Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03722 Aquilegia oxysepala HOM05D003991 ORTHO05D004883 0.0e+00 1494.6 847 100.0
TAR622G0714 Trochodendron aralioides HOM05D003991 ORTHO05D004883 2.8e-309 1065.1 779 73.8
PSO782G2666 Papaver somniferum HOM05D003991 ORTHO05D004883 2.9e-306 1055.0 778 73.0
TAR374G0063 Trochodendron aralioides HOM05D003991 ORTHO05D004883 6.5e-306 1053.9 778 72.9
PSO063G1675 Papaver somniferum HOM05D003991 ORTHO05D004883 8.6e-306 1053.5 779 73.6
Nn4g23516 Nelumbo nucifera HOM05D003991 ORTHO05D004883 1.8e-300 1035.8 779 72.4
MBI17_g07944_MAGBIO Magnolia biondii HOM05D003991 ORTHO05D004883 3.1e-300 1035.0 779 72.1
Cpa.g.sc541.1 Carica papaya HOM05D003991 ORTHO05D004883 8.9e-287 990.3 777 69.2
COL.COLO4_10252 Corchorus olitorius HOM05D003991 ORTHO05D004883 3.4e-286 988.4 781 70.8
Duzib138G0045 Durio zibethinus HOM05D003991 ORTHO05D004883 6.4e-285 984.2 781 70.7
TWI34G0665 Tripterygium wilfordii HOM05D003991 ORTHO05D004883 6.4e-285 984.2 796 66.8
Ciclev10011098m.g Citrus clementina HOM05D003991 ORTHO05D004883 2.4e-284 982.2 794 67.5
TWI32G1311 Tripterygium wilfordii HOM05D003991 ORTHO05D004883 8.6e-282 973.8 800 66.4
CANSAT64G1645 Cannabis sativa HOM05D003991 ORTHO05D004883 3.3e-281 971.8 797 67.1
Gorai.001G207000 Gossypium raimondii HOM05D003991 ORTHO05D004883 3.3e-281 971.8 784 68.4
Hma1.2p1_1837F.1_g304750 Hydrangea macrophylla HOM05D003991 ORTHO05D004883 6.2e-280 967.6 778 68.0
Lj4A124G55 Lonicera japonica HOM05D003991 ORTHO05D004883 8.1e-280 967.2 779 68.0
Eucgr.I02064 Eucalyptus grandis HOM05D003991 ORTHO05D004883 7.5e-278 960.7 782 67.1
Prupe.3G248800 Prunus persica HOM05D003991 ORTHO05D004883 7.5e-278 960.7 779 67.4
Potri.017G100300 Populus trichocarpa HOM05D003991 ORTHO05D004883 6.4e-277 957.6 780 66.9
CSS0001564 Camellia sinensis var. sinensis HOM05D003991 ORTHO05D004883 2.1e-275 952.6 781 69.1
Potri.004G114600 Populus trichocarpa HOM05D003991 ORTHO05D004883 2.3e-274 949.1 780 66.0
Duzib133G0226 Durio zibethinus HOM05D003991 ORTHO05D004883 3.9e-274 948.3 782 68.0
MD17G1065900 Malus domestica HOM05D003991 ORTHO05D004883 5.1e-274 948.0 779 66.9
Rhsim08G0077400 Rhododendron simsii HOM05D003991 ORTHO05D004883 8.6e-274 947.2 814 66.6
Cfa007697 Carpinus fangiana HOM05D003991 ORTHO05D004883 2.5e-273 945.7 792 68.8
Manes.02G059600 Manihot esculenta HOM05D003991 ORTHO05D004883 1.6e-272 943.0 779 65.9
Manes.01G103600 Manihot esculenta HOM05D003991 ORTHO05D004883 2.8e-272 942.2 779 65.5
MD09G1074500 Malus domestica HOM05D003991 ORTHO05D004883 1.8e-271 939.5 777 66.3
Atru.chr8.642 Acer truncatum HOM05D003991 ORTHO05D004883 2.4e-271 939.1 798 65.5
CiPaw.03G082800 Carya illinoinensis HOM05D003991 ORTHO05D004883 6.8e-271 937.6 742 68.1
ATR0605G126 Amborella trichopoda HOM05D003991 ORTHO05D004883 2.0e-270 936.0 797 63.9
Cc07_g04500 Coffea canephora HOM05D003991 ORTHO05D004883 2.0e-270 936.0 782 67.8
