004937 ORTHO05D006414 2.0e-78 297.0 271 55.0
CANSAT56G3877 Cannabis sativa HOM05D004937 ORTHO05D006414 2.6e-78 296.6 278 54.3
TWI63G0901 Tripterygium wilfordii HOM05D004937 ORTHO05D006414 4.5e-78 295.8 271 55.7
CiPaw.09G093200 Carya illinoinensis HOM05D004937 ORTHO05D006414 5.8e-78 295.4 279 53.4
DCAR_024931 Daucus carota HOM05D004937 ORTHO05D006414 5.8e-78 295.4 271 55.0
VMungo1215G2760 Vigna mungo HOM05D004937 ORTHO05D006414 7.6e-78 295.0 274 52.6
Phvul.003G080000 Phaseolus vulgaris HOM05D004937 ORTHO05D006414 1.0e-77 294.7 271 53.1
Aqoxy1G02086 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 1.7e-77 293.9 265 54.7
MD10G1323300 Malus domestica HOM05D004937 ORTHO05D006414 1.7e-77 293.9 273 54.6
COL.COLO4_31792 Corchorus olitorius HOM05D004937 ORTHO05D006414 2.2e-77 293.5 279 53.8
TAR624G0274 Trochodendron aralioides HOM05D004937 ORTHO05D006414 2.9e-77 293.1 282 53.5
Hund23457 Selenicereus undatus HOM05D004937 ORTHO05D006414 3.8e-77 292.7 268 51.9
PSO541G5924 Papaver somniferum HOM05D004937 ORTHO05D006414 6.5e-77 292.0 276 53.3
Eucgr.D01342 Eucalyptus grandis HOM05D004937 ORTHO05D006414 1.1e-76 291.2 323 48.0
Medtr4g132300 Medicago truncatula HOM05D004937 ORTHO05D006414 2.5e-76 290.0 272 53.3
PSO675G1521 Papaver somniferum HOM05D004937 ORTHO05D006414 2.5e-76 290.0 276 52.9
Sabra04G0005400 Salix brachista HOM05D004937 ORTHO05D006414 2.5e-76 290.0 270 53.7
DCAR_028195 Daucus carota HOM05D004937 ORTHO05D006414 3.2e-76 289.7 270 54.1
Potri.004G010400 Populus trichocarpa HOM05D004937 ORTHO05D006414 3.2e-76 289.7 270 53.7
MSTRG.15996 Avicennia marina HOM05D004937 ORTHO05D006414 4.2e-76 289.3 268 53.0
Sc24g0000210 Simmondsia chinensis HOM05D004937 ORTHO05D006414 4.2e-76 289.3 271 53.5
PGR042G1615 Punica granatum HOM05D004937 ORTHO05D006414 7.1e-76 288.5 271 55.0
GSVIVG01012711001 Vitis vinifera HOM05D004937 ORTHO05D000904 1.6e-75 287.3 272 54.0
Lalb_Chr12g0196051 Lupinus albus HOM05D004937 ORTHO05D006414 2.1e-75 287.0 318 46.9
Glyma.07G261700 Glycine max HOM05D004937 ORTHO05D006414 3.5e-75 286.2 285 50.2
RcHm_v2.0_Chr5g0002731 Rosa chinensis HOM05D004937 ORTHO05D006414 6.0e-75 285.4 277 53.4
Lj4g0022599 Lotus japonicus HOM05D004937 ORTHO05D006414 7.9e-75 285.0 304 48.7
PSO017G1772 Papaver somniferum HOM05D004937 ORTHO05D006414 7.9e-75 285.0 275 52.7
Peaxi162Scf00394g00019 Petunia axillaris HOM05D004937 ORTHO05D006414 7.9e-75 285.0 278 51.8
Aa31LG1G2970 Aethionema arabicum HOM05D004937 ORTHO05D006414 1.0e-74 284.6 279 53.0
Migut.M01330 Erythranthe guttata HOM05D004937 ORTHO05D000904 3.0e-74 283.1 368 44.0
HanXRQChr15g0470651 Helianthus annuus HOM05D004937 ORTHO05D006414 3.0e-74 283.1 268 52.2
AL1G22990 Arabidopsis lyrata HOM05D004937 ORTHO05D006414 1.1e-73 281.2 278 51.4
THA.LOC104809500 Tarenaya hassleriana HOM05D004937 ORTHO05D006414 1.1e-73 281.2 277 52.3
SalBow8G2768 Salvia bowleyana HOM05D004937 ORTHO05D006414 1.5e-73 280.8 325 47.7
Cpa.g.sc152.26 Carica papaya HOM05D004937 ORTHO05D006414 2.5e-73 280.0 278 51.1
ECA236G0630 Erigeron canadensis HOM05D004937 ORTHO05D006414 2.5e-73 280.0 267 52.1
FAN21G0664 Fragaria x ananassa HOM05D004937 ORTHO05D006414 2.5e-73 280.0 277 52.7
PSO675G7903 Papaver somniferum HOM05D004937 ORTHO05D006414 3.3e-73 279.6 276 52.2
FvH4_3g01860 Fragaria vesca HOM05D004937 ORTHO05D006414 4.3e-73 279.3 277 52.0
