Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03441 Aquilegia oxysepala HOM05D008101 ORTHO05D010163 4.1e-38 161.0 86 100.0
Potri.010G234200 Populus trichocarpa HOM05D008101 ORTHO05D010163 1.6e-10 69.3 53 69.8
Migut.H00938 Erythranthe guttata HOM05D008101 ORTHO05D010163 2.1e-10 68.9 51 68.6
Dinv33773 Davidia involucrata HOM05D008101 ORTHO05D010163 2.8e-10 68.6 61 60.7
RcHm_v2.0_Chr2g0167501 Rosa chinensis HOM05D008101 ORTHO05D010163 2.8e-10 68.6 56 64.3
RcHm_v2.0_Chr2g0167541 Rosa chinensis HOM05D008101 ORTHO05D010163 3.6e-10 68.2 56 64.3
Thecc.04G085600 Theobroma cacao HOM05D008101 ORTHO05D010163 3.6e-10 68.2 51 68.6
Gohir.A07G206000 Gossypium hirsutum HOM05D008101 ORTHO05D010163 4.7e-10 67.8 51 66.7
Gohir.D07G212050 Gossypium hirsutum HOM05D008101 ORTHO05D010163 6.1e-10 67.4 51 66.7
Gorai.001G239800 Gossypium raimondii HOM05D008101 ORTHO05D010163 6.1e-10 67.4 51 66.7
CiPaw.03G024700 Carya illinoinensis HOM05D008101 ORTHO05D010163 1.4e-09 66.2 53 67.9
PGR083G0374 Punica granatum HOM05D008101 ORTHO05D010163 1.4e-09 66.2 53 64.2
RcHm_v2.0_Chr2g0167591 Rosa chinensis HOM05D008101 ORTHO05D010163 1.4e-09 66.2 56 62.5
Manes.02G047600 Manihot esculenta HOM05D008101 ORTHO05D010163 3.0e-09 65.1 51 70.6
CSS0047461 Camellia sinensis var. sinensis HOM05D008101 ORTHO05D010163 6.8e-09 63.9 51 62.7
FAN09G1556 Fragaria x ananassa HOM05D008101 ORTHO05D010163 6.8e-09 63.9 54 61.1
Cc07_g03530 Coffea canephora HOM05D008101 ORTHO05D010163 1.2e-08 63.2 51 66.7
FvH4_6g48300 Fragaria vesca HOM05D008101 ORTHO05D010163 1.5e-08 62.8 51 64.7
FAN09G0090 Fragaria x ananassa HOM05D008101 ORTHO05D010163 1.5e-08 62.8 51 64.7
FAN14G5148 Fragaria x ananassa HOM05D008101 ORTHO05D010163 1.5e-08 62.8 51 64.7
MD09G1053300 Malus domestica HOM05D008101 ORTHO05D010163 1.5e-08 62.8 51 66.7
FAN02G2446 Fragaria x ananassa HOM05D008101 ORTHO05D010163 2.6e-08 62.0 54 59.3
FAN05G3293 Fragaria x ananassa HOM05D008101 ORTHO05D010163 3.4e-08 61.6 52 61.5
Prupe.3G265300 Prunus persica HOM05D008101 ORTHO05D010163 7.5e-08 60.5 53 62.3
Sopen02g032840 Solanum pennellii HOM05D008101 ORTHO05D010163 2.8e-07 58.5 53 60.4
Nn4g23220 Nelumbo nucifera HOM05D008101 ORTHO05D010163 4.9e-07 57.8 51 56.9
SalBow1G0549 Salvia bowleyana HOM05D008101 ORTHO05D010163 1.1e-06 56.6 51 64.7
SalBow1G6176 Salvia bowleyana HOM05D008101 ORTHO05D010163 1.1e-06 56.6 51 64.7
SEGI_19148 Sequoiadendron giganteum HOM05D008101 ORTHO05D010163 1.1e-06 56.6 52 53.8
SalBow8G3752 Salvia bowleyana HOM05D008101 ORTHO05D010163 1.4e-06 56.2 51 64.7
Nn3g17291 Nelumbo nucifera HOM05D008101 ORTHO05D010163 1.8e-06 55.8 51 58.8
Os04g0460350 Oryza sativa ssp. japonica HOM05D008101 ORTHO05D010163 2.4e-06 55.5 53 56.6
Glyma.13G062100 Glycine max HOM05D008101 ORTHO05D010163 3.1e-06 55.1 56 55.4
CAN.G206.165 Capsicum annuum HOM05D008101 ORTHO05D010163 4.1e-06 54.7 53 56.6
Sed0001905 Sechium edule HOM05D008101 ORTHO05D010163 7.0e-06 53.9 53 58.5


User provided reference genes

Program Settings