Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03705 Aquilegia oxysepala HOM05D006848 ORTHO05D008445 3.1e-126 455.3 253 100.0
MBI01_g27616_MAGBIO Magnolia biondii HOM05D006848 ORTHO05D008445 4.3e-88 328.6 182 86.3
Eucgr.G03390 Eucalyptus grandis HOM05D006848 ORTHO05D008445 7.4e-88 327.8 198 81.3
Haze_03213 Corylus avellana HOM05D006848 ORTHO05D008445 1.1e-86 323.9 183 84.2
Hma1.2p1_0312F.1_g121500 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 3.1e-86 322.4 182 83.0
MD07G1008600 Malus domestica HOM05D006848 ORTHO05D008445 4.1e-86 322.0 189 83.6
Ca_14368_v3 Cicer arietinum L. HOM05D006848 ORTHO05D008445 5.3e-86 321.6 182 83.0
Ciclev10032624m.g Citrus clementina HOM05D006848 ORTHO05D008445 5.3e-86 321.6 201 77.1
PGSC0003DMG400006872 Solanum tuberosum HOM05D006848 ORTHO05D008445 9.1e-86 320.9 211 74.4
Atru.chr11.2648 Acer truncatum HOM05D006848 ORTHO05D008445 1.2e-85 320.5 174 86.8
CiPaw.13G004400 Carya illinoinensis HOM05D006848 ORTHO05D008445 1.2e-85 320.5 187 83.4
PGR031G3843 Punica granatum HOM05D006848 ORTHO05D008445 1.2e-85 320.5 182 84.6
Sabra09G0046200 Salix brachista HOM05D006848 ORTHO05D008445 1.5e-85 320.1 221 71.9
FvH4_7g00900 Fragaria vesca HOM05D006848 ORTHO05D008445 2.6e-85 319.3 188 81.4
Glyma.08G154300 Glycine max HOM05D006848 ORTHO05D008445 3.4e-85 318.9 199 76.9
VMungo1080G1360 Vigna mungo HOM05D006848 ORTHO05D008445 3.4e-85 318.9 199 76.9
CANSAT80G2127 Cannabis sativa HOM05D006848 ORTHO05D008445 4.5e-85 318.5 202 79.2
TPR.G12217 Trifolium pratense HOM05D006848 ORTHO05D008445 5.9e-85 318.2 197 78.7
EL10Ac2g03652 Beta vulgaris HOM05D006848 ORTHO05D008445 7.7e-85 317.8 202 79.2
Eucgr.H02489 Eucalyptus grandis HOM05D006848 ORTHO05D008445 7.7e-85 317.8 187 82.4
QL04p007215 Quercus lobata HOM05D006848 ORTHO05D008445 7.7e-85 317.8 186 82.3
TAR623G0094 Trochodendron aralioides HOM05D006848 ORTHO05D008445 1.0e-84 317.4 177 85.3
TAR623G0130 Trochodendron aralioides HOM05D006848 ORTHO05D008445 1.0e-84 317.4 177 85.3
Lalb_Chr01g0015361 Lupinus albus HOM05D006848 ORTHO05D008445 1.3e-84 317.0 204 76.0
Rhsim07G0054800 Rhododendron simsii HOM05D006848 ORTHO05D008445 5.0e-84 315.1 186 81.7
CAN.G170.111 Capsicum annuum HOM05D006848 ORTHO05D008445 6.5e-84 314.7 192 78.1
Medtr3g028150 Medicago truncatula HOM05D006848 ORTHO05D008445 1.1e-83 313.9 177 84.2
Nitab4.5_0002477g0050 Nicotiana tabacum HOM05D006848 ORTHO05D008445 1.4e-83 313.5 192 77.6
Potri.009G062500 Populus trichocarpa HOM05D006848 ORTHO05D008445 1.9e-83 313.2 196 77.6
Glyma.15G273300 Glycine max HOM05D006848 ORTHO05D008445 2.5e-83 312.8 199 76.4
Oeu036185.1 Olea europaea HOM05D006848 ORTHO05D008445 2.5e-83 312.8 185 81.6
CsaV3_7G031150 Cucumis sativus L. HOM05D006848 ORTHO05D008445 3.2e-83 312.4 205 72.2
Psat5g204320 Pisum sativum HOM05D006848 ORTHO05D008445 3.2e-83 312.4 170 84.7
ClCG09G004240 Citrullus lanatus HOM05D006848 ORTHO05D008445 1.2e-82 310.5 205 72.7
FAN10G1997 Fragaria x ananassa HOM05D006848 ORTHO05D008445 1.6e-82 310.1 192 79.7