SGA_v2.0_scaffold148G36448 Striga asiatica HOM05D003991 ORTHO05D004883 2.2e-269 932.6 779 65.3
DCAR_011017 Daucus carota HOM05D003991 ORTHO05D004883 2.9e-269 932.2 785 65.7
vmacro18126 Vaccinium macrocarpon HOM05D003991 ORTHO05D004883 2.9e-269 932.2 835 62.5
Ca_06908_v3 Cicer arietinum L. HOM05D003991 ORTHO05D004883 4.9e-269 931.4 774 65.5
TPR.G23393 Trifolium pratense HOM05D003991 ORTHO05D004883 1.2e-267 926.8 779 65.0
RcHm_v2.0_Chr2g0164851 Rosa chinensis HOM05D003991 ORTHO05D004883 2.1e-267 926.0 782 65.2
Lalb_Chr10g0092711 Lupinus albus HOM05D003991 ORTHO05D004883 6.0e-267 924.5 781 66.6
FAN05G5440 Fragaria x ananassa HOM05D003991 ORTHO05D004883 3.0e-266 922.2 796 64.4
MSTRG.2973 Avicennia marina HOM05D003991 ORTHO05D004883 8.7e-266 920.6 793 64.9
MELO3C026296.2 Cucumis melo HOM05D003991 ORTHO05D004883 4.3e-265 918.3 783 64.2
FvH4_6g46350 Fragaria vesca HOM05D003991 ORTHO05D004883 5.6e-265 917.9 779 64.8
FAN09G2010 Fragaria x ananassa HOM05D003991 ORTHO05D004883 9.6e-265 917.1 779 64.8
Nitab4.5_0000154g0150 Nicotiana tabacum HOM05D003991 ORTHO05D004883 1.2e-264 916.8 776 64.8
SalBow1G2342 Salvia bowleyana HOM05D003991 ORTHO05D004883 4.7e-264 914.8 792 64.8
AL7G51550 Arabidopsis lyrata HOM05D003991 ORTHO05D004883 8.1e-264 914.1 778 63.8
Lj1g0022443 Lotus japonicus HOM05D003991 ORTHO05D004883 8.1e-264 914.1 779 65.1
Carub.0007s3697 Capsella rubella HOM05D003991 ORTHO05D004883 1.1e-263 913.7 778 64.0
AT5G38880 Arabidopsis thaliana HOM05D003991 ORTHO05D004883 4.0e-263 911.8 778 63.6
Haze_14380 Corylus avellana HOM05D003991 ORTHO05D004883 4.0e-263 911.8 866 61.0
Sabra17G0086400 Salix brachista HOM05D003991 ORTHO05D004883 5.2e-263 911.4 777 64.5
GSVIVG01036544001 Vitis vinifera HOM05D003991 ORTHO05D004883 5.2e-263 911.4 631 77.0
Peaxi162Scf01002g00121 Petunia axillaris HOM05D003991 ORTHO05D004883 6.9e-263 911.0 777 64.0
Lsat_1_v5_gn_3_96860 Lactuca sativa HOM05D003991 ORTHO05D004883 2.0e-262 909.4 793 62.8
Hund13674 Selenicereus undatus HOM05D003991 ORTHO05D004883 2.0e-262 909.4 776 63.9
CsaV3_4G010070 Cucumis sativus L. HOM05D003991 ORTHO05D004883 5.8e-262 907.9 785 64.7
Phvul.008G026400 Phaseolus vulgaris HOM05D003991 ORTHO05D004883 5.8e-262 907.9 781 63.8
Psat3g203280 Pisum sativum HOM05D003991 ORTHO05D004883 2.2e-261 906.0 779 63.3
FAN14G3680 Fragaria x ananassa HOM05D003991 ORTHO05D004883 2.9e-261 905.6 793 63.4
Glyma.08G251400 Glycine max HOM05D003991 ORTHO05D004883 2.9e-261 905.6 778 64.9
VMungo1383G3466 Vigna mungo HOM05D003991 ORTHO05D004883 4.9e-261 904.8 777 64.0
Glyma.18G274100 Glycine max HOM05D003991 ORTHO05D004883 8.4e-261 904.0 786 64.5
Sopen03g010790 Solanum pennellii HOM05D003991 ORTHO05D004883 8.4e-261 904.0 781 63.3
Medtr7g016900 Medicago truncatula HOM05D003991 ORTHO05D004883 1.9e-260 902.9 776 64.4
Sed0026923 Sechium edule HOM05D003991 ORTHO05D004883 1.9e-260 902.9 779 64.4
