Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03713 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 1.9e-59 232.3 115 100.0
Aqoxy3G03714 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 7.9e-45 183.7 115 73.0
Aqoxy3G03715 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 1.6e-42 176.0 113 72.6
PSO675G6317 Papaver somniferum HOM05D004605 ORTHO05D005804 1.1e-41 173.3 114 69.3
Gohir.D07G186600 Gossypium hirsutum HOM05D004605 ORTHO05D005804 1.4e-41 172.9 111 74.8
Gorai.001G207200 Gossypium raimondii HOM05D004605 ORTHO05D005804 1.4e-41 172.9 111 74.8
TAR629G2115 Trochodendron aralioides HOM05D004605 ORTHO05D005804 2.4e-41 172.2 115 73.0
Gohir.A07G179800 Gossypium hirsutum HOM05D004605 ORTHO05D005804 3.1e-41 171.8 111 73.9
PSO732G0027 Papaver somniferum HOM05D004605 ORTHO05D005804 3.1e-41 171.8 114 68.4
COL.COLO4_10258 Corchorus olitorius HOM05D004605 ORTHO05D005804 1.2e-40 169.9 110 71.8
Potri.017G100000 Populus trichocarpa HOM05D004605 ORTHO05D005804 1.2e-40 169.9 111 72.1
GSVIVG01036547001 Vitis vinifera HOM05D004605 ORTHO05D005804 2.0e-40 169.1 110 72.7
Actinidia26268 Actinidia chinensis HOM05D004605 ORTHO05D005804 4.5e-40 167.9 110 71.8
Hma1.2p1_0474F.1_g160750 Hydrangea macrophylla HOM05D004605 ORTHO05D005804 4.5e-40 167.9 115 71.3
Oeu031839.1 Olea europaea HOM05D004605 ORTHO05D005804 5.8e-40 167.5 110 71.8
Manes.02G059400 Manihot esculenta HOM05D004605 ORTHO05D005804 7.6e-40 167.2 110 72.7
Atru.chr8.648 Acer truncatum HOM05D004605 ORTHO05D005804 9.9e-40 166.8 107 74.8
Ciclev10012619m.g Citrus clementina HOM05D004605 ORTHO05D005804 9.9e-40 166.8 110 70.0
SGA_v2.0_scaffold148G36445 Striga asiatica HOM05D004605 ORTHO05D005804 1.3e-39 166.4 110 70.0
Peaxi162Scf00020g10235 Petunia axillaris HOM05D004605 ORTHO05D005804 1.7e-39 166.0 110 68.2
Rhsim08G0077200 Rhododendron simsii HOM05D004605 ORTHO05D005804 2.9e-39 165.2 114 71.9
Aqoxy3G03716 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 3.8e-39 164.9 113 66.4
Lju361C6G5 Lonicera japonica HOM05D004605 ORTHO05D005804 3.8e-39 164.9 115 69.6
Sabra17G0086200 Salix brachista HOM05D004605 ORTHO05D005804 3.8e-39 164.9 111 69.4
Duzib133G0947 Durio zibethinus HOM05D004605 ORTHO05D005804 8.4e-39 163.7 110 70.0
Cfa007695 Carpinus fangiana HOM05D004605 ORTHO05D005804 1.1e-38 163.3 107 72.0
Haze_14382 Corylus avellana HOM05D004605 ORTHO05D005804 1.4e-38 162.9 107 71.0
DCAR_021425 Daucus carota HOM05D004605 ORTHO05D005804 1.4e-38 162.9 115 69.6
Cpa.g.sc14.228 Carica papaya HOM05D004605 ORTHO05D005804 1.9e-38 162.5 107 72.0
Duzib138G1714 Durio zibethinus HOM05D004605 ORTHO05D005804 2.4e-38 162.2 111 68.5
Migut.H00587 Erythranthe guttata HOM05D004605 ORTHO05D005804 2.4e-38 162.2 112 69.6
Thecc.04G106100 Theobroma cacao HOM05D004605 ORTHO05D005804 3.2e-38 161.8 111 68.5
Lsat_1_v5_gn_2_90241 Lactuca sativa HOM05D004605 ORTHO05D005804 7.1e-38 160.6 110 67.3
