Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03421 Aquilegia oxysepala HOM05D004671 ORTHO05D005638 3.2e-295 1017.7 527 100.0
TAR629G1771 Trochodendron aralioides HOM05D004671 ORTHO05D005638 8.8e-184 647.5 536 64.7
GSVIVG01028933001 Vitis vinifera HOM05D004671 ORTHO05D005638 2.0e-167 593.2 535 60.6
Nn3g16880 Nelumbo nucifera HOM05D004671 ORTHO05D005638 2.8e-166 589.3 514 61.7
Dinv24388 Davidia involucrata HOM05D004671 ORTHO05D005638 9.2e-157 557.8 536 57.8
PSO063G7539 Papaver somniferum HOM05D004671 ORTHO05D005638 3.6e-153 545.8 534 56.7
PSO017G5643 Papaver somniferum HOM05D004671 ORTHO05D005638 6.8e-152 541.6 534 56.4
Thecc.03G178300 Theobroma cacao HOM05D004671 ORTHO05D005638 8.3e-150 534.6 535 57.0
Duzib205G1877 Durio zibethinus HOM05D004671 ORTHO05D005638 2.0e-148 530.0 559 54.7
Ciclev10004721m.g Citrus clementina HOM05D004671 ORTHO05D005638 1.0e-147 527.7 533 54.8
vmacro09835 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 4.7e-145 518.8 567 52.6
Cpa.g.sc107.62 Carica papaya HOM05D004671 ORTHO05D005638 6.8e-144 515.0 555 53.2
COL.COLO4_14329 Corchorus olitorius HOM05D004671 ORTHO05D005638 1.1e-141 507.7 536 54.3
Gorai.006G048800 Gossypium raimondii HOM05D004671 ORTHO05D005638 3.2e-141 506.1 535 55.1
Manes.14G025200 Manihot esculenta HOM05D004671 ORTHO05D005638 2.1e-140 503.4 531 53.1
Cfa002753 Carpinus fangiana HOM05D004671 ORTHO05D005638 3.5e-140 502.7 546 52.6
Gohir.D09G042500 Gossypium hirsutum HOM05D004671 ORTHO05D005638 7.8e-140 501.5 535 54.6
Eucgr.K00269 Eucalyptus grandis HOM05D004671 ORTHO05D005638 2.3e-139 500.0 530 52.8
CANSAT21G1295 Cannabis sativa HOM05D004671 ORTHO05D005638 6.6e-139 498.4 535 53.5
CANSAT21G1725 Cannabis sativa HOM05D004671 ORTHO05D005638 1.5e-138 497.3 535 53.3
Gohir.A09G041700 Gossypium hirsutum HOM05D004671 ORTHO05D005638 1.5e-138 497.3 535 55.0
Cfa022980 Carpinus fangiana HOM05D004671 ORTHO05D005638 1.6e-137 493.8 534 51.5
CiPaw.03G107600 Carya illinoinensis HOM05D004671 ORTHO05D005638 3.6e-137 492.7 525 53.3
CAN.G208.79 Capsicum annuum HOM05D004671 ORTHO05D005638 2.9e-134 483.0 534 51.5
DCAR_015049 Daucus carota HOM05D004671 ORTHO05D005638 3.7e-134 482.6 532 51.1
vmacro21316 Vaccinium macrocarpon HOM05D004671 ORTHO05D005638 1.4e-133 480.7 537 52.1
Atru.chr1.442 Acer truncatum HOM05D004671 ORTHO05D005638 1.9e-133 480.3 532 50.4
GSVIVG01017918001 Vitis vinifera HOM05D004671 ORTHO05D005638 2.4e-133 479.9 535 52.5
DCAR_010301 Daucus carota HOM05D004671 ORTHO05D005638 4.1e-133 479.2 533 51.4
