Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03675 Aquilegia oxysepala HOM05D007373 ORTHO05D009192 3.9e-56 221.1 100 100.0
TAR374G0263 Trochodendron aralioides HOM05D007373 ORTHO05D009192 2.2e-43 178.7 98 78.6
PSO017G7276 Papaver somniferum HOM05D007373 ORTHO05D009192 4.9e-43 177.6 98 79.6
PSO478G2855 Papaver somniferum HOM05D007373 ORTHO05D009192 4.9e-43 177.6 98 79.6
TAR629G0480 Trochodendron aralioides HOM05D007373 ORTHO05D009192 6.4e-43 177.2 98 76.5
Nn3g17468 Nelumbo nucifera HOM05D007373 ORTHO05D009192 4.1e-42 174.5 98 77.6
CSS0040934 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 5.4e-42 174.1 100 74.0
CSS0019413 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 9.2e-42 173.3 100 74.0
GSVIVG01025730001 Vitis vinifera HOM05D007373 ORTHO05D009192 2.1e-41 172.2 98 74.5
QL07p043588 Quercus lobata HOM05D007373 ORTHO05D009192 2.7e-41 171.8 98 74.5
Thecc.05G065600 Theobroma cacao HOM05D007373 ORTHO05D009192 3.5e-41 171.4 98 74.5
Prupe.6G232500 Prunus persica HOM05D007373 ORTHO05D009192 4.6e-41 171.0 98 74.5
CiPaw.09G173000 Carya illinoinensis HOM05D007373 ORTHO05D009192 6.0e-41 170.6 100 73.0
PGR004G1687 Punica granatum HOM05D007373 ORTHO05D009192 1.3e-40 169.5 98 74.5
MD04G1093900 Malus domestica HOM05D007373 ORTHO05D009192 1.7e-40 169.1 98 73.5
CANSAT80G1991 Cannabis sativa HOM05D007373 ORTHO05D009192 2.3e-40 168.7 98 73.5
Sed0025593 Sechium edule HOM05D007373 ORTHO05D009192 3.0e-40 168.3 98 72.4
Dinv35786 Davidia involucrata HOM05D007373 ORTHO05D009192 3.9e-40 167.9 98 74.5
MD12G1113600 Malus domestica HOM05D007373 ORTHO05D009192 5.1e-40 167.5 98 72.4
Cfa017601 Carpinus fangiana HOM05D007373 ORTHO05D009192 6.6e-40 167.2 98 71.4
Solyc09g008155.1 Solanum lycopersicum HOM05D007373 ORTHO05D009192 8.6e-40 166.8 98 73.5
Sopen09g002960 Solanum pennellii HOM05D007373 ORTHO05D009192 8.6e-40 166.8 98 73.5
PGSC0003DMG400003861 Solanum tuberosum HOM05D007373 ORTHO05D009192 8.6e-40 166.8 98 73.5
ClCG10G020140 Citrullus lanatus HOM05D007373 ORTHO05D009192 1.1e-39 166.4 98 71.4
COL.COLO4_26968 Corchorus olitorius HOM05D007373 ORTHO05D009192 1.5e-39 166.0 98 72.4
Gohir.A09G147200 Gossypium hirsutum HOM05D007373 ORTHO05D009192 9.5e-39 163.3 98 70.4
Gohir.D09G142800 Gossypium hirsutum HOM05D007373 ORTHO05D009192 9.5e-39 163.3 98 70.4
Gorai.006G164300 Gossypium raimondii HOM05D007373 ORTHO05D009192 9.5e-39 163.3 98 70.4
Peaxi162Scf00701g00211 Petunia axillaris HOM05D007373 ORTHO05D009192 9.5e-39 163.3 98 71.4
Atru.chr8.1817 Acer truncatum HOM05D007373 ORTHO05D009192 1.2e-38 162.9 100 67.0
Eucgr.A01684 Eucalyptus grandis HOM05D007373 ORTHO05D009192 1.2e-38 162.9 98 70.4
RcHm_v2.0_Chr3g0470161 Rosa chinensis HOM05D007373 ORTHO05D009192 1.2e-38 162.9 98 71.4
Migut.J00499 Erythranthe guttata HOM05D007373 ORTHO05D009192 2.1e-38 162.2 98 72.4
Duzib128G1309 Durio zibethinus HOM05D007373 ORTHO05D009192 2.8e-38 161.8 98 69.4
Sc02g0001650 Simmondsia chinensis HOM05D007373 ORTHO05D009192 3.6e-38 161.4 98 69.4
