Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03162 Aquilegia oxysepala HOM05D006478 ORTHO05D008071 2.0e-92 342.4 174 100.0
MD07G1255100 Malus domestica HOM05D006478 ORTHO05D008071 3.4e-23 112.5 170 38.8
Os10g0508600 Oryza sativa ssp. japonica HOM05D006478 ORTHO05D008071 3.4e-23 112.5 170 39.4
QL09p018992 Quercus lobata HOM05D006478 ORTHO05D008071 7.5e-23 111.3 170 38.8
FAN12G3923 Fragaria x ananassa HOM05D006478 ORTHO05D008071 1.3e-22 110.5 174 35.6
FvH4_4g13180 Fragaria vesca HOM05D006478 ORTHO05D008071 1.7e-22 110.2 174 36.2
Cfa008204 Carpinus fangiana HOM05D006478 ORTHO05D008071 2.8e-22 109.4 170 39.4
Ciclev10006041m.g Citrus clementina HOM05D006478 ORTHO05D008071 2.8e-22 109.4 176 39.8
FAN17G1857 Fragaria x ananassa HOM05D006478 ORTHO05D008071 2.8e-22 109.4 174 35.6
CiPaw.04G061000 Carya illinoinensis HOM05D006478 ORTHO05D008071 4.9e-22 108.6 170 38.2
Manes.14G035000 Manihot esculenta HOM05D006478 ORTHO05D008071 4.9e-22 108.6 176 39.2
Prupe.2G278900 Prunus persica HOM05D006478 ORTHO05D008071 8.3e-22 107.8 170 38.2
RcHm_v2.0_Chr4g0413311 Rosa chinensis HOM05D006478 ORTHO05D008071 1.8e-21 106.7 173 35.8
Atru.chr1.683 Acer truncatum HOM05D006478 ORTHO05D008071 2.4e-21 106.3 173 39.9
Actinidia31787 Actinidia chinensis HOM05D006478 ORTHO05D008071 5.4e-21 105.1 173 37.0
TWI23G1172 Tripterygium wilfordii HOM05D006478 ORTHO05D008071 5.4e-21 105.1 171 39.8
PSO782G1599 Papaver somniferum HOM05D006478 ORTHO05D008071 7.0e-21 104.8 163 35.0
Sed0002492 Sechium edule HOM05D006478 ORTHO05D008071 1.2e-20 104.0 174 35.6
PSO170G1682 Papaver somniferum HOM05D006478 ORTHO05D008071 1.6e-20 103.6 163 35.0
Potri.012G127100 Populus trichocarpa HOM05D006478 ORTHO05D008071 1.6e-20 103.6 171 38.0
ClCG02G008790 Citrullus lanatus HOM05D003975 ORTHO05D008071 2.7e-20 102.8 171 36.3
Nn6g34073 Nelumbo nucifera HOM05D006478 ORTHO05D008071 2.7e-20 102.8 175 38.9
Psat2g100400 Pisum sativum HOM05D006478 ORTHO05D008071 3.5e-20 102.4 178 39.3
Zm00001eb043910 Zea mays HOM05D006478 ORTHO05D008071 4.5e-20 102.1 171 36.8
CsaV3_3G016200 Cucumis sativus L. HOM05D006478 ORTHO05D008071 7.8e-20 101.3 170 34.1
MELO3C006818.2 Cucumis melo HOM05D006478 ORTHO05D008071 1.7e-19 100.1 170 33.5
Thhalv10014843m.g Eutrema salsugineum HOM05D006478 ORTHO05D008071 2.3e-19 99.8 173 35.3
AUR62015523 Chenopodium quinoa HOM05D006478 ORTHO05D008071 2.9e-19 99.4 173 36.4
AUR62002188 Chenopodium quinoa HOM05D006478 ORTHO05D008071 3.8e-19 99.0 173 35.8
Migut.O00298 Erythranthe guttata HOM05D006478 ORTHO05D008071 3.8e-19 99.0 171 36.3
Psat3g066720 Pisum sativum HOM05D006478 ORTHO05D008071 3.8e-19 99.0 178 37.6
AT5G51510 Arabidopsis thaliana HOM05D006478 ORTHO05D008071 5.0e-19 98.6 173 37.0
CSS0006490 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 5.0e-19 98.6 181 36.5
CARHR264290 Cardamine hirsuta HOM05D006478 ORTHO05D008071 5.0e-19 98.6 173 35.3
Eucgr.A02884 Eucalyptus grandis HOM05D006478 ORTHO05D008071 5.0e-19 98.6 173 33.5
Sabra12G0096300 Salix brachista HOM05D006478 ORTHO05D008071 5.0e-19 98.6 172 37.2
