Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03110 Aquilegia oxysepala HOM05D005581 ORTHO05D006792 2.3e-116 422.2 206 100.0
TAR629G0716 Trochodendron aralioides HOM05D005581 ORTHO05D006792 7.9e-80 300.8 204 70.6
GSVIVG01032543001 Vitis vinifera HOM05D005581 ORTHO05D006792 3.0e-79 298.9 201 70.1
Lalb_Chr05g0228941 Lupinus albus HOM05D005581 ORTHO05D006792 4.3e-78 295.0 197 70.1
PSO063G2781 Papaver somniferum HOM05D005581 ORTHO05D006792 1.3e-77 293.5 175 78.3
PSO832G0275 Papaver somniferum HOM05D005581 ORTHO05D006792 2.8e-77 292.4 169 79.9
PSO591G0467 Papaver somniferum HOM05D005581 ORTHO05D006792 3.7e-77 292.0 192 72.9
Manes.15G178800 Manihot esculenta HOM05D005581 ORTHO05D006792 6.3e-77 291.2 203 67.0
Actinidia36059 Actinidia chinensis HOM05D005581 ORTHO05D006792 6.9e-76 287.7 208 65.9
Prupe.3G278300 Prunus persica HOM05D005581 ORTHO05D006792 1.2e-75 287.0 202 67.8
Aqoxy3G03108 Aquilegia oxysepala HOM05D005581 ORTHO05D006792 2.0e-75 286.2 168 80.4
Potri.001G470300 Populus trichocarpa HOM05D005581 ORTHO05D006792 2.0e-75 286.2 184 72.8
CiPaw.04G022300 Carya illinoinensis HOM05D005581 ORTHO05D006792 2.6e-75 285.8 211 65.9
Nn3g17019 Nelumbo nucifera HOM05D005581 ORTHO05D006792 3.4e-75 285.4 194 70.6
Lj2g0014392 Lotus japonicus HOM05D005581 ORTHO05D006792 1.3e-74 283.5 193 68.4
Eucgr.J02171 Eucalyptus grandis HOM05D005581 ORTHO05D006792 1.7e-74 283.1 190 70.5
RcHm_v2.0_Chr2g0170291 Rosa chinensis HOM05D005581 ORTHO05D006792 3.8e-74 282.0 201 66.7
Dinv33676 Davidia involucrata HOM05D005581 ORTHO05D006792 6.5e-74 281.2 196 65.8
Duzib187G0556 Durio zibethinus HOM05D005581 ORTHO05D006792 1.1e-73 280.4 196 67.3
COL.COLO4_06153 Corchorus olitorius HOM05D000793 ORTHO05D000783 1.4e-73 280.0 195 67.7
Actinidia06044 Actinidia chinensis HOM05D005581 ORTHO05D006792 1.9e-73 279.6 208 64.9
MBI15_g35865_MAGBIO Magnolia biondii HOM05D005581 ORTHO05D006792 2.5e-73 279.3 193 67.9
PGSC0003DMG400001392 Solanum tuberosum HOM05D005581 ORTHO05D006792 2.5e-73 279.3 199 64.8
Cfa007475 Carpinus fangiana HOM05D005581 ORTHO05D006792 3.2e-73 278.9 180 68.9
Medtr7g030020 Medicago truncatula HOM05D005581 ORTHO05D006792 3.2e-73 278.9 191 67.0
Medtr7g038730 Medicago truncatula HOM05D005581 ORTHO05D006792 3.2e-73 278.9 191 67.0
Lj2g0006948 Lotus japonicus HOM05D005581 ORTHO05D006792 4.2e-73 278.5 183 68.9
Sopen02g032000 Solanum pennellii HOM05D005581 ORTHO05D006792 5.5e-73 278.1 195 67.2
CSS0034562 Camellia sinensis var. sinensis HOM05D005581 ORTHO05D006792 7.2e-73 277.7 202 64.4
CSS0041908 Camellia sinensis var. sinensis HOM05D005581 ORTHO05D006792 7.2e-73 277.7 202 64.4
PGR083G1021 Punica granatum HOM05D005581 ORTHO05D006792 7.2e-73 277.7 193 67.9
Sc06g0002610 Simmondsia chinensis HOM05D005581 ORTHO05D006792 7.2e-73 277.7 189 69.8
