Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 2.8e-74 282.3 196 100.0
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 1.3e-39 167.2 142 61.3
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 3.9e-36 155.6 139 56.1
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 6.7e-36 154.8 139 60.4
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 4.3e-35 152.1 142 54.2
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 6.2e-34 148.3 145 55.9
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 1.8e-33 146.7 155 49.0
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 1.8e-33 146.7 147 55.1
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 2.4e-33 146.4 148 54.7
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 5.3e-33 145.2 147 53.1
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 6.9e-33 144.8 148 52.0
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 6.9e-33 144.8 147 54.4
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 1.5e-32 143.7 143 53.8
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 2.0e-32 143.3 145 53.1
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 2.0e-32 143.3 145 53.1
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 3.4e-32 142.5 152 48.0
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 4.5e-32 142.1 145 52.4
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 4.5e-32 142.1 144 50.7
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 4.5e-32 142.1 145 53.8
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 7.6e-32 141.4 147 51.7
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 7.6e-32 141.4 144 50.7
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 7.6e-32 141.4 151 50.3
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 9.9e-32 141.0 140 55.0
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.3e-31 140.6 147 50.3
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 1.3e-31 140.6 147 50.3
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 1.3e-31 140.6 141 56.7
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.7e-31 140.2 145 51.0
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 2.9e-31 139.4 145 53.8
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 2.9e-31 139.4 144 54.9
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 3.8e-31 139.0 119 58.8
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 3.8e-31 139.0 145 52.4
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 4.9e-31 138.7 146 50.7
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 6.4e-31 138.3 145 49.7
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 8.4e-31 137.9 147 51.7
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 8.4e-31 137.9 145 50.3
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 1.1e-30 137.5 140 53.6
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 1.4e-30 137.1 147 51.7
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 1.4e-30 137.1 146 50.7
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 2.5e-30 136.3 151 49.0
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 3.2e-30 136.0 148 50.7
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 4.2e-30 135.6 147 51.0
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 4.2e-30 135.6 145 49.7
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 5.5e-30 135.2 152 48.7
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 1.2e-29 134.0 146 50.0
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 1.2e-29 134.0 146 50.0
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 2.1e-29 133.3 141 55.3
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 3.5e-29 132.5 145 49.7
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 3.5e-29 132.5 154 48.1
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 3.5e-29 132.5 152 52.6
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 3.5e-29 132.5 153 48.4
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 6.0e-29 131.7 176 44.3
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 7.9e-29 131.3 157 45.2
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 7.9e-29 131.3 153 47.1
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 1.0e-28 131.0 157 47.1
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 1.3e-28 130.6 144 52.8
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 1.8e-28 130.2 121 57.9
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 3.0e-28 129.4 153 46.4
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 3.0e-28 129.4 153 46.4
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 3.0e-28 129.4 143 49.7
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 6.7e-28 128.3 143 50.3
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 6.7e-28 128.3 159 44.7
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 6.7e-28 128.3 158 46.2
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 1.1e-27 127.5 174 43.1
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 1.1e-27 127.5 157 45.9
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 1.1e-27 127.5 157 45.9
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 1.5e-27 127.1 139 49.6
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 2.5e-27 126.3 145 48.3
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 3.3e-27 125.9 174 42.5
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 9.6e-27 124.4 134 50.0
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 9.6e-27 124.4 128 50.0
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 1.6e-26 123.6 148 44.6
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 2.1e-26 123.2 162 42.6
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 2.1e-26 123.2 155 46.5
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 2.8e-26 122.9 144 47.9
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 3.7e-26 122.5 153 45.1
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 4.8e-26 122.1 154 46.1
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 4.8e-26 122.1 164 40.2
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 6.2e-26 121.7 140 49.3
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 1.4e-25 120.6 153 43.8
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 1.8e-25 120.2 164 42.7
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 1.8e-25 120.2 155 46.5
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 1.8e-25 120.2 158 43.7
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 2.4e-25 119.8 140 48.6
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 2.4e-25 119.8 153 43.8
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 3.1e-25 119.4 132 50.8
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 3.1e-25 119.4 156 43.6
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 5.3e-25 118.6 156 44.2
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 5.3e-25 118.6 152 44.1
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 1.5e-24 117.1 164 41.5
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 4.5e-24 115.5 199 39.2
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 7.6e-24 114.8 108 54.6
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 2.2e-23 113.2 149 43.0
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 4.9e-23 112.1 139 50.4
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 1.1e-22 110.9 82 68.3
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 1.9e-22 110.2 156 43.6
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 5.3e-17 92.0 147 39.5
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 1.2e-16 90.9 153 37.9
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 2.0e-16 90.1 68 63.2
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 2.9e-15 86.3 113 46.9
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 3.8e-15 85.9 69 59.4
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 5.1e-12 75.5 91 51.6
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 5.7e-11 72.0 75 53.3
Pp3c14_1800 Physcomitrium patens HOM05D030917 ORTHO05D009223 4.2e-06 55.8 146 26.7


User provided reference genes

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