Potri.015G144900 Populus trichocarpa HOM05D004671 ORTHO05D005638 2.1e-132 476.9 532 50.6
Cc02_g02840 Coffea canephora HOM05D004671 ORTHO05D005638 1.3e-131 474.2 538 50.9
Nitab4.5_0001951g0070 Nicotiana tabacum HOM05D004671 ORTHO05D005638 3.3e-130 469.5 549 49.5
MSTRG.27109 Avicennia marina HOM05D004671 ORTHO05D005638 4.3e-130 469.2 536 48.7
PGR142G1152 Punica granatum HOM05D004671 ORTHO05D005638 6.2e-129 465.3 533 49.3
Prupe.2G295500 Prunus persica HOM05D004671 ORTHO05D005638 2.4e-128 463.4 537 50.5
MD01G1202100 Malus domestica HOM05D004671 ORTHO05D005638 4.0e-128 462.6 527 49.1
MD07G1271200 Malus domestica HOM05D004671 ORTHO05D005638 3.4e-127 459.5 527 48.8
TWI14G0685 Tripterygium wilfordii HOM05D004671 ORTHO05D005638 4.4e-127 459.1 532 50.0
Lalb_Chr06g0161161 Lupinus albus HOM05D004671 ORTHO05D005638 7.6e-127 458.4 534 50.4
Rhsim09G0198100 Rhododendron simsii HOM05D004671 ORTHO05D005638 1.3e-126 457.6 507 51.7
Phvul.007G071300 Phaseolus vulgaris HOM05D004671 ORTHO05D005638 2.2e-126 456.8 538 49.4
Sc13g0008790 Simmondsia chinensis HOM05D004671 ORTHO05D005638 2.4e-125 453.4 537 49.7
Glyma.10G234800 Glycine max HOM05D004671 ORTHO05D005638 4.2e-125 452.6 539 47.9
Sabra15G0154400 Salix brachista HOM05D004671 ORTHO05D005638 1.3e-123 447.6 557 47.9
Haze_25041 Corylus avellana HOM05D004671 ORTHO05D005638 1.7e-123 447.2 526 50.2
ClCG05G008100 Citrullus lanatus HOM05D004671 ORTHO05D005638 2.5e-122 443.4 547 49.0
CsaV3_3G017180 Cucumis sativus L. HOM05D004671 ORTHO05D005638 3.3e-122 443.0 535 48.8
Glyma.20G159500 Glycine max HOM05D004671 ORTHO05D005638 5.6e-122 442.2 538 46.8
Lsat_1_v5_gn_8_8441 Lactuca sativa HOM05D004671 ORTHO05D005638 7.3e-122 441.8 535 47.3
VMungo0720G2100 Vigna mungo HOM05D004671 ORTHO05D005638 9.6e-122 441.4 536 49.3
RcHm_v2.0_Chr1g0377571 Rosa chinensis HOM05D004671 ORTHO05D005638 1.3e-121 441.0 550 46.9
ECA233G0868 Erigeron canadensis HOM05D004671 ORTHO05D005638 2.8e-121 439.9 540 47.8
Actinidia03123 Actinidia chinensis HOM05D004671 ORTHO05D005638 1.1e-120 438.0 445 56.6
FvH4_7g29570 Fragaria vesca HOM05D004671 ORTHO05D005638 5.3e-120 435.6 543 47.5
arahy.Tifrunner.gnm1.ann1.V0I5I8 Arachis hypogaea HOM05D004671 ORTHO05D005638 9.0e-120 434.9 545 46.1
Ca_10754_v3 Cicer arietinum L. HOM05D004671 ORTHO05D005638 2.0e-119 433.7 539 48.8
FAN01G2609 Fragaria x ananassa HOM05D004671 ORTHO05D005638 5.8e-119 432.2 547 47.2
Lj5g0019412 Lotus japonicus HOM05D004671 ORTHO05D005638 7.6e-119 431.8 533 49.2
FAN06G5094 Fragaria x ananassa HOM05D004671 ORTHO05D005638 2.9e-118 429.9 550 47.1