Sed0006624 Sechium edule HOM05D006848 ORTHO05D008445 1.6e-82 310.1 198 74.2
DCAR_029663 Daucus carota HOM05D006848 ORTHO05D008445 2.1e-82 309.7 185 80.0
Thecc.01G412000 Theobroma cacao HOM05D006848 ORTHO05D008445 2.1e-82 309.7 204 74.5
Sc10g0000020 Simmondsia chinensis HOM05D006848 ORTHO05D008445 2.7e-82 309.3 183 80.3
MELO3C023542.2 Cucumis melo HOM05D006848 ORTHO05D008445 1.0e-81 307.4 188 76.1
Duzib138G1675 Durio zibethinus HOM05D006848 ORTHO05D008445 3.9e-81 305.4 200 75.5
Nitab4.5_0000634g0080 Nicotiana tabacum HOM05D006848 ORTHO05D008445 3.9e-81 305.4 224 69.6
vmacro13656 Vaccinium macrocarpon HOM05D006848 ORTHO05D008445 3.9e-81 305.4 178 83.1
TWI09G1547 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 6.7e-81 304.7 196 76.0
Gohir.D08G063100 Gossypium hirsutum HOM05D006848 ORTHO05D008445 1.1e-80 303.9 198 74.7
Gorai.004G065300 Gossypium raimondii HOM05D006848 ORTHO05D008445 1.1e-80 303.9 198 74.7
MD02G1313800 Malus domestica HOM05D006848 ORTHO05D008445 1.1e-80 303.9 189 79.4
Peaxi162Scf00428g00063 Petunia axillaris HOM05D006848 ORTHO05D008445 1.5e-80 303.5 192 76.6
Migut.B01319 Erythranthe guttata HOM05D006848 ORTHO05D008445 2.0e-80 303.1 187 76.5
Gohir.A08G053600 Gossypium hirsutum HOM05D006848 ORTHO05D008445 2.0e-80 303.1 172 83.1
Sopen01g034120 Solanum pennellii HOM05D006848 ORTHO05D008445 2.0e-80 303.1 211 71.1
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 3.3e-80 302.4 189 77.2
Solyc01g087040.2 Solanum lycopersicum HOM05D006848 ORTHO05D008445 4.4e-80 302.0 211 70.6
Cpa.g.sc386.5 Carica papaya HOM05D006848 ORTHO05D008445 5.7e-80 301.6 216 71.3
Nn113s43373 Nelumbo nucifera HOM05D006848 ORTHO05D008445 5.7e-80 301.6 179 81.6
Nn2g15435 Nelumbo nucifera HOM05D006848 ORTHO05D008445 5.7e-80 301.6 179 81.6
PSO384G0049 Papaver somniferum HOM05D006848 ORTHO05D008445 5.7e-80 301.6 209 73.7
TWI53G1868 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 7.4e-80 301.2 200 74.0
COL.COLO4_23924 Corchorus olitorius HOM05D006848 ORTHO05D008445 9.7e-80 300.8 199 74.4
Lj7A569T67 Lonicera japonica HOM05D006848 ORTHO05D008445 9.7e-80 300.8 170 82.4
Phvul.005G020200 Phaseolus vulgaris HOM05D006848 ORTHO05D008445 9.7e-80 300.8 199 73.4
THA.LOC104819691 Tarenaya hassleriana HOM05D006848 ORTHO05D008445 2.2e-79 299.7 195 74.9
HanXRQChr01g0016151 Helianthus annuus HOM05D006848 ORTHO05D008445 4.8e-79 298.5 200 75.0
PSO135G0340 Papaver somniferum HOM05D006848 ORTHO05D008445 8.2e-79 297.7 241 66.4
Peaxi162Scf00347g00071 Petunia axillaris HOM05D006848 ORTHO05D008445 8.2e-79 297.7 192 76.6
Cc02_g27800 Coffea canephora HOM05D006848 ORTHO05D008445 1.8e-78 296.6 172 82.0
Prupe.2G012000 Prunus persica HOM05D006848 ORTHO05D008445 3.1e-78 295.8 184 78.8
Carub.0005s3015 Capsella rubella HOM05D006848 ORTHO05D008445 4.1e-78 295.4 198 72.2
Lsat_1_v5_gn_1_107841 Lactuca sativa HOM05D006848 ORTHO05D008445 1.2e-77 293.9 171 83.0
BcaC01g04883 Brassica carinata HOM05D006848 ORTHO05D008445 3.4e-77 292.4 196 72.4