MBI16_g10844_MAGBIO Magnolia biondii HOM05D007373 ORTHO05D009192 6.2e-38 160.6 98 71.4
Ciclev10013190m.g Citrus clementina HOM05D007373 ORTHO05D009192 1.4e-37 159.5 98 67.3
Nitab4.5_0002632g0030 Nicotiana tabacum HOM05D007373 ORTHO05D009192 1.4e-37 159.5 98 70.4
DCAR_020820 Daucus carota HOM05D007373 ORTHO05D009192 2.4e-37 158.7 98 71.4
TWI53G0924 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 2.4e-37 158.7 98 70.4
TWI74G0510 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 3.1e-37 158.3 98 69.4
EL10Ac7g16624 Beta vulgaris HOM05D007373 ORTHO05D009192 4.0e-37 157.9 98 69.4
Lj5g0010566 Lotus japonicus HOM05D007373 ORTHO05D009192 4.0e-37 157.9 98 68.4
Peaxi162Scf00311g00515 Petunia axillaris HOM05D007373 ORTHO05D009192 4.0e-37 157.9 93 72.0
Potri.016G092100 Populus trichocarpa HOM05D007373 ORTHO05D009192 4.0e-37 157.9 98 67.3
Dinv37313 Davidia involucrata HOM05D007373 ORTHO05D009192 6.8e-37 157.1 85 76.5
Cc06_g04200 Coffea canephora HOM05D007373 ORTHO05D009192 1.2e-36 156.4 98 68.4
ATR0177G027 Amborella trichopoda HOM05D007373 ORTHO05D009192 2.0e-36 155.6 98 69.4
Thhalv10022256m.g Eutrema salsugineum HOM05D007373 ORTHO05D009192 2.0e-36 155.6 98 69.4
HanXRQChr02g0051631 Helianthus annuus HOM05D007373 ORTHO05D009192 2.6e-36 155.2 98 67.3
Sabra16G0097700 Salix brachista HOM05D007373 ORTHO05D009192 2.6e-36 155.2 98 66.3
FAN02G4061 Fragaria x ananassa HOM05D007373 ORTHO05D009192 3.4e-36 154.8 98 65.3
Glyma.10G056800 Glycine max HOM05D007373 ORTHO05D009192 3.4e-36 154.8 98 64.3
FvH4_6g16300 Fragaria vesca HOM05D007373 ORTHO05D009192 4.4e-36 154.5 98 65.3
FAN14G5019 Fragaria x ananassa HOM05D007373 ORTHO05D009192 4.4e-36 154.5 98 65.3
Lsat_1_v5_gn_6_25141 Lactuca sativa HOM05D007373 ORTHO05D009192 4.4e-36 154.5 98 65.3
CAN.G900.38 Capsicum annuum HOM05D007373 ORTHO05D009192 5.8e-36 154.1 98 67.3
Sp3g08200 Schrenkiella parvula HOM05D007373 ORTHO05D009192 5.8e-36 154.1 98 68.4
THA.LOC104816346 Tarenaya hassleriana HOM05D007373 ORTHO05D009192 7.6e-36 153.7 98 67.3
AL3G21090 Arabidopsis lyrata HOM05D007373 ORTHO05D009192 9.9e-36 153.3 98 68.4
AT3G09860 Arabidopsis thaliana HOM05D007373 ORTHO05D009192 9.9e-36 153.3 98 68.4
BcaC05g29708 Brassica carinata HOM05D007373 ORTHO05D009192 9.9e-36 153.3 98 68.4
CDE10G1255 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 9.9e-36 153.3 100 65.0
HanXRQChr13g0401061 Helianthus annuus HOM05D007373 ORTHO05D009192 9.9e-36 153.3 98 66.3
CsaV3_3G035970 Cucumis sativus L. HOM05D007373 ORTHO05D009192 1.3e-35 152.9 98 65.3
Carub.0003s0895 Capsella rubella HOM05D007373 ORTHO05D009192 1.7e-35 152.5 98 68.4
CARHR084370 Cardamine hirsuta HOM05D007373 ORTHO05D009192 2.9e-35 151.8 98 67.3
ECA233G3432 Erigeron canadensis HOM05D007373 ORTHO05D009192 2.9e-35 151.8 98 65.3
Glyma.13G143300 Glycine max HOM05D007373 ORTHO05D009192 2.9e-35 151.8 93 66.7
BcaC05g29497 Brassica carinata HOM05D007373 ORTHO05D009192 3.8e-35 151.4 98 67.3
