Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03339 Aquilegia oxysepala HOM05D005097 ORTHO05D006186 6.0e-55 218.0 184 100.0
COL.COLO4_22981 Corchorus olitorius HOM05D005097 ORTHO05D006186 1.1e-24 117.5 141 53.9
CiPaw.05G214900 Carya illinoinensis HOM05D005097 ORTHO05D006186 7.9e-23 111.3 137 62.8
Cpa.g.c36484 Carica papaya HOM05D005097 ORTHO05D006186 1.8e-22 110.2 130 64.6
QL03p064734 Quercus lobata HOM05D005097 ORTHO05D006186 1.8e-22 110.2 143 60.1
CiPaw.06G083100 Carya illinoinensis HOM05D005097 ORTHO05D006186 1.5e-21 107.1 144 62.5
TAR629G2181 Trochodendron aralioides HOM05D005097 ORTHO05D006186 3.3e-21 105.9 132 51.5
Dinv34170 Davidia involucrata HOM05D005097 ORTHO05D006186 1.3e-20 104.0 127 48.0
Atru.chr11.1825 Acer truncatum HOM05D005097 ORTHO05D006186 3.7e-20 102.4 136 48.5
Cfa009001 Carpinus fangiana HOM05D005097 ORTHO05D006186 4.8e-20 102.1 137 62.0
Manes.05G099600 Manihot esculenta HOM05D005097 ORTHO05D006186 8.2e-20 101.3 139 60.4
Gohir.D02G124700 Gossypium hirsutum HOM05D005097 ORTHO05D006186 1.1e-19 100.9 140 47.1
Gorai.005G140300 Gossypium raimondii HOM05D005097 ORTHO05D006186 1.1e-19 100.9 140 47.1
Haze_12031 Corylus avellana HOM05D005097 ORTHO05D006186 1.8e-19 100.1 140 61.4
Duzib251G0564 Durio zibethinus HOM05D005097 ORTHO05D006186 1.8e-19 100.1 145 44.1
Gohir.A03G099800 Gossypium hirsutum HOM05D005097 ORTHO05D006186 1.8e-19 100.1 141 48.2
Manes.01G187400 Manihot esculenta HOM05D005097 ORTHO05D006186 2.4e-19 99.8 145 62.1
Nn4g23108 Nelumbo nucifera HOM05D005097 ORTHO05D006186 5.3e-19 98.6 128 46.9
CiPaw.05G137400 Carya illinoinensis HOM05D005097 ORTHO05D006186 6.9e-19 98.2 143 62.2
Aa31LG7G8220 Aethionema arabicum HOM05D005097 ORTHO05D006186 1.5e-18 97.1 134 53.7
CiPaw.13G150200 Carya illinoinensis HOM05D005097 ORTHO05D006186 2.6e-18 96.3 70 68.6
Gohir.A13G073300 Gossypium hirsutum HOM05D005097 ORTHO05D006186 3.4e-18 95.9 150 47.3
Gohir.D13G073300 Gossypium hirsutum HOM05D005097 ORTHO05D006186 1.0e-17 94.4 148 45.9
Gorai.013G084000 Gossypium raimondii HOM05D005097 ORTHO05D006186 1.0e-17 94.4 148 45.9
Hma1.2p1_0598F.1_g186730 Hydrangea macrophylla HOM05D005097 ORTHO05D006186 1.0e-17 94.4 131 47.3
TAR622G0694 Trochodendron aralioides HOM05D005097 ORTHO05D006186 1.0e-17 94.4 134 49.3
MD16G1075200 Malus domestica HOM05D005097 ORTHO05D006186 1.7e-17 93.6 134 47.0
PSO063G6767 Papaver somniferum HOM05D005097 ORTHO05D006186 5.0e-17 92.0 131 59.5
Thecc.02G349700 Theobroma cacao HOM05D005097 ORTHO05D006186 6.5e-17 91.7 153 56.2
PSO832G2020 Papaver somniferum HOM05D005097 ORTHO05D006186 1.1e-16 90.9 131 58.8
DCAR_007146 Daucus carota HOM05D005097 ORTHO05D006186 1.4e-16 90.5 134 41.0
Glyma.18G121900 Glycine max HOM05D005097 ORTHO05D006186 3.2e-16 89.4 131 55.7
Phvul.003G067200 Phaseolus vulgaris HOM05D005097 ORTHO05D006186 3.2e-16 89.4 128 46.1
Prupe.1G272000 Prunus persica HOM05D005097 ORTHO05D006186 7.2e-16 88.2 151 44.4
