Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03321 Aquilegia oxysepala HOM05D006074 ORTHO05D008728 8.3e-241 836.6 427 100.0
TAR729G0002 Trochodendron aralioides HOM05D006074 ORTHO05D008728 4.1e-163 578.6 388 74.5
TAR622G0709 Trochodendron aralioides HOM05D006074 ORTHO05D008728 4.2e-160 568.5 355 78.6
PSO832G2479 Papaver somniferum HOM05D006074 ORTHO05D008728 2.2e-156 556.2 422 67.3
CSS0024892 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 1.8e-155 553.1 407 70.0
MBI02_g10680_MAGBIO Magnolia biondii HOM05D006074 ORTHO05D008728 1.8e-155 553.1 372 73.1
PSO591G0110 Papaver somniferum HOM05D006074 ORTHO05D008728 2.4e-155 552.7 382 71.2
QL02p081203 Quercus lobata HOM05D006074 ORTHO05D008728 2.4e-155 552.7 363 75.8
Lju41C23G10 Lonicera japonica HOM05D006074 ORTHO05D008728 2.9e-153 545.8 391 72.9
Actinidia02708 Actinidia chinensis HOM05D006074 ORTHO05D008728 5.0e-153 545.0 377 73.7
Hma1.2p1_0449F.1_g155300 Hydrangea macrophylla HOM05D006074 ORTHO05D008728 1.9e-152 543.1 366 74.6
CSS0026498 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 3.6e-151 538.9 376 72.9
Prupe.3G270100 Prunus persica HOM05D006074 ORTHO05D008728 8.0e-151 537.7 416 66.8
GSVIVG01011374001 Vitis vinifera HOM05D006074 ORTHO05D008728 8.0e-151 537.7 423 67.1
FAN02G2663 Fragaria x ananassa HOM05D006074 ORTHO05D008728 3.9e-150 535.4 409 68.2
FvH4_6g49080 Fragaria vesca HOM05D006074 ORTHO05D008728 6.7e-150 534.6 375 71.2
Migut.H00904 Erythranthe guttata HOM05D006074 ORTHO05D008728 2.0e-149 533.1 375 72.0
ClCG10G014940 Citrullus lanatus HOM05D006074 ORTHO05D008728 2.6e-149 532.7 368 73.1
Duzib187G1598 Durio zibethinus HOM05D006074 ORTHO05D008728 2.6e-149 532.7 431 65.4
Potri.017G080300 Populus trichocarpa HOM05D006074 ORTHO05D008728 5.7e-149 531.6 415 67.0
RcHm_v2.0_Chr2g0168871 Rosa chinensis HOM05D006074 ORTHO05D008728 9.7e-149 530.8 375 71.5
Psat1g075640 Pisum sativum HOM05D006074 ORTHO05D008728 2.8e-148 529.3 378 70.4
Medtr1g039990 Medicago truncatula HOM05D006074 ORTHO05D008728 3.7e-148 528.9 372 70.7
Thecc.04G099800 Theobroma cacao HOM05D006074 ORTHO05D008728 6.3e-148 528.1 389 69.9
CiPaw.03G029000 Carya illinoinensis HOM05D006074 ORTHO05D008728 8.2e-148 527.7 369 71.0
Sabra17G0072000 Salix brachista HOM05D006074 ORTHO05D008728 3.1e-147 525.8 370 70.5
Rhsim08G0067900 Rhododendron simsii HOM05D006074 ORTHO05D008728 7.0e-147 524.6 370 71.9
CAN.G579.8 Capsicum annuum HOM05D006074 ORTHO05D008728 1.2e-146 523.9 399 67.9
MD09G1048800 Malus domestica HOM05D006074 ORTHO05D008728 1.2e-146 523.9 411 65.5
vmacro18203 Vaccinium macrocarpon HOM05D006074 ORTHO05D008728 2.0e-146 523.1 380 69.7
ATR0564G024 Amborella trichopoda HOM05D006074 ORTHO05D008728 2.6e-146 522.7 377 70.3