Solyc02g087250.4 Solanum lycopersicum HOM05D000793 ORTHO05D000783 7.2e-73 277.7 194 67.5
MD17G1040700 Malus domestica HOM05D005581 ORTHO05D006792 9.3e-73 277.3 193 70.5
Nitab4.5_0007185g0080 Nicotiana tabacum HOM05D005581 ORTHO05D006792 9.3e-73 277.3 190 66.3
Thecc.04G002800 Theobroma cacao HOM05D005581 ORTHO05D006792 1.2e-72 276.9 200 64.5
VMungo1215G0614 Vigna mungo HOM05D005581 ORTHO05D006792 1.2e-72 276.9 207 62.3
TPR.G39154 Trifolium pratense HOM05D005581 ORTHO05D006792 1.6e-72 276.6 184 68.5
Gohir.D07G224600 Gossypium hirsutum HOM05D005581 ORTHO05D006792 2.1e-72 276.2 199 63.3
Hma1.2p1_1975F.1_g309690 Hydrangea macrophylla HOM05D005581 ORTHO05D006792 2.1e-72 276.2 198 66.7
CDE06G0044 Ceratophyllum demersum HOM05D005581 ORTHO05D006792 2.7e-72 275.8 204 65.2
Duzib147G0516 Durio zibethinus HOM05D005581 ORTHO05D006792 2.7e-72 275.8 199 64.8
Gorai.001G259000 Gossypium raimondii HOM05D005581 ORTHO05D006792 2.7e-72 275.8 192 64.1
Oeu062376.1 Olea europaea HOM05D005581 ORTHO05D006792 2.7e-72 275.8 200 66.0
Sabra16G0319200 Salix brachista HOM05D005581 ORTHO05D006792 2.7e-72 275.8 189 68.8
Nitab4.5_0004905g0030 Nicotiana tabacum HOM05D000793 ORTHO05D006792 3.6e-72 275.4 189 66.7
Gohir.A07G217500 Gossypium hirsutum HOM05D005581 ORTHO05D006792 6.1e-72 274.6 199 62.8
QL02p078462 Quercus lobata HOM05D005581 ORTHO05D006792 6.1e-72 274.6 208 65.4
RhsimUnG0168100 Rhododendron simsii HOM05D005581 ORTHO05D006792 1.8e-71 273.1 174 70.1
FAN05G2284 Fragaria x ananassa HOM05D005581 ORTHO05D006792 2.3e-71 272.7 193 66.8
MELO3C033644.2 Cucumis melo HOM05D005581 ORTHO05D006792 3.0e-71 272.3 201 66.7
FvH4_6g50030 Fragaria vesca HOM05D005581 ORTHO05D006792 3.0e-71 272.3 193 66.8
FAN09G0871 Fragaria x ananassa HOM05D005581 ORTHO05D006792 3.0e-71 272.3 193 66.8
FAN14G0942 Fragaria x ananassa HOM05D005581 ORTHO05D006792 3.0e-71 272.3 193 66.8
Ciclev10012718m.g Citrus clementina HOM05D005581 ORTHO05D006792 3.9e-71 271.9 198 64.6
SHI25585 Sapria himalayana HOM05D005581 ORTHO05D006792 5.1e-71 271.6 198 65.7
arahy.Tifrunner.gnm1.ann1.E9CGF1 Arachis hypogaea HOM05D005581 ORTHO05D006792 6.7e-71 271.2 188 66.5
arahy.Tifrunner.gnm1.ann1.2M0NJC Arachis hypogaea HOM05D005581 ORTHO05D006792 8.7e-71 270.8 206 62.6
Ciclev10016724m.g Citrus clementina HOM05D005581 ORTHO05D006792 1.1e-70 270.4 198 65.7
CsaV3_5G037490 Cucumis sativus L. HOM05D005581 ORTHO05D006792 1.1e-70 270.4 201 65.7
Phvul.003G125600 Phaseolus vulgaris HOM05D005581 ORTHO05D006792 1.1e-70 270.4 199 64.3
ATR0624G029 Amborella trichopoda HOM05D005581 ORTHO05D006792 1.9e-70 269.6 168 74.4
Peaxi162Scf00129g00828 Petunia axillaris HOM05D000793 ORTHO05D000783 1.9e-70 269.6 188 64.9
Lalb_Chr21g0319231 Lupinus albus HOM05D005581 ORTHO05D006792 2.5e-70 269.2 197 67.5