A03p27190 Brassica napus HOM05D006848 ORTHO05D008445 3.4e-77 292.4 205 71.2
BraA03t11932Z Brassica rapa HOM05D006848 ORTHO05D008445 3.4e-77 292.4 205 71.2
CARHR291430 Cardamine hirsuta HOM05D006848 ORTHO05D008445 1.0e-76 290.8 205 69.8
CDE05G1882 Ceratophyllum demersum HOM05D006848 ORTHO05D008445 1.0e-76 290.8 215 67.0
ATR0605G006 Amborella trichopoda HOM05D006848 ORTHO05D008445 1.7e-76 290.0 214 68.7
arahy.Tifrunner.gnm1.ann1.9ZN1DC Arachis hypogaea HOM05D006848 ORTHO05D008445 1.7e-76 290.0 182 76.4
BolC3t15604H Brassica oleracea HOM05D006848 ORTHO05D008445 1.7e-76 290.0 222 67.6
SalBow5G3403 Salvia bowleyana HOM05D006848 ORTHO05D008445 2.2e-76 289.7 204 69.1
RcHm_v2.0_Chr3g0473601 Rosa chinensis HOM05D006848 ORTHO05D008445 5.0e-76 288.5 191 77.5
BcaB01g02988 Brassica carinata HOM05D006848 ORTHO05D008445 6.5e-76 288.1 202 71.3
AL5G46400 Arabidopsis lyrata HOM05D006848 ORTHO05D008445 8.5e-76 287.7 214 67.3
arahy.Tifrunner.gnm1.ann1.27LE56 Arachis hypogaea HOM05D006848 ORTHO05D008445 1.1e-75 287.3 207 69.1
AUR62009377 Chenopodium quinoa HOM05D006848 ORTHO05D008445 1.1e-75 287.3 177 78.0
FAN01G1688 Fragaria x ananassa HOM05D006848 ORTHO05D008445 9.4e-75 284.3 188 74.5
AagrBONN_evm.TU.Sc2ySwM_228.3199 Anthoceros agrestis HOM05D006848 ORTHO05D008445 1.1e-72 277.3 196 65.8
SEGI_25651 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 5.7e-72 275.0 231 61.5
AUR62023058 Chenopodium quinoa HOM05D006848 ORTHO05D008445 1.7e-71 273.5 173 76.3
FAN06G1876 Fragaria x ananassa HOM05D006848 ORTHO05D008445 2.8e-71 272.7 179 75.4
ECA248G3622 Erigeron canadensis HOM05D006848 ORTHO05D008445 3.7e-71 272.3 250 63.2
Zm00001eb034740 Zea mays HOM05D006848 ORTHO05D008445 4.8e-71 271.9 178 75.8
SGA_v2.0_scaffold167G38443 Striga asiatica HOM05D006848 ORTHO05D008445 5.3e-70 268.5 199 66.3
HPP92_007477 Vanilla planifolia HOM05D006848 ORTHO05D008445 5.9e-69 265.0 200 67.5
Lj1g0010524 Lotus japonicus HOM05D006848 ORTHO05D008445 1.2e-66 257.3 172 72.7
Sp1g00010 Schrenkiella parvula HOM05D006848 ORTHO05D008445 1.2e-66 257.3 222 60.8
Sp5g00040 Schrenkiella parvula HOM05D006848 ORTHO05D008445 1.2e-66 257.3 222 60.8
C03p32680 Brassica napus HOM05D006848 ORTHO05D008445 1.6e-66 256.9 201 68.2
Thhalv10006361m.g Eutrema salsugineum HOM05D006848 ORTHO05D008445 2.7e-66 256.1 199 65.8
Manes.10G144600 Manihot esculenta HOM05D006848 ORTHO05D008445 3.0e-65 252.7 162 79.0
Aa31LG10G17430 Aethionema arabicum HOM05D006848 ORTHO05D008445 4.0e-65 252.3 152 76.3
SMO217G0004 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 8.8e-65 251.1 190 62.1
SMO356G0122 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 8.8e-65 251.1 190 62.1
Os08g0504500 Oryza sativa ssp. japonica HOM05D006848 ORTHO05D008445 2.0e-61 240.0 169 68.0
Mapoly0075s0034 Marchantia polymorpha HOM05D006848 ORTHO05D008445 1.0e-60 237.7 220 55.0
Pp3c4_11800 Physcomitrium patens HOM05D006848 ORTHO05D008445 2.9e-60 236.1 202 58.9