MELO3C009883.2 Cucumis melo HOM05D006074 ORTHO05D008728 7.7e-146 521.2 355 73.0
CsaV3_3G041590 Cucumis sativus L. HOM05D006074 ORTHO05D008728 1.0e-145 520.8 364 71.4
Lsat_1_v5_gn_4_177200 Lactuca sativa HOM05D006074 ORTHO05D008728 1.0e-145 520.8 358 73.7
SalBow1G4287 Salvia bowleyana HOM05D006074 ORTHO05D008728 5.0e-145 518.5 403 66.0
Lj2g0007765 Lotus japonicus HOM05D006074 ORTHO05D008728 6.5e-145 518.1 385 67.8
Oeu060929.1 Olea europaea HOM05D006074 ORTHO05D008728 6.5e-145 518.1 366 71.6
Phvul.004G027100 Phaseolus vulgaris HOM05D006074 ORTHO05D008728 8.5e-145 517.7 362 70.7
Gohir.A07G215200 Gossypium hirsutum HOM05D006074 ORTHO05D008728 2.5e-144 516.2 396 67.2
Sopen03g012680 Solanum pennellii HOM05D006074 ORTHO05D008728 2.5e-144 516.2 352 73.0
PGSC0003DMG400009217 Solanum tuberosum HOM05D006074 ORTHO05D008728 2.5e-144 516.2 402 67.2
Solyc03g058860.3 Solanum lycopersicum HOM05D006074 ORTHO05D008728 1.2e-143 513.8 352 72.7
HanXRQChr09g0265461 Helianthus annuus HOM05D006074 ORTHO05D008728 1.6e-143 513.5 370 70.5
COL.COLO4_36112 Corchorus olitorius HOM05D006074 ORTHO05D008728 2.3e-142 509.6 342 74.6
Gorai.001G256400 Gossypium raimondii HOM05D006074 ORTHO05D008728 3.0e-142 509.2 430 63.3
CANSAT64G1183 Cannabis sativa HOM05D006074 ORTHO05D008728 8.8e-142 507.7 354 71.2
Dinv33738 Davidia involucrata HOM05D006074 ORTHO05D008728 8.8e-142 507.7 416 66.1
VMungo0464G0585 Vigna mungo HOM05D006074 ORTHO05D008728 8.8e-142 507.7 357 69.7
EL10Ac2g02949 Beta vulgaris HOM05D006074 ORTHO05D008728 1.2e-141 507.3 369 67.8
Lalb_Chr21g0318901 Lupinus albus HOM05D006074 ORTHO05D008728 1.5e-141 506.9 352 69.6
Sc14g0005980 Simmondsia chinensis HOM05D006074 ORTHO05D008728 4.4e-141 505.4 385 66.8
AUR62038861 Chenopodium quinoa HOM05D006074 ORTHO05D008728 4.8e-140 501.9 368 69.3
Gohir.D07G222100 Gossypium hirsutum HOM05D006074 ORTHO05D008728 6.3e-140 501.5 396 66.4
CANSAT64G2140 Cannabis sativa HOM05D006074 ORTHO05D008728 8.2e-140 501.1 354 70.9
PGR083G0972 Punica granatum HOM05D006074 ORTHO05D008728 3.1e-139 499.2 366 70.2
AUR62031615 Chenopodium quinoa HOM05D006074 ORTHO05D008728 4.1e-139 498.8 427 63.0
Nn4g23084 Nelumbo nucifera HOM05D006074 ORTHO05D008728 4.1e-139 498.8 335 72.8
arahy.Tifrunner.gnm1.ann1.V4TPJI Arachis hypogaea HOM05D006074 ORTHO05D008728 7.0e-139 498.0 370 66.8
ECA232G4667 Erigeron canadensis HOM05D006074 ORTHO05D008728 1.2e-138 497.3 346 72.8
CSS0026374 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 1.6e-138 496.9 361 70.4
arahy.Tifrunner.gnm1.ann1.1Y4ZQN Arachis hypogaea HOM05D006074 ORTHO05D008728 3.5e-138 495.7 352 69.3
CSS0037615 Camellia sinensis var. sinensis HOM05D006074 ORTHO05D008728 5.9e-138 495.0 415 63.1
Sed0009974 Sechium edule HOM05D006074 ORTHO05D008728 5.9e-138 495.0 340 70.3