Rhsim12G0061600 Rhododendron simsii HOM05D005097 ORTHO05D006186 7.2e-16 88.2 127 42.5
BcaB03g14754 Brassica carinata HOM05D005097 ORTHO05D006186 9.4e-16 87.8 132 45.5
Ciclev10032896m.g Citrus clementina HOM05D005097 ORTHO05D006186 9.4e-16 87.8 131 58.8
Eucgr.B03425 Eucalyptus grandis HOM05D005097 ORTHO05D006186 9.4e-16 87.8 132 56.1
C06p43570 Brassica napus HOM05D005097 ORTHO05D006186 1.2e-15 87.4 134 52.2
FAN22G0952 Fragaria x ananassa HOM05D005097 ORTHO05D006186 1.2e-15 87.4 133 55.6
Glyma.08G299000 Glycine max HOM05D005097 ORTHO05D006186 1.2e-15 87.4 134 58.2
MD13G1074000 Malus domestica HOM05D005097 ORTHO05D006186 1.2e-15 87.4 137 45.3
BcaC08g46423 Brassica carinata HOM05D005097 ORTHO05D006186 1.6e-15 87.0 134 52.2
A07p36180 Brassica napus HOM05D005097 ORTHO05D006186 1.6e-15 87.0 134 50.7
BolC6t39429H Brassica oleracea HOM05D005097 ORTHO05D006186 1.6e-15 87.0 134 52.2
BraA07t31193Z Brassica rapa HOM05D005097 ORTHO05D006186 1.6e-15 87.0 134 50.7
PGR102G3149 Punica granatum HOM05D005097 ORTHO05D006186 1.6e-15 87.0 129 44.2
EL10Ac6g13179 Beta vulgaris HOM05D005097 ORTHO05D006186 2.1e-15 86.7 143 44.8
BcaB03g15503 Brassica carinata HOM05D005097 ORTHO05D006186 2.1e-15 86.7 138 50.7
BcaC03g15115 Brassica carinata HOM05D005097 ORTHO05D006186 2.1e-15 86.7 132 51.5
BolC2t08749H Brassica oleracea HOM05D005097 ORTHO05D006186 2.1e-15 86.7 132 51.5
FAN07G0101 Fragaria x ananassa HOM05D005097 ORTHO05D006186 2.7e-15 86.3 133 49.6
FAN12G0365 Fragaria x ananassa HOM05D005097 ORTHO05D006186 2.7e-15 86.3 134 56.7
Sp5g24880 Schrenkiella parvula HOM05D005097 ORTHO05D006186 2.7e-15 86.3 134 55.2
FAN17G3076 Fragaria x ananassa HOM05D005097 ORTHO05D006186 3.6e-15 85.9 133 49.6
Glyma.01G045200 Glycine max HOM05D005097 ORTHO05D006186 6.1e-15 85.1 129 43.4
A09p40330 Brassica napus HOM05D005097 ORTHO05D006186 7.9e-15 84.7 133 42.1
BraA09t39531Z Brassica rapa HOM05D005097 ORTHO05D006186 7.9e-15 84.7 133 42.1
Ca_04768_v3 Cicer arietinum L. HOM05D005097 ORTHO05D006186 7.9e-15 84.7 141 41.8
C06p36640 Brassica napus HOM05D005097 ORTHO05D006186 1.0e-14 84.3 131 45.0
MELO3C012082.2 Cucumis melo HOM05D005097 ORTHO05D006186 1.0e-14 84.3 69 58.0
Hma1.2p1_0265F.1_g106660 Hydrangea macrophylla HOM05D005097 ORTHO05D006186 1.0e-14 84.3 129 45.0
Lsat_1_v5_gn_4_9981 Lactuca sativa HOM05D005097 ORTHO05D006186 1.0e-14 84.3 77 57.1
Lj2g0000799 Lotus japonicus HOM05D005097 ORTHO05D006186 1.0e-14 84.3 129 42.6
AL2G28940 Arabidopsis lyrata HOM05D005097 ORTHO05D006186 1.4e-14 84.0 138 50.0
BcaC08g45866 Brassica carinata HOM05D005097 ORTHO05D006186 1.4e-14 84.0 131 48.1
A07p31380 Brassica napus HOM05D005097 ORTHO05D006186 1.4e-14 84.0 131 48.1
BolC6t38773H Brassica oleracea HOM05D005097 ORTHO05D006186 1.4e-14 84.0 131 48.1
BraA07t30773Z Brassica rapa HOM05D005097 ORTHO05D006186 1.4e-14 84.0 131 48.1
Dinv16629 Davidia involucrata HOM05D001598 ORTHO05D002757 1.4e-14 84.0 68 66.2
Sp1g21860 Schrenkiella parvula HOM05D005097 ORTHO05D006186 1.4e-14 84.0 135 45.2
