Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03598 Aquilegia oxysepala HOM05D007413 ORTHO05D009357 1.8e-51 205.7 110 100.0
Nn3g17420 Nelumbo nucifera HOM05D007413 ORTHO05D009357 4.6e-18 94.7 112 56.2
Nn4g23392 Nelumbo nucifera HOM05D007413 ORTHO05D009357 3.0e-17 92.0 112 53.6
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 2.5e-16 89.0 83 57.8
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 2.8e-15 85.5 88 58.0
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 1.4e-14 83.2 97 56.7
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 1.4e-14 83.2 84 56.0
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 3.1e-14 82.0 88 52.3
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 4.0e-14 81.6 91 54.9
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 5.2e-14 81.3 112 50.9
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 9.0e-14 80.5 104 49.0
Potri.017G093000 Populus trichocarpa HOM05D007413 ORTHO05D009357 1.5e-13 79.7 97 48.5
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 1.5e-13 79.7 96 49.0
CSS0009905 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 2.6e-13 79.0 105 50.5
CSS0018085 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 2.6e-13 79.0 105 50.5
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 2.6e-13 79.0 108 51.9
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 3.4e-13 78.6 106 45.3
Migut.H00635 Erythranthe guttata HOM05D007413 ORTHO05D009357 5.8e-13 77.8 96 53.1
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 7.6e-13 77.4 103 46.6
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 7.6e-13 77.4 104 50.0
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 1.3e-12 76.6 79 55.7
Oeu007062.1 Olea europaea HOM05D007413 ORTHO05D009357 1.3e-12 76.6 90 47.8
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 2.2e-12 75.9 100 47.0
CDE10G0216 Ceratophyllum demersum HOM05D001577 ORTHO05D008017 4.9e-12 74.7 103 46.6
CSS0018963 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 6.4e-12 74.3 103 47.6
CAN.G398.10 Capsicum annuum HOM05D007413 ORTHO05D009357 6.4e-12 74.3 68 54.4
CiPaw.03G089400 Carya illinoinensis HOM05D007413 ORTHO05D009357 6.4e-12 74.3 109 46.8
Sabra17G0082000 Salix brachista HOM05D007413 ORTHO05D009357 6.4e-12 74.3 105 45.7
TAR629G1767 Trochodendron aralioides HOM05D007413 ORTHO05D009357 8.4e-12 73.9 112 47.3
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 1.1e-11 73.6 63 60.3
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 1.4e-11 73.2 82 50.0
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 1.4e-11 73.2 54 63.0
Oeu010247.1 Olea europaea HOM05D007413 ORTHO05D009357 1.9e-11 72.8 98 51.0
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 1.9e-11 72.8 109 41.3
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 5.4e-11 71.2 106 43.4
Solyc02g066970.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 5.4e-11 71.2 105 41.0
Glyma.13G057000 Glycine max HOM05D007413 ORTHO05D009357 7.1e-11 70.9 91 47.3
MD09G1064600 Malus domestica HOM05D007413 ORTHO05D009357 9.3e-11 70.5 97 47.4
CDE10G0699 Ceratophyllum demersum HOM05D007413 ORTHO05D009357 1.2e-10 70.1 104 43.3
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.2e-10 70.1 106 43.4
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 1.2e-10 70.1 110 40.0
SalBow1G0329 Salvia bowleyana HOM05D007413 ORTHO05D009357 1.2e-10 70.1 61 60.7
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 2.1e-10 69.3 106 43.4
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 2.1e-10 69.3 106 43.4
SGA_v2.0_scaffold148G36473 Striga asiatica HOM05D007413 ORTHO05D009357 2.1e-10 69.3 93 47.3
ClCG07G007410 Citrullus lanatus HOM05D007413 ORTHO05D009357 2.7e-10 68.9 76 50.0