THA.LOC104823933 Tarenaya hassleriana HOM05D006074 ORTHO05D008728 1.3e-137 493.8 437 60.0
Eucgr.J01218 Eucalyptus grandis HOM05D006074 ORTHO05D008728 1.7e-137 493.4 370 69.7
Atru.BG.207.p Acer truncatum HOM05D006074 ORTHO05D008728 3.8e-137 492.3 350 71.4
BcaC06g30896 Brassica carinata HOM05D006074 ORTHO05D008728 3.8e-137 492.3 353 68.6
DCAR_021653 Daucus carota HOM05D006074 ORTHO05D008728 6.5e-137 491.5 370 68.1
Aa31LG2G4460 Aethionema arabicum HOM05D006074 ORTHO05D008728 2.5e-136 489.6 354 67.8
Cc07_g03180 Coffea canephora HOM05D006074 ORTHO05D008728 2.5e-136 489.6 370 68.6
Sp2g17410 Schrenkiella parvula HOM05D006074 ORTHO05D008728 3.2e-136 489.2 353 67.7
AT3G28760 Arabidopsis thaliana HOM05D006074 ORTHO05D008728 7.2e-136 488.0 420 61.2
A06p40350 Brassica napus HOM05D006074 ORTHO05D008728 2.1e-135 486.5 387 64.3
BraA06t26953Z Brassica rapa HOM05D006074 ORTHO05D008728 2.1e-135 486.5 387 64.3
C07p37700 Brassica napus HOM05D006074 ORTHO05D008728 2.7e-135 486.1 353 68.0
BolC7t44287H Brassica oleracea HOM05D006074 ORTHO05D008728 6.1e-135 485.0 353 67.7
Carub.0005s0731 Capsella rubella HOM05D006074 ORTHO05D008728 1.0e-134 484.2 356 67.4
BcaC06g33639 Brassica carinata HOM05D006074 ORTHO05D008728 4.0e-134 482.3 374 65.0
Hund15626 Selenicereus undatus HOM05D006074 ORTHO05D008728 1.2e-133 480.7 411 64.2
Nitab4.5_0000002g0350 Nicotiana tabacum HOM05D006074 ORTHO05D008728 2.0e-133 479.9 309 75.7
AL5G18490 Arabidopsis lyrata HOM05D006074 ORTHO05D008728 2.6e-133 479.6 357 66.9
TWI34G1337 Tripterygium wilfordii HOM05D006074 ORTHO05D008728 3.4e-133 479.2 423 59.1
Nitab4.5_0003081g0050 Nicotiana tabacum HOM05D006074 ORTHO05D008728 4.4e-133 478.8 309 76.4
Cpa.g.sc14.19 Carica papaya HOM05D006074 ORTHO05D008728 2.8e-132 476.1 476 55.5
Glyma.19G020800 Glycine max HOM05D006074 ORTHO05D008728 5.0e-129 465.3 387 61.0
Zm00001eb402270 Zea mays HOM05D006074 ORTHO05D008728 4.2e-128 462.2 353 67.1
Peaxi162Scf00451g00822 Petunia axillaris HOM05D006074 ORTHO05D008728 5.5e-128 461.8 399 61.9
Os03g0170300 Oryza sativa ssp. japonica HOM05D006074 ORTHO05D008728 7.2e-128 461.5 366 65.8
TPR.G10370 Trifolium pratense HOM05D006074 ORTHO05D008728 1.3e-124 450.7 314 70.7
SGA_v2.0_scaffold59G20672 Striga asiatica HOM05D006074 ORTHO05D008728 2.2e-124 449.9 316 70.3
Ca_04272_v3 Cicer arietinum L. HOM05D006074 ORTHO05D008728 2.9e-121 439.5 315 70.5
Manes.15G177000 Manihot esculenta HOM05D006074 ORTHO05D008728 3.9e-113 412.5 271 73.4
AagrBONN_evm.TU.Sc2ySwM_228.462 Anthoceros agrestis HOM05D006074 ORTHO05D008728 6.6e-113 411.8 354 58.8
Thhalv10004593m.g Eutrema salsugineum HOM05D006074 ORTHO05D008728 4.3e-112 409.1 325 64.0
Pp3c9_19570 Physcomitrium patens HOM05D006074 ORTHO05D008728 4.0e-110 402.5 408 50.2