CARHR025020 Cardamine hirsuta HOM05D005097 ORTHO05D006186 1.8e-14 83.6 131 44.3
TAR371G0839 Trochodendron aralioides HOM05D005097 ORTHO05D006186 1.8e-14 83.6 128 45.3
AT1G26920 Arabidopsis thaliana HOM05D005097 ORTHO05D006186 3.0e-14 82.8 128 47.7
BcaB05g24483 Brassica carinata HOM05D005097 ORTHO05D006186 3.0e-14 82.8 132 48.5
RcHm_v2.0_Chr4g0440081 Rosa chinensis HOM05D005097 ORTHO05D006186 3.0e-14 82.8 149 49.0
Carub.0001s2406 Capsella rubella HOM05D005097 ORTHO05D006186 3.9e-14 82.4 130 57.7
Peaxi162Scf00541g00067 Petunia axillaris HOM05D005097 ORTHO05D006186 3.9e-14 82.4 134 41.8
Phvul.002G088000 Phaseolus vulgaris HOM05D005097 ORTHO05D006186 5.1e-14 82.0 138 51.4
VMungo0251G1975 Vigna mungo HOM05D005097 ORTHO05D006186 5.1e-14 82.0 129 55.8
BcaC05g26373 Brassica carinata HOM05D005097 ORTHO05D006186 6.7e-14 81.6 133 41.4
BolC5t31142H Brassica oleracea HOM05D005097 ORTHO05D006186 6.7e-14 81.6 133 41.4
MBI05_g00383_MAGBIO Magnolia biondii HOM05D005097 ORTHO05D006186 6.7e-14 81.6 128 52.3
THA.LOC104822110 Tarenaya hassleriana HOM05D005097 ORTHO05D006186 6.7e-14 81.6 145 50.3
CSS0049826 Camellia sinensis var. sinensis HOM05D005097 ORTHO05D006186 1.5e-13 80.5 133 38.3
CARHR062830 Cardamine hirsuta HOM05D005097 ORTHO05D006186 1.5e-13 80.5 129 58.9
A02p16130 Brassica napus HOM05D005097 ORTHO05D006186 2.0e-13 80.1 132 47.0
BraA02t06672Z Brassica rapa HOM05D005097 ORTHO05D006186 2.0e-13 80.1 132 47.0
Sed0019373 Sechium edule HOM05D005097 ORTHO05D006186 2.6e-13 79.7 121 41.3
THA.LOC104822921 Tarenaya hassleriana HOM05D005097 ORTHO05D006186 4.4e-13 79.0 134 53.7
Ah.03g135230 Amaranthus hybridus HOM05D005097 ORTHO05D006186 5.7e-13 78.6 132 53.0
Cc11_g13240 Coffea canephora HOM05D005097 ORTHO05D006186 5.7e-13 78.6 129 42.6
ClCG05G024410 Citrullus lanatus HOM05D005097 ORTHO05D006186 7.4e-13 78.2 138 49.3
Thhalv10008900m.g Eutrema salsugineum HOM05D005097 ORTHO05D006186 9.7e-13 77.8 134 40.3
Carub.0002s1644 Capsella rubella HOM05D005097 ORTHO05D006186 1.3e-12 77.4 84 56.0
Nitab4.5_0002151g0010 Nicotiana tabacum HOM05D005097 ORTHO05D006186 1.3e-12 77.4 136 41.9
AT1G69760 Arabidopsis thaliana HOM05D005097 ORTHO05D006186 1.7e-12 77.0 80 56.2
A08p27630 Brassica napus HOM05D005097 ORTHO05D006186 1.7e-12 77.0 134 40.3
BraA08t34700Z Brassica rapa HOM05D005097 ORTHO05D006186 1.7e-12 77.0 134 40.3
DCAR_027404 Daucus carota HOM05D005097 ORTHO05D006186 2.8e-12 76.3 69 56.5
Migut.E00105 Erythranthe guttata HOM05D005097 ORTHO05D006186 2.8e-12 76.3 134 47.8
Oeu027980.1 Olea europaea HOM05D005097 ORTHO05D006186 2.8e-12 76.3 129 56.6
C02p26790 Brassica napus HOM05D005097 ORTHO05D006186 4.8e-12 75.5 132 47.0
ECA234G2746 Erigeron canadensis HOM05D005097 ORTHO05D006186 4.8e-12 75.5 77 57.1
SalBow2G0279 Salvia bowleyana HOM05D005097 ORTHO05D006186 6.3e-12 75.1 125 44.0
SalBow2G3468 Salvia bowleyana HOM05D005097 ORTHO05D006186 6.3e-12 75.1 124 42.7
