Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03288 Aquilegia oxysepala HOM05D002504 ORTHO05D007555 3.1e-221 771.5 399 100.0
TAR374G0022 Trochodendron aralioides HOM05D002504 ORTHO05D007555 1.6e-129 466.8 395 60.5
TAR622G0915 Trochodendron aralioides HOM05D002504 ORTHO05D007555 2.6e-127 459.5 395 61.3
CSS0049848 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 1.7e-118 430.3 395 55.4
CSS0041593 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 3.7e-118 429.1 395 55.2
Dinv19925 Davidia involucrata HOM05D002504 ORTHO05D007332 3.7e-118 429.1 395 56.5
Dinv09821 Davidia involucrata HOM05D002504 ORTHO05D007555 2.7e-116 422.9 395 55.7
Actinidia34980 Actinidia chinensis HOM05D002504 ORTHO05D007555 1.3e-115 420.6 395 54.7
Nn3g16999 Nelumbo nucifera HOM05D002504 ORTHO05D007555 3.3e-114 416.0 397 55.7
Rhsim12G0158700 Rhododendron simsii HOM05D002504 ORTHO05D007555 1.5e-111 407.1 395 53.7
QL10p015753 Quercus lobata HOM05D002504 ORTHO05D007555 9.8e-111 404.4 395 54.4
Haze_07368 Corylus avellana HOM05D002504 ORTHO05D007555 1.2e-108 397.5 395 53.9
Actinidia19055 Actinidia chinensis HOM05D002504 ORTHO05D007555 1.6e-108 397.1 368 54.1
QL10p005074 Quercus lobata HOM05D002504 ORTHO05D007555 3.9e-107 392.5 395 53.4
Ciclev10020527m.g Citrus clementina HOM05D002504 ORTHO05D007555 4.3e-106 389.0 389 54.0
Cfa018981 Carpinus fangiana HOM05D002504 ORTHO05D007555 5.6e-106 388.7 395 52.9
Oeu022629.1 Olea europaea HOM05D002504 ORTHO05D007555 6.2e-105 385.2 395 51.4
CiPaw.11G039400 Carya illinoinensis HOM05D002504 ORTHO05D007555 1.1e-104 384.4 379 53.8
Cpa.g.sc17.218 Carica papaya HOM05D002504 ORTHO05D007555 2.3e-104 383.3 393 49.9
TWI38G0829 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 3.1e-104 382.9 394 50.5
TPR.G5442 Trifolium pratense HOM05D002504 ORTHO05D007555 8.9e-104 381.3 396 51.8
Manes.14G075600 Manihot esculenta HOM05D002504 ORTHO05D007555 3.4e-103 379.4 394 50.8
Prupe.5G187600 Prunus persica HOM05D002504 ORTHO05D007555 4.4e-103 379.0 395 50.1
Duzib068G0930 Durio zibethinus HOM05D002504 ORTHO05D007555 9.8e-103 377.9 392 50.8
FvH4_5g15370 Fragaria vesca HOM05D002504 ORTHO05D007555 1.1e-101 374.4 396 48.7
Glyma.17G097600 Glycine max HOM05D002504 ORTHO05D007555 1.4e-101 374.0 395 52.4
RcHm_v2.0_Chr7g0180701 Rosa chinensis HOM05D002504 ORTHO05D007555 1.4e-101 374.0 395 48.4
arahy.Tifrunner.gnm1.ann1.AAW7H5 Arachis hypogaea HOM05D002504 ORTHO05D007555 1.9e-101 373.6 395 50.1
Lj4g0008726 Lotus japonicus HOM05D002504 ORTHO05D007555 2.4e-101 373.2 395 52.4
COL.COLO4_05456 Corchorus olitorius HOM05D002504 ORTHO05D007555 9.2e-101 371.3 392 51.0
FAN08G0998 Fragaria x ananassa HOM05D002504 ORTHO05D007555 9.2e-101 371.3 396 48.5
PSO832G2768 Papaver somniferum HOM05D002504 ORTHO05D007555 9.2e-101 371.3 395 51.6