Pp3c10_1080 Physcomitrium patens HOM05D006074 ORTHO05D008728 1.8e-102 377.1 357 52.4
Mapoly0005s0075 Marchantia polymorpha HOM05D006074 ORTHO05D008728 2.4e-99 366.7 346 54.3
FAN14G0759 Fragaria x ananassa HOM05D006074 ORTHO05D008728 3.0e-89 333.2 433 48.5
unitig_21.g20922 Utricularia gibba HOM05D006074 ORTHO05D008728 2.4e-86 323.6 252 61.1
Pp3c15_19890 Physcomitrium patens HOM05D006074 ORTHO05D008728 4.0e-86 322.8 344 50.0
CDE02G2631 Ceratophyllum demersum HOM05D006074 ORTHO05D008728 5.3e-86 322.4 265 61.1
Glyma.13G064100 Glycine max HOM05D006074 ORTHO05D008728 2.2e-84 317.0 258 65.1
Ciclev10012867m.g Citrus clementina HOM05D006074 ORTHO05D008728 3.3e-80 303.1 186 80.6
MCO08G127 Micromonas commoda HOM05D006074 ORTHO05D008728 4.3e-72 276.2 366 44.8
Lsat_1_v5_gn_4_177220 Lactuca sativa HOM05D006074 ORTHO05D008728 1.3e-71 274.6 184 75.5
Pp3c1_20750 Physcomitrium patens HOM05D006074 ORTHO05D020966 1.1e-67 261.5 429 36.1
Pp3c1_20753 Physcomitrium patens HOM05D006074 ORTHO05D020966 1.1e-67 261.5 429 36.1
SEGI_14685 Sequoiadendron giganteum HOM05D006074 ORTHO05D008728 1.1e-67 261.5 183 66.1
Pp3c2_18540 Physcomitrium patens HOM05D006074 ORTHO05D020966 1.0e-65 255.0 464 34.1
CARHR151760 Cardamine hirsuta HOM05D006074 ORTHO05D008728 4.6e-58 229.6 207 56.0
Cre05.g248250 Chlamydomonas reinhardtii HOM05D006074 ORTHO05D008728 1.1e-56 224.9 343 41.4
Pp3c10_2120 Physcomitrium patens HOM05D006074 ORTHO05D020966 9.7e-56 221.9 518 29.2
PRCOL_00003957 Prasinoderma coloniale HOM05D006074 ORTHO05D008728 1.4e-49 201.4 364 37.6
Haze_18216 Corylus avellana HOM05D000132 ORTHO05D000058 2.0e-45 187.6 167 58.1
Lsat_1_v5_gn_0_26800 Lactuca sativa HOM05D006074 ORTHO05D008728 1.8e-41 174.5 152 55.9
Lsat_1_v5_gn_3_53141 Lactuca sativa HOM05D006074 ORTHO05D008728 1.4e-38 164.9 115 66.1
Sabra17G0081400 Salix brachista HOM05D006074 ORTHO05D008728 2.5e-19 100.9 78 66.7
Atru.chr3.96 Acer truncatum HOM05D006074 ORTHO05D026256 1.6e-18 98.2 70 68.6
Actinidia17537 Actinidia chinensis HOM05D006074 ORTHO05D026256 3.0e-17 94.0 69 69.6
Pp3c23_20410 Physcomitrium patens HOM05D006074 ORTHO05D026055 4.0e-17 93.6 172 34.3
Pp3c20_4730 Physcomitrium patens HOM05D006074 ORTHO05D026055 2.6e-16 90.9 167 36.5
PGSC0003DMG400013970 Solanum tuberosum HOM05D006074 ORTHO05D008728 3.4e-16 90.5 61 62.3
CDE02G1972 Ceratophyllum demersum HOM05D006074 ORTHO05D026256 7.5e-16 89.4 61 73.8
Pp3c8_20190 Physcomitrium patens HOM05D006074 ORTHO05D026055 1.1e-14 85.5 178 32.0
Pp3c20_10280 Physcomitrium patens HOM05D006074 ORTHO05D026055 5.9e-13 79.7 187 29.9
HanXRQChr09g0253281 Helianthus annuus HOM05D006074 ORTHO05D008728 9.5e-11 72.4 51 74.5


User provided reference genes

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