FAN10G4176 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.9e-117 427.2 547 47.0
FAN10G3685 Fragaria x ananassa HOM05D004671 ORTHO05D005638 2.4e-117 426.8 547 47.0
Lsat_1_v5_gn_3_14041 Lactuca sativa HOM05D004671 ORTHO05D005638 5.4e-117 425.6 537 46.9
FAN03G0738 Fragaria x ananassa HOM05D004671 ORTHO05D005638 1.6e-116 424.1 549 46.3
HanXRQChr15g0497081 Helianthus annuus HOM05D004671 ORTHO05D005638 1.6e-116 424.1 536 45.7
Psat6g198360 Pisum sativum HOM05D004671 ORTHO05D005638 3.5e-116 422.9 536 46.8
arahy.Tifrunner.gnm1.ann1.U8RPI8 Arachis hypogaea HOM05D004671 ORTHO05D005638 7.9e-116 421.8 611 42.7
SHI26612 Sapria himalayana HOM05D004671 ORTHO05D005638 7.9e-116 421.8 538 46.5
HanXRQChr06g0163751 Helianthus annuus HOM05D004671 ORTHO05D005638 1.3e-115 421.0 529 46.1
SGA_v2.0_scaffold60G21057 Striga asiatica HOM05D004671 ORTHO05D005638 3.0e-115 419.9 534 44.4
FAN06G3892 Fragaria x ananassa HOM05D004671 ORTHO05D005638 3.9e-115 419.5 564 45.7
HanXRQChr10g0304161 Helianthus annuus HOM05D004671 ORTHO05D005638 6.6e-115 418.7 532 45.9
Migut.K00770 Erythranthe guttata HOM05D004671 ORTHO05D005638 1.6e-113 414.1 535 44.9
ATR0737G144 Amborella trichopoda HOM05D004671 ORTHO05D005638 6.2e-113 412.1 532 46.1
EL10Ac3g05622 Beta vulgaris HOM05D004671 ORTHO05D005638 1.8e-112 410.6 533 47.3
THA.LOC104818634 Tarenaya hassleriana HOM05D004671 ORTHO05D005638 1.8e-112 410.6 537 44.9
SalBow1G2445 Salvia bowleyana HOM05D004671 ORTHO05D005638 5.8e-111 405.6 531 45.4
Medtr1g101100 Medicago truncatula HOM05D004671 ORTHO05D005638 1.3e-110 404.4 538 45.9
TPR.G27007 Trifolium pratense HOM05D004671 ORTHO05D005638 2.9e-110 403.3 540 45.4
SalBow1G5895 Salvia bowleyana HOM05D004671 ORTHO05D005638 8.4e-110 401.7 541 44.9
Thhalv10010290m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 2.1e-108 397.1 535 43.9
AT3G49000 Arabidopsis thaliana HOM05D004671 ORTHO05D005638 6.0e-108 395.6 538 44.1
Aa31LG4G17500 Aethionema arabicum HOM05D004671 ORTHO05D005638 7.9e-108 395.2 537 43.9
AL6G42740 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 1.3e-107 394.4 536 43.5
BcaC01g02382 Brassica carinata HOM05D004671 ORTHO05D005638 1.5e-106 391.0 537 44.1
BolC3t18845H Brassica oleracea HOM05D004671 ORTHO05D005638 1.5e-106 391.0 537 44.1
C03p65870 Brassica napus HOM05D004671 ORTHO05D005638 1.9e-106 390.6 537 44.1
Sc13g0008760 Simmondsia chinensis HOM05D004671 ORTHO05D005638 5.6e-106 389.0 515 46.8
AL5G28510 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 2.1e-105 387.1 536 42.9
Sp5g13050 Schrenkiella parvula HOM05D004671 ORTHO05D005638 2.1e-105 387.1 535 43.9