Sp2g18130 Schrenkiella parvula HOM05D003991 ORTHO05D004883 5.4e-260 901.4 779 63.4
CAN.G427.3 Capsicum annuum HOM05D003991 ORTHO05D004883 2.1e-259 899.4 783 63.6
Solyc03g046590.3 Solanum lycopersicum HOM05D003991 ORTHO05D004883 3.5e-259 898.7 781 64.4
Aa31LG2G3750 Aethionema arabicum HOM05D003991 ORTHO05D004883 6.6e-258 894.4 775 62.6
Thhalv10003675m.g Eutrema salsugineum HOM05D003991 ORTHO05D004883 9.6e-257 890.6 779 62.9
PGR004G0075 Punica granatum HOM05D003991 ORTHO05D004883 1.6e-256 889.8 778 63.0
BcaC06g30850 Brassica carinata HOM05D003991 ORTHO05D004883 2.1e-256 889.4 780 62.9
FAN02G3988 Fragaria x ananassa HOM05D003991 ORTHO05D004883 2.1e-256 889.4 793 62.5
A06p39740 Brassica napus HOM05D003991 ORTHO05D004883 3.6e-256 888.6 779 62.3
BraA06t26889Z Brassica rapa HOM05D003991 ORTHO05D004883 3.6e-256 888.6 779 62.3
THA.LOC104822745 Tarenaya hassleriana HOM05D003991 ORTHO05D004883 3.6e-256 888.6 789 63.0
HanXRQChr02g0043871 Helianthus annuus HOM05D003991 ORTHO05D004883 8.1e-256 887.5 777 62.4
BcaC06g33715 Brassica carinata HOM05D003991 ORTHO05D004883 3.1e-255 885.6 779 62.4
Thecc.04G106400 Theobroma cacao HOM05D003991 ORTHO05D004883 6.9e-255 884.4 587 78.7
C07p38530 Brassica napus HOM05D003991 ORTHO05D004883 1.2e-254 883.6 779 62.4
BolC7t44375H Brassica oleracea HOM05D003991 ORTHO05D004883 1.2e-254 883.6 779 62.4
EL10Ac2g04440 Beta vulgaris HOM05D003991 ORTHO05D004883 2.6e-254 882.5 785 62.5
CDE06G2000 Ceratophyllum demersum HOM05D003991 ORTHO05D004883 2.6e-254 882.5 781 63.4
Thhalv10027646m.g Eutrema salsugineum HOM05D003991 ORTHO05D004883 1.1e-252 877.1 774 60.9
ClCG07G016050 Citrullus lanatus HOM05D003991 ORTHO05D004883 1.4e-252 876.7 827 60.0
arahy.Tifrunner.gnm1.ann1.YA99EJ Arachis hypogaea HOM05D003991 ORTHO05D004883 5.4e-252 874.8 798 61.3
ECA246G2054 Erigeron canadensis HOM05D003991 ORTHO05D004883 7.1e-252 874.4 776 65.7
Migut.O00382 Erythranthe guttata HOM05D003991 ORTHO05D004883 8.7e-250 867.5 780 61.3
Gohir.A07G179600 Gossypium hirsutum HOM05D003991 ORTHO05D004883 2.5e-249 865.9 587 77.7
Gohir.D07G186400 Gossypium hirsutum HOM05D003991 ORTHO05D004883 2.5e-249 865.9 587 77.5
arahy.Tifrunner.gnm1.ann1.T6I3L8 Arachis hypogaea HOM05D003991 ORTHO05D004883 5.6e-249 864.8 808 61.3
AUR62009479 Chenopodium quinoa HOM05D003991 ORTHO05D004883 3.7e-248 862.1 777 61.5
AUR62023158 Chenopodium quinoa HOM05D003991 ORTHO05D004883 5.8e-246 854.7 777 61.3
Ah.16g101030 Amaranthus hybridus HOM05D003991 ORTHO05D004883 3.8e-245 852.0 777 62.9
SEGI_18103 Sequoiadendron giganteum HOM05D003991 ORTHO05D004883 3.7e-240 835.5 784 58.4
CiPaw.04G052100 Carya illinoinensis HOM05D003991 ORTHO05D004883 1.1e-239 833.9 781 62.7
A09p04180 Brassica napus HOM05D003991 ORTHO05D004883 8.4e-237 824.3 779 61.4
HPP92_025879 Vanilla planifolia HOM05D003991 ORTHO05D004883 2.5e-236 822.8 778 59.4
C09p04400 Brassica napus HOM05D003991 ORTHO05D004883 5.5e-236 821.6 780 59.6