ClCG01G016490 Citrullus lanatus HOM05D002504 ORTHO05D007555 1.2e-100 370.9 395 49.9
FAN18G2091 Fragaria x ananassa HOM05D002504 ORTHO05D007555 2.1e-100 370.2 396 48.2
arahy.Tifrunner.gnm1.ann1.WQI89G Arachis hypogaea HOM05D002504 ORTHO05D007555 3.5e-100 369.4 395 49.1
Medtr3g078030 Medicago truncatula HOM05D002504 ORTHO05D007555 3.5e-100 369.4 395 50.4
Cc04_g15430 Coffea canephora HOM05D002504 ORTHO05D007555 7.8e-100 368.2 394 47.7
FAN04G1481 Fragaria x ananassa HOM05D002504 ORTHO05D007555 7.8e-100 368.2 396 48.0
PSO591G0510 Papaver somniferum HOM05D002504 ORTHO05D007555 7.8e-100 368.2 395 51.1
Sed0014360 Sechium edule HOM05D002504 ORTHO05D007555 1.0e-99 367.9 396 50.5
Thecc.03G080700 Theobroma cacao HOM05D002504 ORTHO05D007555 1.0e-99 367.9 392 50.8
TWI39G0444 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 1.3e-99 367.5 394 49.5
arahy.Tifrunner.gnm1.ann1.XHUI7I Arachis hypogaea HOM05D002504 ORTHO05D007555 2.3e-99 366.7 395 48.9
FAN13G2799 Fragaria x ananassa HOM05D002504 ORTHO05D007555 3.9e-99 365.9 396 47.7
arahy.Tifrunner.gnm1.ann1.A4B6B0 Arachis hypogaea HOM05D002504 ORTHO05D007555 5.1e-99 365.5 394 48.7
Lalb_Chr12g0196751 Lupinus albus HOM05D002504 ORTHO05D007555 5.1e-99 365.5 397 49.9
TPR.G1695 Trifolium pratense HOM05D002504 ORTHO05D007555 1.9e-98 363.6 396 49.5
MELO3C007518.2 Cucumis melo HOM05D002504 ORTHO05D007555 3.3e-98 362.8 395 48.9
Gohir.D11G032900 Gossypium hirsutum HOM05D002504 ORTHO05D007555 7.3e-98 361.7 394 48.7
SalBow5G4081 Salvia bowleyana HOM05D002504 ORTHO05D007555 9.5e-98 361.3 395 48.6
VMungo1215G2696 Vigna mungo HOM05D002504 ORTHO05D007555 9.5e-98 361.3 394 49.0
Gohir.A11G029531 Gossypium hirsutum HOM05D002504 ORTHO05D007555 1.6e-97 360.5 394 48.7
Phvul.003G192200 Phaseolus vulgaris HOM05D002504 ORTHO05D007555 1.6e-97 360.5 394 49.0
Psat5g114360 Pisum sativum HOM05D002504 ORTHO05D007555 1.6e-97 360.5 394 49.5
THA.LOC104808328 Tarenaya hassleriana HOM05D002504 ORTHO05D007555 6.2e-97 358.6 393 47.6
Gorai.007G035700 Gossypium raimondii HOM05D002504 ORTHO05D007555 8.1e-97 358.2 394 48.5
CsaV3_6G042770 Cucumis sativus L. HOM05D002504 ORTHO05D007555 5.2e-96 355.5 392 48.7
CANSAT78G1429 Cannabis sativa HOM05D002504 ORTHO05D007555 6.8e-96 355.1 395 50.9
MBI03_g18947_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 6.8e-96 355.1 397 47.6
Ca_16191_v3 Cicer arietinum L. HOM05D002504 ORTHO05D007555 2.0e-95 353.6 396 48.7
Potri.015G064300 Populus trichocarpa HOM05D002504 ORTHO05D007555 2.6e-95 353.2 394 48.5
PSO063G6525 Papaver somniferum HOM05D002504 ORTHO05D007555 7.6e-95 351.7 396 51.3
Sabra15G0090100 Salix brachista HOM05D002504 ORTHO05D007555 1.4e-93 347.4 394 48.5
Atru.BG.192.p Acer truncatum HOM05D002504 ORTHO05D007555 2.4e-93 346.7 355 51.5