CSS0024904 Camellia sinensis var. sinensis HOM05D004605 ORTHO05D005804 9.3e-38 160.2 110 70.0
CiPaw.03G083100 Carya illinoinensis HOM05D004605 ORTHO05D005804 9.3e-38 160.2 110 69.1
Manes.01G103400 Manihot esculenta HOM05D004605 ORTHO05D005804 2.1e-37 159.1 110 67.3
Nitab4.5_0001339g0150 Nicotiana tabacum HOM05D004605 ORTHO05D005804 2.1e-37 159.1 110 65.5
Nitab4.5_0007530g0010 Nicotiana tabacum HOM05D004605 ORTHO05D005804 2.1e-37 159.1 110 65.5
SalBow1G3999 Salvia bowleyana HOM05D004605 ORTHO05D005804 2.7e-37 158.7 110 66.4
Solyc02g089230.3 Solanum lycopersicum HOM05D004605 ORTHO05D005804 3.5e-37 158.3 110 64.5
VMungo1383G2960 Vigna mungo HOM05D004605 ORTHO05D005804 3.5e-37 158.3 109 68.8
Hund16233 Selenicereus undatus HOM05D004605 ORTHO05D005804 4.6e-37 157.9 111 66.7
Sopen02g034020 Solanum pennellii HOM05D004605 ORTHO05D005804 4.6e-37 157.9 110 64.5
TWI60G1007 Tripterygium wilfordii HOM05D004605 ORTHO05D005804 4.6e-37 157.9 111 65.8
CiPaw.03G083000 Carya illinoinensis HOM05D004605 ORTHO05D005804 7.9e-37 157.1 110 65.5
HanXRQChr14g0452481 Helianthus annuus HOM05D004605 ORTHO05D005804 7.9e-37 157.1 110 67.3
Sed0020846 Sechium edule HOM05D004605 ORTHO05D005804 7.9e-37 157.1 111 68.5
Eucgr.I02062 Eucalyptus grandis HOM05D004605 ORTHO05D005804 1.3e-36 156.4 110 65.5
MELO3C026298.2 Cucumis melo HOM05D004605 ORTHO05D005804 1.8e-36 156.0 111 67.6
Glyma.18G273900 Glycine max HOM05D004605 ORTHO05D005804 2.3e-36 155.6 109 67.0
Phvul.008G027000 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 2.3e-36 155.6 109 67.0
Medtr7g016650 Medicago truncatula HOM05D004605 ORTHO05D005804 3.9e-36 154.8 109 67.0
Phvul.008G026800 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 3.9e-36 154.8 109 67.0
PGSC0003DMG400001379 Solanum tuberosum HOM05D004605 ORTHO05D005804 3.9e-36 154.8 110 62.7
ClCG07G016040 Citrullus lanatus HOM05D004605 ORTHO05D005804 5.1e-36 154.5 111 66.7
CsaV3_4G010080 Cucumis sativus L. HOM05D004605 ORTHO05D005804 5.1e-36 154.5 111 66.7
CAN.G497.71 Capsicum annuum HOM05D004605 ORTHO05D005804 1.1e-35 153.3 110 63.6
arahy.Tifrunner.gnm1.ann1.M6S7AL Arachis hypogaea HOM05D004605 ORTHO05D005804 1.5e-35 152.9 109 66.1
ECA238G2860 Erigeron canadensis HOM05D004605 ORTHO05D005804 1.5e-35 152.9 111 64.9
Lj1g0025970 Lotus japonicus HOM05D004605 ORTHO05D005804 1.9e-35 152.5 109 67.0
Lalb_Chr10g0092731 Lupinus albus HOM05D004605 ORTHO05D005804 1.9e-35 152.5 109 66.1
QL02p065873 Quercus lobata HOM05D004605 ORTHO05D005804 1.9e-35 152.5 107 66.4
TPR.G23408 Trifolium pratense HOM05D004605 ORTHO05D005804 2.5e-35 152.1 109 67.0
MD17G1065700 Malus domestica HOM05D004605 ORTHO05D005804 3.3e-35 151.8 112 66.1
Phvul.008G027600 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 4.3e-35 151.4 109 66.1
arahy.Tifrunner.gnm1.ann1.90K79T Arachis hypogaea HOM05D004605 ORTHO05D005804 5.6e-35 151.0 109 66.1
Aa31LG9G16810 Aethionema arabicum HOM05D004605 ORTHO05D005804 7.4e-35 150.6 110 63.6