EL10Ac3g05828 Beta vulgaris HOM05D006478 ORTHO05D008071 6.6e-19 98.2 174 36.2
CANSAT56G4273 Cannabis sativa HOM05D006478 ORTHO05D008071 6.6e-19 98.2 170 33.5
TPR.G3657 Trifolium pratense HOM05D006478 ORTHO05D008071 6.6e-19 98.2 175 36.6
Carub.0008s1155 Capsella rubella HOM05D006478 ORTHO05D008071 8.6e-19 97.8 170 35.9
Dinv22954 Davidia involucrata HOM05D006478 ORTHO05D008071 8.6e-19 97.8 174 35.6
PGR042G2342 Punica granatum HOM05D006478 ORTHO05D008071 1.1e-18 97.4 170 32.9
Sp6g13670 Schrenkiella parvula HOM05D006478 ORTHO05D008071 1.1e-18 97.4 170 35.3
TAR629G1779 Trochodendron aralioides HOM05D006478 ORTHO05D008071 1.5e-18 97.1 120 45.8
AL8G25810 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 2.5e-18 96.3 173 36.4
CSS0007785 Camellia sinensis var. sinensis HOM05D006478 ORTHO05D008071 2.5e-18 96.3 181 35.9
CDE02G0477 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 3.3e-18 95.9 122 43.4
AL64U10030 Arabidopsis lyrata HOM05D006478 ORTHO05D008071 4.3e-18 95.5 173 36.4
THA.LOC104811518 Tarenaya hassleriana HOM05D006478 ORTHO05D008071 5.6e-18 95.1 171 35.7
Medtr3g075310 Medicago truncatula HOM05D006478 ORTHO05D008071 7.3e-18 94.7 178 37.1
Hma1.2p1_0146F.1_g065730 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 9.5e-18 94.4 177 35.6
DCAR_018100 Daucus carota HOM05D006478 ORTHO05D008071 1.2e-17 94.0 170 32.4
SalBow5G3546 Salvia bowleyana HOM05D006478 ORTHO05D008071 1.2e-17 94.0 173 32.4
SalBow5G4313 Salvia bowleyana HOM05D006478 ORTHO05D008071 1.2e-17 94.0 173 32.4
MSTRG.8414 Avicennia marina HOM05D006478 ORTHO05D008071 2.1e-17 93.2 170 31.8
Sc19g0001980 Simmondsia chinensis HOM05D006478 ORTHO05D008071 2.1e-17 93.2 173 33.5
Dinv28557 Davidia involucrata HOM05D000120 ORTHO05D000068 2.8e-17 92.8 156 36.5
Cc07_g16780 Coffea canephora HOM05D006478 ORTHO05D008071 4.7e-17 92.0 176 35.2
DCAR_028724 Daucus carota HOM05D006478 ORTHO05D008071 4.7e-17 92.0 172 33.1
FAN07G1397 Fragaria x ananassa HOM05D006478 ORTHO05D008071 4.7e-17 92.0 111 43.2
BcaB08g35507 Brassica carinata HOM05D006478 ORTHO05D008071 1.4e-16 90.5 173 33.5
Ca_03612_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 1.8e-16 90.1 178 35.4
arahy.Tifrunner.gnm1.ann1.R2ZWGQ Arachis hypogaea HOM05D006478 ORTHO05D008071 2.3e-16 89.7 179 36.3
BcaC04g20665 Brassica carinata HOM05D006478 ORTHO05D008071 4.0e-16 89.0 173 32.4
C09p40820 Brassica napus HOM05D006478 ORTHO05D008071 4.0e-16 89.0 173 32.4
BolC9t56962H Brassica oleracea HOM05D006478 ORTHO05D008071 4.0e-16 89.0 173 32.4
Lsat_1_v5_gn_8_8920 Lactuca sativa HOM05D006478 ORTHO05D008071 5.2e-16 88.6 174 32.8
GSVIVG01018613001 Vitis vinifera HOM05D006478 ORTHO05D008071 5.2e-16 88.6 180 33.3
A10p09440 Brassica napus HOM05D006478 ORTHO05D008071 6.8e-16 88.2 166 32.5
BraA10t43020Z Brassica rapa HOM05D006478 ORTHO05D008071 6.8e-16 88.2 166 32.5
CDE11G0941 Ceratophyllum demersum HOM05D006478 ORTHO05D008071 6.8e-16 88.2 106 46.2
SGA_v2.0_scaffold10G05491 Striga asiatica HOM05D006478 ORTHO05D008071 6.8e-16 88.2 177 35.6