AUR62015967 Chenopodium quinoa HOM05D004671 ORTHO05D005638 2.8e-105 386.7 552 44.6
RcHm_v2.0_Chr6g0258831 Rosa chinensis HOM05D004671 ORTHO05D005638 3.7e-105 386.3 536 43.8
BcaB02g09572 Brassica carinata HOM05D004671 ORTHO05D005638 9.0e-104 381.7 537 43.4
A06p28000 Brassica napus HOM05D004671 ORTHO05D005638 6.5e-102 375.6 537 43.0
Hund04757 Selenicereus undatus HOM05D004671 ORTHO05D005638 6.5e-102 375.6 537 44.1
Thhalv10003189m.g Eutrema salsugineum HOM05D004671 ORTHO05D005638 8.4e-102 375.2 538 42.4
BraA06t25741Z Brassica rapa HOM05D004671 ORTHO05D005638 4.2e-101 372.9 536 42.5
HPP92_020192 Vanilla planifolia HOM05D004671 ORTHO05D005638 1.2e-100 371.3 540 44.1
Haze_13677 Corylus avellana HOM05D004671 ORTHO05D005638 9.6e-98 361.7 681 37.0
Nitab4.5_0000080g0100 Nicotiana tabacum HOM05D004671 ORTHO05D005638 2.1e-97 360.5 553 42.7
CARHR157820 Cardamine hirsuta HOM05D004671 ORTHO05D005638 6.2e-97 359.0 538 40.9
Peaxi162Scf00848g00012 Petunia axillaris HOM05D004671 ORTHO05D005638 5.3e-96 355.9 387 51.2
Mapoly0133s0004 Marchantia polymorpha HOM05D004671 ORTHO05D005638 1.2e-95 354.8 561 39.4
Carub.0005s1517 Capsella rubella HOM05D004671 ORTHO05D005638 1.0e-94 351.7 549 40.8
Ah.13g068640 Amaranthus hybridus HOM05D004671 ORTHO05D005638 4.2e-93 346.3 526 41.8
Sed0007536 Sechium edule HOM05D004671 ORTHO05D005638 3.9e-91 339.7 451 46.3
Solyc06g036000.4 Solanum lycopersicum HOM05D004671 ORTHO05D005638 3.3e-90 336.7 389 49.4
Sed0027520 Sechium edule HOM05D004671 ORTHO05D005638 3.1e-88 330.1 423 46.8
AUR62021173 Chenopodium quinoa HOM05D004671 ORTHO05D005638 4.1e-88 329.7 527 41.4
MELO3C031814.2 Cucumis melo HOM05D004671 ORTHO05D005638 1.2e-87 328.2 490 43.7
AagrBONN_evm.TU.Sc2ySwM_344.423 Anthoceros agrestis HOM05D004671 ORTHO05D005638 2.6e-87 327.0 560 37.3
unitig_37.g12531 Utricularia gibba HOM05D004671 ORTHO05D005638 1.1e-85 321.6 542 40.4
Pp3c16_7220 Physcomitrium patens HOM05D004671 ORTHO05D005638 3.2e-85 320.1 568 37.3
Sc13g0008680 Simmondsia chinensis HOM05D004671 ORTHO05D005638 4.6e-84 316.2 467 44.3
Carub.0004s0531 Capsella rubella HOM05D004671 ORTHO05D005638 6.7e-83 312.4 545 37.2
Sopen06g011780 Solanum pennellii HOM05D004671 ORTHO05D005638 1.3e-81 308.1 336 50.9
Zm00001eb160040 Zea mays HOM05D004671 ORTHO05D005638 4.8e-81 306.2 536 39.7
Os01g0679000 Oryza sativa ssp. japonica HOM05D004671 ORTHO05D005638 1.1e-80 305.1 535 40.0
CDE04G3622 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 1.5e-79 301.2 346 51.4
QL09p013914 Quercus lobata HOM05D004671 ORTHO05D005638 7.2e-77 292.4 277 57.4