Prupe.3G249100 Prunus persica HOM05D004605 ORTHO05D005804 7.4e-35 150.6 112 65.2
AUR62023160 Chenopodium quinoa HOM05D004605 ORTHO05D005804 9.6e-35 150.2 111 65.8
MD09G1074300 Malus domestica HOM05D004605 ORTHO05D005804 9.6e-35 150.2 112 65.2
THA.LOC104805526 Tarenaya hassleriana HOM05D004605 ORTHO05D005804 1.3e-34 149.8 109 65.1
MSTRG.15437 Avicennia marina HOM05D004605 ORTHO05D005804 2.1e-34 149.1 111 65.8
Glyma.08G251200 Glycine max HOM05D004605 ORTHO05D005804 2.1e-34 149.1 109 65.1
RcHm_v2.0_Chr2g0164921 Rosa chinensis HOM05D004605 ORTHO05D005804 2.8e-34 148.7 108 67.6
ATR0827G055 Amborella trichopoda HOM05D004605 ORTHO05D005804 3.7e-34 148.3 114 59.6
Zm00001eb049940 Zea mays HOM05D004605 ORTHO05D005804 4.8e-34 147.9 115 60.0
Zm00001eb219300 Zea mays HOM05D004605 ORTHO05D005804 4.8e-34 147.9 115 59.1
AUR62009481 Chenopodium quinoa HOM05D004605 ORTHO05D005804 1.1e-33 146.7 140 54.3
VMungo1383G3490 Vigna mungo HOM05D004605 ORTHO05D005804 4.0e-33 144.8 109 64.2
Ca_06902_v3 Cicer arietinum L. HOM05D004605 ORTHO05D005804 5.3e-33 144.4 109 62.4
AL7G51520 Arabidopsis lyrata HOM05D004605 ORTHO05D005804 1.2e-32 143.3 110 60.9
AT5G38900 Arabidopsis thaliana HOM05D004605 ORTHO05D005804 1.5e-32 142.9 110 60.9
Psat3g203400 Pisum sativum HOM05D004605 ORTHO05D005804 1.5e-32 142.9 110 60.9
CANSAT64G2231 Cannabis sativa HOM05D004605 ORTHO05D005804 2.0e-32 142.5 111 62.2
Carub.0007s3694 Capsella rubella HOM05D004605 ORTHO05D005804 3.4e-32 141.7 110 60.9
FvH4_6g46390 Fragaria vesca HOM05D004605 ORTHO05D005804 3.4e-32 141.7 108 63.0
MSTRG.15436 Avicennia marina HOM05D004605 ORTHO05D005804 4.5e-32 141.4 88 73.9
Thhalv10027927m.g Eutrema salsugineum HOM05D004605 ORTHO05D005804 4.5e-32 141.4 110 58.2
Os03g0598900 Oryza sativa ssp. japonica HOM05D004605 ORTHO05D005804 5.8e-32 141.0 112 58.9
C06p18440 Brassica napus HOM05D004605 ORTHO05D005804 7.6e-32 140.6 110 60.0
Sp7g03000 Schrenkiella parvula HOM05D004605 ORTHO05D005804 1.0e-31 140.2 110 59.1
BcaB02g07994 Brassica carinata HOM05D004605 ORTHO05D005804 1.7e-31 139.4 110 59.1
BraA07t29690Z Brassica rapa HOM05D004605 ORTHO05D005804 1.7e-31 139.4 110 59.1
EL10Ac2g04442 Beta vulgaris HOM05D004605 ORTHO05D005804 2.2e-31 139.0 111 61.3
A07p19860 Brassica napus HOM05D004605 ORTHO05D005804 2.2e-31 139.0 110 59.1
CDE10G0487 Ceratophyllum demersum HOM05D004605 ORTHO05D005804 2.2e-31 139.0 107 60.7
FAN05G4053 Fragaria x ananassa HOM05D004605 ORTHO05D005804 2.9e-31 138.7 116 57.8
BcaC08g44406 Brassica carinata HOM05D004605 ORTHO05D005804 3.8e-31 138.3 110 59.1
BolC6t37056H Brassica oleracea HOM05D004605 ORTHO05D005804 3.8e-31 138.3 110 59.1
Eucgr.B03744 Eucalyptus grandis HOM05D004605 ORTHO05D005804 1.2e-29 133.3 93 65.6
HPP92_012260 Vanilla planifolia HOM05D004605 ORTHO05D005804 1.6e-29 132.9 111 55.0
SMO223G0030 Selaginella moellendorffii HOM05D004605 ORTHO05D005804 2.1e-29 132.5 109 54.1
Eucgr.L00721 Eucalyptus grandis HOM05D004605 ORTHO05D005804 3.5e-29 131.7 93 64.5