PGSC0003DMG400033071 Solanum tuberosum HOM05D002504 ORTHO05D007555 7.1e-93 345.1 394 48.0
Lsat_1_v5_gn_1_10961 Lactuca sativa HOM05D002504 ORTHO05D007555 2.7e-92 343.2 408 46.3
Sopen06g027310 Solanum pennellii HOM05D002504 ORTHO05D007555 1.0e-91 341.3 392 46.7
Nitab4.5_0000269g0140 Nicotiana tabacum HOM05D002504 ORTHO05D007555 2.3e-91 340.1 392 47.4
MD14G1195800 Malus domestica HOM05D002504 ORTHO05D007555 6.6e-91 338.6 397 47.1
Solyc06g071010.4 Solanum lycopersicum HOM05D002504 ORTHO05D007555 8.6e-91 338.2 392 46.7
Glyma.05G029300 Glycine max HOM05D002504 ORTHO05D007555 3.3e-90 336.3 397 47.6
MSTRG.4344 Avicennia marina HOM05D002504 ORTHO05D007555 2.1e-89 333.6 401 44.9
Nitab4.5_0007394g0010 Nicotiana tabacum HOM05D002504 ORTHO05D007555 8.1e-89 331.6 392 46.2
Sc10g0009970 Simmondsia chinensis HOM05D002504 ORTHO05D007555 1.4e-88 330.9 396 46.2
CARHR019500 Cardamine hirsuta HOM05D002504 ORTHO05D007555 3.1e-88 329.7 394 44.4
HPP92_004873 Vanilla planifolia HOM05D002504 ORTHO05D007555 3.1e-88 329.7 397 46.1
AT1G18850 Arabidopsis thaliana HOM05D002504 ORTHO05D007555 8.9e-88 328.2 399 45.4
CDE07G0237 Ceratophyllum demersum HOM05D002504 ORTHO05D007555 1.2e-87 327.8 392 48.0
PGR083G1477 Punica granatum HOM05D002504 ORTHO05D007555 2.0e-87 327.0 392 45.7
SHI03355 Sapria himalayana HOM05D002504 ORTHO05D007555 3.4e-87 326.2 396 45.5
AL1G31390 Arabidopsis lyrata HOM05D002504 ORTHO05D007555 4.4e-87 325.9 399 45.1
Peaxi162Scf00013g00007 Petunia axillaris HOM05D002504 ORTHO05D007555 1.3e-86 324.3 396 47.2
MBI11_g21312_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 2.2e-86 323.6 396 44.4
Nn5g27262 Nelumbo nucifera HOM05D002504 ORTHO05D007555 1.1e-85 321.2 275 58.9
A06p15070 Brassica napus HOM05D002504 ORTHO05D007555 1.9e-85 320.5 393 42.5
CAN.G628.37 Capsicum annuum HOM05D002504 ORTHO05D007555 2.4e-85 320.1 394 47.0
Carub.0001s1850 Capsella rubella HOM05D002504 ORTHO05D007555 5.4e-85 318.9 414 41.8
HanXRQChr06g0178031 Helianthus annuus HOM05D002504 ORTHO05D007555 7.1e-85 318.5 389 46.5
Aa31LG7G3620 Aethionema arabicum HOM05D002504 ORTHO05D007555 9.3e-85 318.2 393 44.5
BraA06t24622Z Brassica rapa HOM05D002504 ORTHO05D007555 1.2e-84 317.8 393 41.7
BcaB07g31903 Brassica carinata HOM05D002504 ORTHO05D007555 2.1e-84 317.0 413 41.9
Thhalv10007868m.g Eutrema salsugineum HOM05D002504 ORTHO05D007555 6.0e-84 315.5 393 42.7
DCAR_001955 Daucus carota HOM05D002504 ORTHO05D007555 7.8e-84 315.1 399 44.4
C05p17270 Brassica napus HOM05D002504 ORTHO05D007555 6.6e-83 312.0 415 41.0
BolC5t30427H Brassica oleracea HOM05D002504 ORTHO05D007555 6.6e-83 312.0 415 41.0
DCAR_001117 Daucus carota HOM05D002504 ORTHO05D007555 8.7e-83 311.6 391 45.3
MBI03_g28522_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 1.1e-82 311.2 396 43.2