A05p39190 Brassica napus HOM05D007373 ORTHO05D009192 3.8e-35 151.4 98 67.3
C05p58240 Brassica napus HOM05D007373 ORTHO05D009192 3.8e-35 151.4 98 67.3
BolC5t34478H Brassica oleracea HOM05D007373 ORTHO05D009192 3.8e-35 151.4 98 67.3
BraA05t22708Z Brassica rapa HOM05D007373 ORTHO05D009192 3.8e-35 151.4 98 67.3
Cpa.g.sc56.30 Carica papaya HOM05D007373 ORTHO05D009192 4.9e-35 151.0 88 71.6
CDE10G0795 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 4.9e-35 151.0 100 64.0
Phvul.007G219900 Phaseolus vulgaris HOM05D007373 ORTHO05D009192 1.1e-34 149.8 98 64.3
Manes.08G010000 Manihot esculenta HOM05D007373 ORTHO05D009192 1.4e-34 149.4 98 64.3
unitig_27.g25376 Utricularia gibba HOM05D007373 ORTHO05D009192 1.4e-34 149.4 98 66.3
Lalb_Chr02g0155881 Lupinus albus HOM05D007373 ORTHO05D009192 3.2e-34 148.3 98 64.3
Lalb_Chr02g0155991 Lupinus albus HOM05D007373 ORTHO05D009192 3.2e-34 148.3 98 64.3
Actinidia28903 Actinidia chinensis HOM05D007373 ORTHO05D009192 7.3e-31 137.1 98 59.2
Medtr1g063360 Medicago truncatula HOM05D007373 ORTHO05D009192 9.6e-31 136.7 99 60.6
Actinidia08775 Actinidia chinensis HOM05D007373 ORTHO05D009192 1.3e-30 136.3 98 58.2
Duzib106G1098 Durio zibethinus HOM05D007373 ORTHO05D009192 1.8e-29 132.5 132 48.5
AUR62040359 Chenopodium quinoa HOM05D007373 ORTHO05D009192 3.1e-29 131.7 98 60.2
AUR62042495 Chenopodium quinoa HOM05D007373 ORTHO05D009192 3.1e-29 131.7 98 60.2
TPR.G6865 Trifolium pratense HOM05D007373 ORTHO05D009192 4.0e-29 131.3 99 59.6
BolC1t05427H Brassica oleracea HOM05D007373 ORTHO05D009192 2.0e-28 129.0 86 66.3
Psat6g073000 Pisum sativum HOM05D007373 ORTHO05D009192 3.4e-28 128.3 99 56.6
SGA_v2.0_scaffold40G15517 Striga asiatica HOM05D007373 ORTHO05D009192 7.1e-26 120.6 109 52.3
Pp3c23_20900 Physcomitrium patens HOM05D007373 ORTHO05D009192 1.7e-24 115.9 99 54.5
Aa31LG3G2330 Aethionema arabicum HOM05D007373 ORTHO05D009192 3.9e-24 114.8 168 38.1
Nitab4.5_0000578g0180 Nicotiana tabacum HOM05D007373 ORTHO05D009192 5.1e-24 114.4 71 67.6
Mapoly0091s0024 Marchantia polymorpha HOM05D007373 ORTHO05D009192 9.0e-21 103.6 99 49.5
AagrBONN_evm.TU.Sc2ySwM_368.2821 Anthoceros agrestis HOM05D007373 ORTHO05D009192 2.7e-17 92.0 100 48.0
BcaB04g21242 Brassica carinata HOM05D007373 ORTHO05D009192 3.0e-16 88.6 58 62.1
SEGI_18158 Sequoiadendron giganteum HOM05D007373 ORTHO05D009192 9.0e-13 77.0 98 38.8
Nn2g15280 Nelumbo nucifera HOM05D007373 ORTHO05D009192 1.7e-11 72.8 38 84.2
Ah.15g092500 Amaranthus hybridus HOM05D007373 ORTHO05D009192 3.5e-09 65.1 37 70.3
Os03g0578200 Oryza sativa ssp. japonica HOM05D007373 ORTHO05D009192 3.0e-08 62.0 74 40.5
Atru.BG.127.p Acer truncatum HOM05D007373 ORTHO05D009192 1.5e-07 59.7 30 80.0
Zm00001eb212440 Zea mays HOM05D007373 ORTHO05D009192 2.5e-07 58.9 74 36.5
Zm00001eb061850 Zea mays HOM05D007373 ORTHO05D009192 2.8e-06 55.5 74 35.1


User provided reference genes

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