CARHR263630 Cardamine hirsuta HOM05D004605 ORTHO05D005804 4.6e-29 131.3 110 57.3
Pp3c14_20450 Physcomitrium patens HOM05D004605 ORTHO05D005804 7.9e-29 130.6 107 53.3
Prupe.3G249000 Prunus persica HOM05D004605 ORTHO05D005804 7.9e-29 130.6 111 54.1
SalBow3G1842 Salvia bowleyana HOM05D004605 ORTHO05D005804 1.8e-28 129.4 95 63.2
arahy.Tifrunner.gnm1.ann1.XASR8W Arachis hypogaea HOM05D004605 ORTHO05D005804 8.7e-28 127.1 98 62.2
MBI16_g34534_MAGBIO Magnolia biondii HOM05D004605 ORTHO05D005804 8.7e-28 127.1 114 57.9
FvH4_6g46370 Fragaria vesca HOM05D004605 ORTHO05D005804 4.3e-27 124.8 111 55.0
Mapoly0001s0057 Marchantia polymorpha HOM05D004605 ORTHO05D005804 1.6e-26 122.9 111 46.8
FAN02G1482 Fragaria x ananassa HOM05D004605 ORTHO05D005804 4.1e-25 118.2 111 52.3
RcHm_v2.0_Chr2g0164911 Rosa chinensis HOM05D004605 ORTHO05D005804 4.1e-25 118.2 111 51.4
AagrBONN_evm.TU.Sc2ySwM_340.410 Anthoceros agrestis HOM05D004605 ORTHO05D005804 2.0e-24 115.9 113 46.9
FAN14G2038 Fragaria x ananassa HOM05D004605 ORTHO05D005804 4.5e-24 114.8 87 60.9
SEGI_21234 Sequoiadendron giganteum HOM05D004605 ORTHO05D005804 3.8e-23 111.7 112 43.8
FAN09G1153 Fragaria x ananassa HOM05D004605 ORTHO05D005804 7.2e-22 107.5 129 46.5
Nn4g23522 Nelumbo nucifera HOM05D004605 ORTHO05D005804 2.1e-21 105.9 75 68.0
Cc07_g04480 Coffea canephora HOM05D004605 ORTHO05D005804 1.0e-20 103.6 81 63.0
Sc10g0000600 Simmondsia chinensis HOM05D004605 ORTHO05D005804 1.8e-20 102.8 68 70.6
vmacro18128 Vaccinium macrocarpon HOM05D004605 ORTHO05D005804 9.7e-19 97.1 87 57.5
FAN02G3403 Fragaria x ananassa HOM05D004605 ORTHO05D005804 5.3e-17 91.3 66 65.2
AagrBONN_evm.TU.Sc2ySwM_340.409 Anthoceros agrestis HOM05D004605 ORTHO05D005804 3.8e-15 85.1 93 48.4
FAN09G3310 Fragaria x ananassa HOM05D004605 ORTHO05D005804 2.7e-13 79.0 66 54.5
Cre12.g553700 Chlamydomonas reinhardtii HOM05D004605 ORTHO05D005804 3.6e-13 78.6 111 36.0
FAN05G1095 Fragaria x ananassa HOM05D004605 ORTHO05D005804 1.0e-12 77.0 111 40.5
MCO08G262 Micromonas commoda HOM05D004605 ORTHO05D005804 1.5e-11 73.2 121 36.4
Cc07_g04470 Coffea canephora HOM05D004605 ORTHO05D005804 3.7e-10 68.6 39 74.4
AUR62024435 Chenopodium quinoa HOM05D004605 ORTHO05D005804 3.1e-09 65.5 39 71.8
HanXRQChr04g0116811 Helianthus annuus HOM05D004605 ORTHO05D005804 9.1e-09 63.9 40 70.0
QL02p053766 Quercus lobata HOM05D004605 ORTHO05D005804 2.0e-08 62.8 39 71.8
Eucgr.L00305 Eucalyptus grandis HOM05D004605 ORTHO05D005804 2.6e-08 62.4 39 66.7
HPP92_012204 Vanilla planifolia HOM05D004605 ORTHO05D005804 6.5e-07 57.8 86 36.0
Nn1g08579 Nelumbo nucifera HOM05D004605 ORTHO05D005804 1.9e-06 56.2 89 37.1
HPP92_012246 Vanilla planifolia HOM05D004605 ORTHO05D005804 4.2e-06 55.1 86 34.9
arahy.Tifrunner.gnm1.ann1.2EY802 Arachis hypogaea HOM05D004605 ORTHO05D005804 9.4e-06 53.9 47 51.1


User provided reference genes

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