AUR62021933 Chenopodium quinoa HOM05D004937 ORTHO05D006414 5.7e-73 278.9 269 52.0
Nitab4.5_0011734g0010 Nicotiana tabacum HOM05D004937 ORTHO05D006414 9.7e-73 278.1 285 50.2
PSO541G2704 Papaver somniferum HOM05D004937 ORTHO05D006414 9.7e-73 278.1 276 51.4
AUR62012723 Chenopodium quinoa HOM05D004937 ORTHO05D006414 1.3e-72 277.7 269 51.7
Peaxi162Scf00307g01425 Petunia axillaris HOM05D004937 ORTHO05D006414 1.3e-72 277.7 278 50.7
HPP92_014181 Vanilla planifolia HOM05D004937 ORTHO05D006414 1.3e-72 277.7 369 45.0
Ca_21076_v3 Cicer arietinum L. HOM05D004937 ORTHO05D006414 3.7e-72 276.2 289 49.1
Sopen02g011270 Solanum pennellii HOM05D004937 ORTHO05D006414 3.7e-72 276.2 278 49.6
BraA09t41776Z Brassica rapa HOM05D004937 ORTHO05D006414 6.3e-72 275.4 279 49.8
Carub.0001s1147 Capsella rubella HOM05D004937 ORTHO05D006414 6.3e-72 275.4 278 49.6
MELO3C002448.2 Cucumis melo HOM05D004937 ORTHO05D006414 6.3e-72 275.4 278 49.6
Nitab4.5_0000005g0300 Nicotiana tabacum HOM05D004937 ORTHO05D006414 6.3e-72 275.4 285 50.2
HPP92_001597 Vanilla planifolia HOM05D004937 ORTHO05D006414 1.1e-71 274.6 302 47.7
ATR0794G089 Amborella trichopoda HOM05D004937 ORTHO05D006414 1.4e-71 274.2 277 49.1
PGSC0003DMG400019871 Solanum tuberosum HOM05D004937 ORTHO05D006414 1.8e-71 273.9 278 49.3
Sp1g10430 Schrenkiella parvula HOM05D004937 ORTHO05D006414 2.4e-71 273.5 279 51.3
AT1G11800 Arabidopsis thaliana HOM05D004937 ORTHO05D006414 3.1e-71 273.1 278 50.4
Lsat_1_v5_gn_7_16360 Lactuca sativa HOM05D004937 ORTHO05D006414 3.1e-71 273.1 268 51.1
BcaB08g37429 Brassica carinata HOM05D004937 ORTHO05D006414 4.1e-71 272.7 279 49.8
CsaV3_1G010670 Cucumis sativus L. HOM05D004937 ORTHO05D006414 5.3e-71 272.3 270 50.0
QL05p072858 Quercus lobata HOM05D004937 ORTHO05D006414 5.3e-71 272.3 290 50.0
Thhalv10006713m.g Eutrema salsugineum HOM05D004937 ORTHO05D000904 6.9e-71 271.9 279 52.0
Solyc02g032870.4 Solanum lycopersicum HOM05D004937 ORTHO05D006414 6.9e-71 271.9 278 48.9
SEGI_33731 Sequoiadendron giganteum HOM05D004937 ORTHO05D006414 9.0e-71 271.6 273 47.6
Sed0026378 Sechium edule HOM05D004937 ORTHO05D006414 1.2e-70 271.2 279 48.7
HanXRQChr05g0129391 Helianthus annuus HOM05D004937 ORTHO05D006414 1.5e-70 270.8 271 51.7
HPP92_001591 Vanilla planifolia HOM05D004937 ORTHO05D006414 1.5e-70 270.8 302 47.0
C08p47960 Brassica napus HOM05D004937 ORTHO05D006414 2.0e-70 270.4 279 48.7
BolC8t52333H Brassica oleracea HOM05D004937 ORTHO05D006414 2.0e-70 270.4 279 48.7
Dinv13907 Davidia involucrata HOM05D004937 ORTHO05D006414 4.5e-70 269.2 269 51.3
CARHR012140 Cardamine hirsuta HOM05D004937 ORTHO05D006414 5.9e-70 268.9 279 51.3
unitig_748.g7590 Utricularia gibba HOM05D004937 ORTHO05D006414 1.0e-69 268.1 316 45.3
Dinv20060 Davidia involucrata HOM05D004937 ORTHO05D006414 3.8e-69 266.2 285 49.5
A09p64340 Brassica napus HOM05D004937 ORTHO05D007797 8.5e-69 265.0 273 49.1
Haze_06812 Corylus avellana HOM05D004937 ORTHO05D006414 1.9e-68 263.8 270 52.6
BcaC07g41758 Brassica carinata HOM05D004937 ORTHO05D006414 3.2e-68 263.1 277 48.0
Hma1.2p1_3370F.1_g335650 Hydrangea macrophylla HOM05D004937 ORTHO05D006414 1.6e-67 260.8 258 50.8
Os12g0414900 Oryza sativa ssp. japonica HOM05D004937 ORTHO05D006414 3.6e-67 259.6 272 47.1
Pp3c20_16850 Physcomitrium patens HOM05D004937 ORTHO05D006414 4.6e-67 259.2 269 47.2