BraA09t36055Z Brassica rapa HOM05D003991 ORTHO05D004883 7.9e-235 817.8 778 58.9
Nitab4.5_0001434g0090 Nicotiana tabacum HOM05D003991 ORTHO05D004883 7.4e-233 811.2 783 59.8
Oeu007082.1 Olea europaea HOM05D003991 ORTHO05D004883 3.7e-232 808.9 717 62.6
BolC9t53370H Brassica oleracea HOM05D003991 ORTHO05D004883 9.0e-231 804.3 778 59.0
unitig_748.g8415 Utricularia gibba HOM05D003991 ORTHO05D004883 2.6e-230 802.7 792 57.2
CSS0050035 Camellia sinensis var. sinensis HOM05D003991 ORTHO05D004883 1.8e-226 790.0 731 64.2
Lsat_1_v5_gn_2_90201 Lactuca sativa HOM05D003991 ORTHO05D004883 7.4e-225 784.6 792 57.4
BcaC04g23813 Brassica carinata HOM05D003991 ORTHO05D004883 1.7e-216 756.9 780 56.5
HanXRQChr07g0200011 Helianthus annuus HOM05D003991 ORTHO05D004883 1.4e-210 737.3 797 53.5
ECA238G0416 Erigeron canadensis HOM05D003991 ORTHO05D004883 2.6e-206 723.0 780 54.7
Sc11g0008820 Simmondsia chinensis HOM05D003991 ORTHO05D004883 5.0e-205 718.8 666 62.0
Actinidia26270 Actinidia chinensis HOM05D003991 ORTHO05D004883 7.2e-188 661.8 480 74.0
BcaC04g23825 Brassica carinata HOM05D003991 ORTHO05D004883 1.2e-187 661.0 589 62.1
SMO147G0301 Selaginella moellendorffii HOM05D003991 ORTHO05D004883 3.5e-182 642.9 781 49.2
Pp3c9_9760 Physcomitrium patens HOM05D003991 ORTHO05D004883 3.5e-174 616.3 812 45.4
Pp3c9_9870 Physcomitrium patens HOM05D003991 ORTHO05D004883 3.5e-174 616.3 812 45.4
MBI17_g36999_MAGBIO Magnolia biondii HOM05D003991 ORTHO05D004883 2.3e-173 613.6 514 67.3
Mapoly0016s0130 Marchantia polymorpha HOM05D003991 ORTHO05D004883 2.1e-166 590.5 836 43.8
Zm00001eb099080 Zea mays HOM05D003991 ORTHO05D004883 3.2e-159 566.6 614 55.2
Pp3c15_7610 Physcomitrium patens HOM05D003991 ORTHO05D004883 2.7e-158 563.5 813 43.5
Zm00001eb311840 Zea mays HOM05D003991 ORTHO05D004883 9.2e-151 538.5 427 67.0
Pp3c10_8720 Physcomitrium patens HOM05D003991 ORTHO05D004883 6.9e-146 522.3 611 49.3
Os09g0386600 Oryza sativa ssp. japonica HOM05D003991 ORTHO05D004883 1.3e-141 508.1 402 67.2
AagrBONN_evm.TU.Sc2ySwM_344.1887 Anthoceros agrestis HOM05D003991 ORTHO05D004883 4.3e-140 503.1 795 41.3
ECA285G0010 Erigeron canadensis HOM05D003991 ORTHO05D004883 1.5e-137 494.6 578 51.6
CARHR263670 Cardamine hirsuta HOM05D003991 ORTHO05D004883 3.6e-110 403.7 425 53.2
BcaB04g19523 Brassica carinata HOM05D003991 ORTHO05D004883 5.0e-96 356.7 417 50.8
BcaC04g23815 Brassica carinata HOM05D003991 ORTHO05D004883 3.0e-77 294.3 587 38.7
Dinv33866 Davidia involucrata HOM05D003991 ORTHO05D004883 1.3e-75 288.9 216 73.1
Aa31LG1G6630 Aethionema arabicum HOM05D003991 ORTHO05D004883 2.3e-72 278.1 338 50.9
CBR_g36314 Chara braunii HOM05D003991 ORTHO05D004883 9.8e-68 262.7 730 30.8
Sp7g03030 Schrenkiella parvula HOM05D003991 ORTHO05D004883 4.7e-62 243.8 236 56.4
SMO147G0173 Selaginella moellendorffii HOM05D003991 ORTHO05D004883 1.6e-57 228.8 456 39.3