Sp1g16830 Schrenkiella parvula HOM05D002504 ORTHO05D007555 1.5e-82 310.8 417 41.0
Migut.I00134 Erythranthe guttata HOM05D002504 ORTHO05D007555 1.9e-82 310.5 400 43.2
Lj7P436T44 Lonicera japonica HOM05D002504 ORTHO05D007555 7.3e-82 308.5 313 54.0
EL10As5g23568 Beta vulgaris HOM05D002504 ORTHO05D007555 1.3e-81 307.8 403 42.4
BcaC05g25787 Brassica carinata HOM05D002504 ORTHO05D007555 1.6e-81 307.4 415 40.2
Eucgr.A00822 Eucalyptus grandis HOM05D002504 ORTHO05D007555 6.2e-81 305.4 391 42.5
AUR62038455 Chenopodium quinoa HOM05D002504 ORTHO05D007555 9.0e-80 301.6 404 40.8
AUR62042153 Chenopodium quinoa HOM05D002504 ORTHO05D007555 5.8e-79 298.9 404 40.6
Ah.02g112510 Amaranthus hybridus HOM05D002504 ORTHO05D007555 3.8e-78 296.2 400 43.5
GSVIVG01008049001 Vitis vinifera HOM05D002504 ORTHO05D007555 1.1e-77 294.7 344 46.5
Lj5P114T15 Lonicera japonica HOM05D002504 ORTHO05D007555 4.3e-74 282.7 260 56.5
unitig_52.g17495 Utricularia gibba HOM05D002504 ORTHO05D007555 1.3e-70 271.2 396 38.6
SGA_v2.0_scaffold56G20046 Striga asiatica HOM05D002504 ORTHO05D007555 3.0e-67 260.0 333 41.4
ATR1120G016 Amborella trichopoda HOM05D002504 ORTHO05D007555 2.0e-63 247.3 423 38.3
ECA236G0190 Erigeron canadensis HOM05D002504 ORTHO05D007332 7.6e-55 218.8 281 40.6
Dinv02434 Davidia involucrata HOM05D002504 ORTHO05D007555 7.2e-53 212.2 179 60.9
Os01g0112100 Oryza sativa ssp. japonica HOM05D002504 ORTHO05D007555 2.4e-40 170.6 232 36.6
Zm00001eb126250 Zea mays HOM05D002504 ORTHO05D007555 5.1e-35 152.9 201 38.8
Zm00001eb334590 Zea mays HOM05D002504 ORTHO05D007555 5.1e-35 152.9 226 36.3
SEGI_18201 Sequoiadendron giganteum HOM05D002504 ORTHO05D007555 4.5e-31 139.8 401 29.7
Nn5g27265 Nelumbo nucifera HOM05D002504 ORTHO05D007555 2.6e-26 124.0 432 30.1
Duzib205G0461 Durio zibethinus HOM05D002504 ORTHO05D007555 1.6e-23 114.8 314 29.6
AagrBONN_evm.TU.Sc2ySwM_369.370 Anthoceros agrestis HOM05D002504 ORTHO05D007555 2.2e-22 110.9 274 28.8
Aa31LG9G8990 Aethionema arabicum HOM05D000710 ORTHO05D000336 8.0e-20 102.4 270 29.6
Pp3c1_3820 Physcomitrium patens HOM05D002504 ORTHO05D007555 2.0e-18 97.8 368 24.2
Pp3c1_3850 Physcomitrium patens HOM05D002504 ORTHO05D007555 2.0e-18 97.8 368 24.2
Mapoly0028s0021 Marchantia polymorpha HOM05D002504 ORTHO05D007555 3.4e-18 97.1 403 23.6
BcaB07g32205 Brassica carinata HOM05D002504 ORTHO05D007555 1.7e-17 94.7 393 24.9
Ciclev10033409m.g Citrus clementina HOM05D002504 ORTHO05D007555 9.1e-16 89.0 180 33.9
Sabra12G0030300 Salix brachista HOM05D002504 ORTHO05D007555 3.5e-15 87.0 179 34.6
SMO367G0630 Selaginella moellendorffii HOM05D002504 ORTHO05D007555 1.6e-12 78.2 277 26.0
arahy.Tifrunner.gnm1.ann1.8LRZ9F Arachis hypogaea HOM05D002504 ORTHO05D007555 3.6e-12 77.0 114 41.2


User provided reference genes

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