Ciclev10013609m.g Citrus clementina HOM05D007413 ORTHO05D009357 2.7e-10 68.9 78 50.0
PGSC0003DMG400025144 Solanum tuberosum HOM05D007413 ORTHO05D009357 3.5e-10 68.6 107 39.3
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 3.5e-10 68.6 111 43.2
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 4.6e-10 68.2 84 48.8
Sopen02g016170 Solanum pennellii HOM05D007413 ORTHO05D009357 6.0e-10 67.8 105 41.0
Medtr6g015150 Medicago truncatula HOM05D007413 ORTHO05D009357 7.8e-10 67.4 54 57.4
MD17G1057900 Malus domestica HOM05D007413 ORTHO05D009357 1.3e-09 66.6 99 45.5
FAN05G2048 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.7e-09 66.2 105 41.9
Phvul.004G035200 Phaseolus vulgaris HOM05D007413 ORTHO05D009357 1.7e-09 66.2 100 46.0
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 2.3e-09 65.9 94 45.7
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 3.0e-09 65.5 104 40.4
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 3.0e-09 65.5 57 59.6
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 5.1e-09 64.7 53 60.4
unitig_62.g23378 Utricularia gibba HOM05D007413 ORTHO05D009357 6.6e-09 64.3 55 58.2
RcHm_v2.0_Chr2g0166071 Rosa chinensis HOM05D007413 ORTHO05D009357 8.7e-09 63.9 97 43.3
Actinidia26249 Actinidia chinensis HOM05D007413 ORTHO05D009357 1.1e-08 63.5 100 45.0
Nitab4.5_0005916g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.1e-08 63.5 93 48.4
ATR0064G025 Amborella trichopoda HOM05D007413 ORTHO05D009357 1.9e-08 62.8 68 51.5
MELO3C022028.2 Cucumis melo HOM05D007413 ORTHO05D009357 2.5e-08 62.4 119 41.2
Eucgr.I02025 Eucalyptus grandis HOM05D007413 ORTHO05D009357 2.5e-08 62.4 85 45.9
DCAR_011043 Daucus carota HOM05D007413 ORTHO05D009357 3.3e-08 62.0 87 47.1
SGA_v2.0_scaffold52G19169 Striga asiatica HOM05D007413 ORTHO05D009357 3.3e-08 62.0 57 54.4
MELO3C024851.2 Cucumis melo HOM05D007413 ORTHO05D009357 4.3e-08 61.6 89 43.8
Lsat_1_v5_gn_4_171221 Lactuca sativa HOM05D007413 ORTHO05D009357 4.3e-08 61.6 67 49.3
TWI34G0597 Tripterygium wilfordii HOM05D007413 ORTHO05D009357 4.3e-08 61.6 121 40.5
COL.COLO4_00052 Corchorus olitorius HOM05D007413 ORTHO05D009357 5.6e-08 61.2 60 58.3
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 5.6e-08 61.2 109 44.0
Gohir.D04G043900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 5.6e-08 61.2 122 37.7
Lalb_Chr02g0158971 Lupinus albus HOM05D007413 ORTHO05D009357 7.3e-08 60.8 100 40.0
Aa31LG2G3920 Aethionema arabicum HOM05D007413 ORTHO05D009357 2.8e-07 58.9 109 39.4
Gorai.012G049200 Gossypium raimondii HOM05D007413 ORTHO05D009357 2.8e-07 58.9 122 36.9
Sc14g0006230 Simmondsia chinensis HOM05D007413 ORTHO05D009357 3.6e-07 58.5 60 51.7
Rhsim08G0074700 Rhododendron simsii HOM05D007413 ORTHO05D009357 1.4e-06 56.6 39 79.5
Sed0019528 Sechium edule HOM05D007413 ORTHO05D009357 1.4e-06 56.6 116 38.8
ClCG11G004700 Citrullus lanatus HOM05D007413 ORTHO05D009357 1.8e-06 56.2 121 38.0
Gohir.A05G371900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 1.8e-06 56.2 109 39.4
Sp7g02750 Schrenkiella parvula HOM05D007413 ORTHO05D009357 1.8e-06 56.2 96 40.6
CARHR263170 Cardamine hirsuta HOM05D007413 ORTHO05D009357 2.4e-06 55.8 75 48.0
Lalb_Chr21g0318381 Lupinus albus HOM05D007413 ORTHO05D009357 4.0e-06 55.1 56 51.8
HPP92_023631 Vanilla planifolia HOM05D007413 ORTHO05D009357 4.0e-06 55.1 105 39.0
AT5G39240 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 5.3e-06 54.7 93 39.8
MD17G1278000 Malus domestica HOM05D006547 ORTHO05D008112 5.3e-06 54.7 89 32.6
AT3G29370 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 6.9e-06 54.3 75 44.0
PGR004G0469 Punica granatum HOM05D007413 ORTHO05D009357 9.0e-06 53.9 121 38.8


User provided reference genes

Program Settings