vmacro09898 Vaccinium macrocarpon HOM05D006478 ORTHO05D008071 6.8e-16 88.2 118 44.1
HanXRQChr13g0420601 Helianthus annuus HOM05D006478 ORTHO05D008071 1.2e-15 87.4 172 33.7
arahy.Tifrunner.gnm1.ann1.LW4644 Arachis hypogaea HOM05D006478 ORTHO05D008071 2.6e-15 86.3 124 42.7
Lj6g0019546 Lotus japonicus HOM05D006478 ORTHO05D008071 4.4e-15 85.5 180 33.3
ECA233G2919 Erigeron canadensis HOM05D006478 ORTHO05D008071 7.5e-15 84.7 177 35.6
Atru.chr12.858 Acer truncatum HOM05D006478 ORTHO05D008071 9.8e-15 84.3 113 45.1
Aqoxy3G03161 Aquilegia oxysepala HOM05D006478 ORTHO05D008071 9.8e-15 84.3 140 35.7
ECA247G1821 Erigeron canadensis HOM05D006478 ORTHO05D008071 9.8e-15 84.3 170 35.3
Aa31LG3G7930 Aethionema arabicum HOM05D006478 ORTHO05D008071 2.9e-14 82.8 203 31.0
Duzib213G0671 Durio zibethinus HOM05D006478 ORTHO05D008071 3.7e-14 82.4 174 31.0
Haze_13851 Corylus avellana HOM05D006478 ORTHO05D008071 8.3e-14 81.3 170 34.1
Glyma.09G257500 Glycine max HOM05D006478 ORTHO05D008071 2.4e-13 79.7 157 33.1
Thecc.07G184100 Theobroma cacao HOM05D006478 ORTHO05D008071 2.4e-13 79.7 173 31.8
Phvul.011G177900 Phaseolus vulgaris HOM05D006478 ORTHO05D008071 3.2e-13 79.3 180 33.3
Sopen11g002780 Solanum pennellii HOM05D006478 ORTHO05D008071 3.2e-13 79.3 170 33.5
ATR0049G082 Amborella trichopoda HOM05D006478 ORTHO05D008071 4.1e-13 79.0 98 45.9
Glyma.18G235100 Glycine max HOM05D006478 ORTHO05D008071 4.1e-13 79.0 180 32.8
Nitab4.5_0001383g0120 Nicotiana tabacum HOM05D006478 ORTHO05D008071 4.1e-13 79.0 170 32.9
Lalb_Chr19g0140371 Lupinus albus HOM05D006478 ORTHO05D008071 5.4e-13 78.6 172 30.8
HPP92_021027 Vanilla planifolia HOM05D006478 ORTHO05D008071 5.4e-13 78.6 172 32.0
CAN.G645.17 Capsicum annuum HOM05D006478 ORTHO05D008071 1.6e-12 77.0 170 31.8
Gohir.A01G099000 Gossypium hirsutum HOM05D006478 ORTHO05D008071 2.0e-12 76.6 172 32.6
Peaxi162Scf00241g00526 Petunia axillaris HOM05D006478 ORTHO05D008071 1.7e-11 73.6 101 43.6
Gohir.D01G083500 Gossypium hirsutum HOM05D006478 ORTHO05D008071 3.0e-11 72.8 171 30.4
Gorai.002G109200 Gossypium raimondii HOM05D006478 ORTHO05D008071 3.0e-11 72.8 171 30.4
Hma1.2p1_0654F.1_g196670 Hydrangea macrophylla HOM05D006478 ORTHO05D008071 1.1e-10 70.9 167 28.1
Rhsim09G0192300 Rhododendron simsii HOM05D006478 ORTHO05D008071 2.5e-10 69.7 115 40.9
Mapoly0022s0103 Marchantia polymorpha HOM05D006478 ORTHO05D008071 8.0e-09 64.7 176 28.4
Pp3c3_28350 Physcomitrium patens HOM05D006478 ORTHO05D008071 1.1e-08 64.3 170 28.8
Manes.03G110816 Manihot esculenta HOM05D006478 ORTHO05D008071 1.5e-07 60.5 51 54.9
PGSC0003DMG400023983 Solanum tuberosum HOM05D006478 ORTHO05D008071 7.5e-07 58.2 173 30.1
Ca_10075_v3 Cicer arietinum L. HOM05D006478 ORTHO05D008071 1.7e-06 57.0 45 57.8
unitig_8.g3700 Utricularia gibba HOM05D006478 ORTHO05D008071 1.7e-06 57.0 149 29.5
CBR_g39926 Chara braunii HOM05D006478 ORTHO05D008071 6.4e-06 55.1 185 27.6


User provided reference genes

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