AL1G38630 Arabidopsis lyrata HOM05D005097 ORTHO05D006186 8.2e-12 74.7 72 56.9
Oeu013625.1 Olea europaea HOM05D005097 ORTHO05D006186 8.2e-12 74.7 128 52.3
Oeu045409.1 Olea europaea HOM05D005097 ORTHO05D006186 8.2e-12 74.7 147 47.6
PGSC0003DMG400023051 Solanum tuberosum HOM05D005097 ORTHO05D006186 8.2e-12 74.7 134 40.3
VMungo1215G0414 Vigna mungo HOM05D005097 ORTHO05D006186 8.2e-12 74.7 140 52.9
BcaC07g39258 Brassica carinata HOM05D005097 ORTHO05D006186 1.1e-11 74.3 134 38.8
C08p22680 Brassica napus HOM05D005097 ORTHO05D006186 1.1e-11 74.3 134 38.8
BolC8t49906H Brassica oleracea HOM05D005097 ORTHO05D006186 1.1e-11 74.3 134 38.8
Psat2g121760 Pisum sativum HOM05D005097 ORTHO05D006186 1.1e-11 74.3 142 38.7
Ah.02g131220 Amaranthus hybridus HOM05D005097 ORTHO05D006186 1.4e-11 73.9 140 48.6
CSS0023945 Camellia sinensis var. sinensis HOM05D005097 ORTHO05D006186 1.4e-11 73.9 69 58.0
Actinidia07840 Actinidia chinensis HOM05D005097 ORTHO05D006186 1.8e-11 73.6 121 39.7
MSTRG.689 Avicennia marina HOM05D005097 ORTHO05D006186 1.8e-11 73.6 137 39.4
Thhalv10019695m.g Eutrema salsugineum HOM05D005097 ORTHO05D006186 1.8e-11 73.6 132 47.7
Aa31LG4G11040 Aethionema arabicum HOM05D005097 ORTHO05D006186 2.4e-11 73.2 126 42.9
PGR119G1789 Punica granatum HOM05D005097 ORTHO05D006186 2.4e-11 73.2 70 55.7
Lsat_1_v5_gn_3_52761 Lactuca sativa HOM05D005097 ORTHO05D006186 3.1e-11 72.8 126 38.9
Oeu054897.1 Olea europaea HOM05D005097 ORTHO05D006186 3.1e-11 72.8 138 46.4
SGA_v2.0_scaffold389G50580 Striga asiatica HOM05D005097 ORTHO05D006186 3.1e-11 72.8 134 41.0
MSTRG.13412 Avicennia marina HOM05D005097 ORTHO05D006186 4.1e-11 72.4 132 43.9
Nitab4.5_0007561g0010 Nicotiana tabacum HOM05D005097 ORTHO05D006186 5.3e-11 72.0 75 58.7
Sc04g0008280 Simmondsia chinensis HOM05D005097 ORTHO05D006186 5.3e-11 72.0 129 44.2
MSTRG.2351 Avicennia marina HOM05D005097 ORTHO05D006186 7.0e-11 71.6 131 39.7
Solyc05g007240.1 Solanum lycopersicum HOM05D005097 ORTHO05D006186 1.2e-10 70.9 125 40.0
BcaB03g12015 Brassica carinata HOM05D005097 ORTHO05D006186 1.6e-10 70.5 128 38.3
MSTRG.7812 Avicennia marina HOM05D005097 ORTHO05D006186 2.0e-10 70.1 145 38.6
Sopen05g003200 Solanum pennellii HOM05D005097 ORTHO05D006186 2.0e-10 70.1 125 39.2
Eucgr.G02516 Eucalyptus grandis HOM05D005097 ORTHO05D006186 3.5e-10 69.3 133 51.1
Nn3g17188 Nelumbo nucifera HOM05D005097 ORTHO05D006186 5.9e-10 68.6 130 53.1
SalBow8G4444 Salvia bowleyana HOM05D005097 ORTHO05D006186 5.9e-10 68.6 70 54.3
Migut.L01312 Erythranthe guttata HOM05D005097 ORTHO05D006186 1.3e-09 67.4 70 57.1
AUR62028807 Chenopodium quinoa HOM05D005097 ORTHO05D006186 8.5e-09 64.7 76 53.9
ATR0564G527 Amborella trichopoda HOM05D005097 ORTHO05D006186 4.2e-08 62.4 142 35.9
Eucgr.G02514 Eucalyptus grandis HOM05D005097 ORTHO05D006186 1.2e-07 60.8 136 40.4
HanXRQChr17g0545191 Helianthus annuus HOM05D005097 ORTHO05D006186 2.3e-06 56.6 70 52.9


User provided reference genes

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