SMO361G0593 Selaginella moellendorffii HOM05D004937 ORTHO05D006414 1.4e-66 257.7 266 48.5
Zm00001eb043220 Zea mays HOM05D004937 ORTHO05D006414 8.8e-66 255.0 268 47.8
QL05p072840 Quercus lobata HOM05D004937 ORTHO05D006414 3.3e-65 253.1 273 51.3
Ah.14g087960 Amaranthus hybridus HOM05D004937 ORTHO05D006414 8.2e-64 248.4 268 48.5
Migut.M01331 Erythranthe guttata HOM05D004937 ORTHO05D006414 4.5e-62 242.7 265 48.7
Mapoly0028s0073 Marchantia polymorpha HOM05D004937 ORTHO05D006414 4.5e-62 242.7 276 43.8
AagrBONN_evm.TU.Sc2ySwM_368.2060 Anthoceros agrestis HOM05D004937 ORTHO05D006414 3.8e-61 239.6 250 48.0
Potri.004G010900 Populus trichocarpa HOM05D004937 ORTHO05D006414 4.2e-60 236.1 287 47.0
CDE02G2441 Ceratophyllum demersum HOM05D004937 ORTHO05D006414 5.5e-60 235.7 280 46.1
Sed0013617 Sechium edule HOM05D004937 ORTHO05D006414 1.5e-57 227.6 238 49.2
CBR_g38366 Chara braunii HOM05D004937 ORTHO05D006414 5.7e-57 225.7 325 41.2
SHI02217 Sapria himalayana HOM05D004937 ORTHO05D006414 7.2e-52 208.8 327 39.4
CSS0005056 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 3.3e-49 199.9 178 55.1
ClCG03G004640 Citrullus lanatus HOM05D004937 ORTHO05D006414 1.1e-47 194.9 194 51.0
Zm00001eb048580 Zea mays HOM05D004937 ORTHO05D006414 9.1e-47 191.8 176 52.3
CSS0029720 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 1.6e-43 181.0 339 38.1
Dinv13906 Davidia involucrata HOM05D004937 ORTHO05D006414 1.8e-42 177.6 278 39.2
CSS0048087 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 2.6e-41 173.7 266 41.0
QL05p072848 Quercus lobata HOM05D004937 ORTHO05D006414 1.5e-36 157.9 135 54.8
Cre06.g305050 Chlamydomonas reinhardtii HOM05D004937 ORTHO05D006414 6.1e-35 152.5 281 35.6
BcaB08g37427 Brassica carinata HOM05D004937 ORTHO05D006414 3.4e-33 146.7 176 44.3
MCO11G820 Micromonas commoda HOM05D004937 ORTHO05D006414 1.4e-31 141.4 296 32.4
BcaB08g37425 Brassica carinata HOM05D004937 ORTHO05D006414 1.2e-30 138.3 133 50.4
Psat6g178560 Pisum sativum HOM05D004937 ORTHO05D006414 2.0e-30 137.5 139 51.1
PRCOL_00004553 Prasinoderma coloniale HOM05D004937 ORTHO05D006414 1.9e-28 131.0 293 34.5
Dinv13905 Davidia involucrata HOM05D004937 ORTHO05D006414 4.2e-28 129.8 100 60.0
Cre06.g305250 Chlamydomonas reinhardtii HOM05D004937 ORTHO05D006414 1.7e-21 107.8 281 30.2
AagrBONN_evm.TU.Sc2ySwM_368.2061 Anthoceros agrestis HOM05D004937 ORTHO05D006414 3.9e-21 106.7 119 44.5
Mapoly0074s0008 Marchantia polymorpha HOM05D004937 ORTHO05D006414 1.6e-19 101.3 255 29.4
Lj2C267G4 Lonicera japonica HOM05D004937 ORTHO05D006414 2.1e-19 100.9 98 50.0
BcaB08g37428 Brassica carinata HOM05D004937 ORTHO05D006414 6.8e-18 95.9 78 57.7
Dinv13904 Davidia involucrata HOM05D004937 ORTHO05D006414 1.7e-16 91.3 73 58.9
PRCOL_00006577 Prasinoderma coloniale HOM05D004937 ORTHO05D006414 4.9e-16 89.7 295 27.1
ClCG03G004650 Citrullus lanatus HOM05D000020 ORTHO05D000904 6.4e-16 89.4 91 45.1
Os07g0510800 Oryza sativa ssp. japonica HOM05D004937 ORTHO05D006414 4.4e-09 66.6 64 53.1
Os10g0401100 Oryza sativa ssp. japonica HOM05D004937 ORTHO05D006414 7.5e-09 65.9 54 51.9
PSO832G4260 Papaver somniferum HOM05D004937 ORTHO05D002819 2.1e-06 57.8 61 45.9
Dinv30719 Davidia involucrata HOM05D004937 ORTHO05D006414 3.5e-06 57.0 97 37.1


User provided reference genes

Program Settings