BcaC04g23820 Brassica carinata HOM05D003991 ORTHO05D004883 5.2e-53 213.8 501 34.5
arahy.Tifrunner.gnm1.ann1.VU455X Arachis hypogaea HOM05D003991 ORTHO05D004883 1.0e-48 199.5 169 66.9
arahy.Tifrunner.gnm1.ann1.994D9I Arachis hypogaea HOM05D003991 ORTHO05D004883 2.1e-46 191.8 159 67.9
arahy.Tifrunner.gnm1.ann1.52AFQE Arachis hypogaea HOM05D003991 ORTHO05D004883 8.1e-46 189.9 159 67.3
arahy.Tifrunner.gnm1.ann1.YE0A4T Arachis hypogaea HOM05D003991 ORTHO05D004883 8.1e-46 189.9 159 67.3
Dinv33867 Davidia involucrata HOM05D003991 ORTHO05D004883 9.2e-42 176.4 171 59.6
HPP92_006579 Vanilla planifolia HOM05D003991 ORTHO05D004883 8.6e-40 169.9 205 50.7
Dinv33865 Davidia involucrata HOM05D003991 ORTHO05D004883 8.9e-37 159.8 113 73.5
HPP92_006533 Vanilla planifolia HOM05D003991 ORTHO05D004883 4.6e-33 147.5 380 31.8
SMO147G0397 Selaginella moellendorffii HOM05D003991 ORTHO05D050858 2.1e-30 138.7 142 52.1
MD09G1075300 Malus domestica HOM05D003991 ORTHO05D004883 1.4e-26 125.9 77 77.9
HPP92_026595 Vanilla planifolia HOM05D003991 ORTHO05D004883 5.4e-26 124.0 130 53.8
arahy.Tifrunner.gnm1.ann1.Q8CATI Arachis hypogaea HOM05D003991 ORTHO05D004883 2.5e-23 115.2 75 82.7
BcaC04g23819 Brassica carinata HOM05D003991 ORTHO05D004883 7.6e-20 103.6 176 40.9
HPP92_028205 Vanilla planifolia HOM05D003991 ORTHO05D004883 4.9e-19 100.9 146 41.8
HPP92_026934 Vanilla planifolia HOM05D003881 ORTHO05D004343 8.4e-19 100.1 85 58.8
BcaB04g19526 Brassica carinata HOM05D003991 ORTHO05D004883 7.1e-18 97.1 78 61.5
Cfa002005 Carpinus fangiana HOM05D003991 ORTHO05D009743 4.6e-17 94.4 56 85.7
HPP92_026824 Vanilla planifolia HOM05D003991 ORTHO05D004883 2.3e-16 92.0 108 48.1
HPP92_028494 Vanilla planifolia HOM05D003991 ORTHO05D004883 1.9e-15 89.0 135 45.2
Cfa020174 Carpinus fangiana HOM05D003991 ORTHO05D004883 7.6e-12 77.0 46 76.1
Sc11g0008830 Simmondsia chinensis HOM05D003991 ORTHO05D004883 1.0e-11 76.6 50 70.0
Os11g0189900 Oryza sativa ssp. japonica HOM05D003991 ORTHO05D298446 4.9e-11 74.3 77 53.2
CSS0000762 Camellia sinensis var. sinensis HOM05D003991 ORTHO05D004883 8.4e-11 73.6 45 68.9
CSS0038698 Camellia sinensis var. sinensis HOM05D003991 ORTHO05D004883 8.4e-11 73.6 45 68.9
SEGI_36661 Sequoiadendron giganteum HOM05D001164 ORTHO05D018381 2.5e-10 72.0 77 50.6
HPP92_027976 Vanilla planifolia HOM05D003991 ORTHO05D004883 1.6e-09 69.3 263 28.1
Dinv33864 Davidia involucrata HOM05D003991 ORTHO05D004883 2.1e-09 68.9 89 44.9
HPP92_027770 Vanilla planifolia HOM05D003991 ORTHO05D432268 2.1e-09 68.9 76 51.3
QL05p023649 Quercus lobata HOM05D003991 ORTHO05D004883 3.5e-09 68.2 52 75.0
QL01p030546 Quercus lobata HOM05D003991 ORTHO05D004883 7.9e-09 67.0 52 73.1
QL05p049573 Quercus lobata HOM05D003991 ORTHO05D004883 3.3e-07 61.6 51 68.6
QL05p049558 Quercus lobata HOM05D003991 ORTHO05D004883 7.4e-07 60.5 48 72.9


User provided reference genes

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