AT3G63540 Arabidopsis thaliana HOM05D006848 ORTHO05D008445 3.2e-59 232.6 140 76.4
Dinv43453 Davidia involucrata HOM05D006848 ORTHO05D008445 3.2e-59 232.6 146 78.1
Actinidia36713 Actinidia chinensis HOM05D006848 ORTHO05D008445 3.4e-56 222.6 132 81.8
CBR_g23941 Chara braunii HOM05D006848 ORTHO05D008445 1.7e-55 220.3 202 55.9
RcHm_v2.0_Chr1g0315791 Rosa chinensis HOM05D006848 ORTHO05D008445 2.0e-45 186.8 120 72.5
CDE05G3657 Ceratophyllum demersum HOM05D000031 ORTHO05D008445 2.7e-45 186.4 126 69.8
Hma1.2p1_0137F.1_g062450 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 2.9e-44 183.0 124 73.4
Actinidia24670 Actinidia chinensis HOM05D006848 ORTHO05D008445 4.1e-38 162.5 105 78.1
MCO14G442 Micromonas commoda HOM05D006848 ORTHO05D008445 1.9e-27 127.1 195 40.0
SEGI_20764 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 1.1e-25 121.3 123 55.3
Cre03.g198850 Chlamydomonas reinhardtii HOM05D006848 ORTHO05D008445 1.3e-23 114.4 228 33.3
PRCOL_00004469 Prasinoderma coloniale HOM05D006848 ORTHO05D008445 4.7e-18 95.9 186 35.5
A04p00030 Brassica napus HOM05D006848 ORTHO05D008445 5.2e-09 65.9 55 54.5
HanXRQChr05g0160801 Helianthus annuus HOM05D006773 ORTHO05D008775 1.3e-07 61.2 151 28.5
Ah.16g108660 Amaranthus hybridus HOM05D006773 ORTHO05D008775 2.2e-07 60.5 152 28.9
ECA246G0400 Erigeron canadensis HOM05D006773 ORTHO05D005980 3.8e-07 59.7 151 27.8
Hund17393 Selenicereus undatus HOM05D006773 ORTHO05D008775 3.8e-07 59.7 148 29.7
Lsat_1_v5_gn_6_96860 Lactuca sativa HOM05D006773 ORTHO05D008775 8.4e-07 58.5 147 28.6
Nitab4.5_0000445g0090 Nicotiana tabacum HOM05D006773 ORTHO05D008775 1.1e-06 58.2 151 28.5
Oeu025718.1 Olea europaea HOM05D006773 ORTHO05D008775 1.1e-06 58.2 147 28.6
AagrBONN_evm.TU.Sc2ySwM_368.1623 Anthoceros agrestis HOM05D006773 ORTHO05D008775 1.4e-06 57.8 154 26.0
Peaxi162Scf00263g00028 Petunia axillaris HOM05D006773 ORTHO05D008775 1.9e-06 57.4 151 27.8
MD10G1012400 Malus domestica HOM05D006773 ORTHO05D008775 3.2e-06 56.6 147 27.2
QL09p028661 Quercus lobata HOM05D006773 ORTHO05D008775 3.2e-06 56.6 151 29.8
Solyc04g064670.3 Solanum lycopersicum HOM05D006773 ORTHO05D008775 3.2e-06 56.6 165 27.9
Sopen04g026630 Solanum pennellii HOM05D006773 ORTHO05D008775 3.2e-06 56.6 165 27.9
PGSC0003DMG401024815 Solanum tuberosum HOM05D006773 ORTHO05D008775 3.2e-06 56.6 165 27.9
HPP92_004476 Vanilla planifolia HOM05D006773 ORTHO05D008775 3.2e-06 56.6 147 29.3
MBI06_g41413_MAGBIO Magnolia biondii HOM05D006773 ORTHO05D008775 4.2e-06 56.2 150 30.0
MCO12G188 Micromonas commoda HOM05D006848 ORTHO05D008445 4.2e-06 56.2 210 28.1
DCAR_031498 Daucus carota HOM05D006773 ORTHO05D008775 5.4e-06 55.8 196 28.6
Dinv25798 Davidia involucrata HOM05D006773 ORTHO05D008775 7.1e-06 55.5 151 29.1
Nn5g28592 Nelumbo nucifera HOM05D006773 ORTHO05D008775 7.1e-06 55.5 150 30.0
CAN.G2.47 Capsicum annuum HOM05D006773 ORTHO05D008775 9.3e-06 55.1 161 28.0
MD05G1012500 Malus domestica HOM05D006773 ORTHO05D008775 9.3e-06 55.1 147 27.2


User provided reference genes

Program Settings