arahy.Tifrunner.gnm1.ann1.R5FQEP Arachis hypogaea HOM05D004671 ORTHO05D005638 1.3e-70 271.6 401 44.1
CSS0035516 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 1.5e-61 241.5 271 52.8
SMO143G0293 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 5.5e-61 239.6 496 36.5
Oeu004097.1 Olea europaea HOM05D004671 ORTHO05D005638 1.2e-60 238.4 218 58.7
SMO276G0042 Selaginella moellendorffii HOM05D004671 ORTHO05D005638 6.1e-60 236.1 451 35.7
MD07G1271300 Malus domestica HOM05D004671 ORTHO05D005638 2.3e-59 234.2 279 46.6
arahy.Tifrunner.gnm1.ann1.4LKL39 Arachis hypogaea HOM05D004671 ORTHO05D005638 3.1e-56 223.8 349 41.5
Migut.K01220 Erythranthe guttata HOM05D004671 ORTHO05D005638 1.5e-50 204.9 234 48.7
Ah.13g076510 Amaranthus hybridus HOM05D004671 ORTHO05D007692 2.9e-46 190.7 449 33.6
CDE04G1371 Ceratophyllum demersum HOM05D004671 ORTHO05D005638 3.7e-41 173.7 167 51.5
CSS0016908 Camellia sinensis var. sinensis HOM05D004671 ORTHO05D005638 7.0e-40 169.5 143 58.7
Oeu002719.1 Olea europaea HOM05D004671 ORTHO05D005638 5.9e-39 166.4 293 41.3
HanXRQChr06g0163701 Helianthus annuus HOM05D001754 ORTHO05D005638 4.4e-34 150.2 342 33.0
Glyma.20G157700 Glycine max HOM05D004671 ORTHO05D005638 2.4e-32 144.4 136 51.5
BolC8t50021H Brassica oleracea HOM05D004671 ORTHO05D005638 1.7e-30 138.3 153 45.8
C08p23970 Brassica napus HOM05D004671 ORTHO05D005638 3.9e-30 137.1 153 46.4
Cre16.g673900 Chlamydomonas reinhardtii HOM05D004671 ORTHO05D005638 1.1e-29 135.6 662 23.4
BcaC07g39376 Brassica carinata HOM05D004671 ORTHO05D005638 3.3e-29 134.0 147 46.3
CBR_g5700 Chara braunii HOM05D004671 ORTHO05D005638 1.8e-27 128.3 165 40.0
MCO01G383 Micromonas commoda HOM05D004671 ORTHO05D005638 4.4e-26 123.6 536 25.6
Zm00001eb440850 Zea mays HOM05D004671 ORTHO05D005638 1.7e-25 121.7 173 43.4
Glyma.12G162990 Glycine max HOM05D004671 ORTHO05D005638 1.9e-24 118.2 121 49.6
BcaB01g00761 Brassica carinata HOM05D004671 ORTHO05D005638 4.1e-24 117.1 215 33.5
CAN.G527.1 Capsicum annuum HOM05D004671 ORTHO05D005638 4.1e-24 117.1 251 35.1
Peaxi162Scf00848g00015 Petunia axillaris HOM05D004671 ORTHO05D005638 8.6e-22 109.4 140 44.3
CBR_g5701 Chara braunii HOM05D004671 ORTHO05D005638 3.6e-20 104.0 190 32.1
AL5G14400 Arabidopsis lyrata HOM05D004671 ORTHO05D005638 4.6e-15 87.0 231 31.2
Cre11.g476376 Chlamydomonas reinhardtii HOM05D030013 ORTHO05D028799 4.6e-15 87.0 170 33.5
CBR_g26425 Chara braunii HOM05D004671 ORTHO05D005638 7.1e-08 63.2 96 38.5


User provided reference genes

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