CAN.G206.63 Capsicum annuum HOM05D005581 ORTHO05D006792 3.3e-70 268.9 181 66.9
Oeu031508.1 Olea europaea HOM05D005581 ORTHO05D006792 3.3e-70 268.9 180 67.8
Glyma.13G116200 Glycine max HOM05D005581 ORTHO05D006792 5.7e-70 268.1 185 64.3
SGA_v2.0_scaffold135G34832 Striga asiatica HOM05D005581 ORTHO05D006792 7.4e-70 267.7 204 63.7
MSTRG.23979 Avicennia marina HOM05D005581 ORTHO05D006792 9.7e-70 267.3 180 68.3
Sed0016453 Sechium edule HOM05D005581 ORTHO05D006792 1.3e-69 266.9 198 66.2
Cpa.g.sc14.80 Carica papaya HOM05D005581 ORTHO05D006792 2.2e-69 266.2 196 63.3
Hma1.2p1_0375F.1_g139010 Hydrangea macrophylla HOM05D005581 ORTHO05D006792 4.8e-69 265.0 192 65.1
Hund12510 Selenicereus undatus HOM05D005581 ORTHO05D006792 6.3e-69 264.6 181 68.5
arahy.Tifrunner.gnm1.ann1.B679M5 Arachis hypogaea HOM05D005581 ORTHO05D006792 8.2e-69 264.2 188 64.9
Gohir.A05G361700 Gossypium hirsutum HOM05D005581 ORTHO05D006792 8.2e-69 264.2 195 63.1
PSO832G2358 Papaver somniferum HOM05D005581 ORTHO05D006792 8.2e-69 264.2 201 65.2
arahy.Tifrunner.gnm1.ann1.UYM2HQ Arachis hypogaea HOM05D005581 ORTHO05D006792 2.4e-68 262.7 191 64.4
Gorai.012G059200 Gossypium raimondii HOM05D005581 ORTHO05D006792 3.1e-68 262.3 198 62.1
Ca_19611_v3 Cicer arietinum L. HOM05D005581 ORTHO05D006792 4.1e-68 261.9 194 65.5
Gohir.D04G052800 Gossypium hirsutum HOM05D005581 ORTHO05D006792 5.3e-68 261.5 198 61.6
TWI12G0742 Tripterygium wilfordii HOM05D005581 ORTHO05D006792 5.3e-68 261.5 192 64.1
HPP92_026859 Vanilla planifolia HOM05D005581 ORTHO05D006792 5.3e-68 261.5 189 64.6
EL10Ac7g18001 Beta vulgaris HOM05D005581 ORTHO05D006792 1.5e-67 260.0 201 63.7
Psat3g165640 Pisum sativum HOM05D005581 ORTHO05D006792 3.4e-67 258.8 188 63.3
Atru.BG.224.p Acer truncatum HOM05D005581 ORTHO05D006792 4.5e-67 258.5 165 72.1
Zm00001eb279970 Zea mays HOM05D005581 ORTHO05D006792 5.9e-67 258.1 190 64.2
SalBow1G8695 Salvia bowleyana HOM05D005581 ORTHO05D006792 7.7e-67 257.7 194 63.9
Os06g0238300 Oryza sativa ssp. japonica HOM05D005581 ORTHO05D006792 1.3e-66 256.9 170 68.2
Carub.0003s2629 Capsella rubella HOM05D005581 ORTHO05D006792 2.9e-66 255.8 191 66.0
Lsat_1_v5_gn_0_16520 Lactuca sativa HOM05D005581 ORTHO05D006792 2.9e-66 255.8 202 60.9
AUR62022121 Chenopodium quinoa HOM05D005581 ORTHO05D006792 3.8e-66 255.4 196 60.2
AT2G04690 Arabidopsis thaliana HOM05D005581 ORTHO05D006792 5.0e-66 255.0 177 66.1
CARHR102620 Cardamine hirsuta HOM05D005581 ORTHO05D006792 1.4e-65 253.4 188 62.8
ClCG00G001710 Citrullus lanatus HOM05D005581 ORTHO05D006792 2.5e-65 252.7 209 59.8
ClCG09G018630 Citrullus lanatus HOM05D005581 ORTHO05D006792 2.5e-65 252.7 209 59.8
ECA240G2828 Erigeron canadensis HOM05D005581 ORTHO05D006792 3.2e-65 252.3 196 59.2
Migut.H00163 Erythranthe guttata HOM05D005581 ORTHO05D006792 3.2e-65 252.3 185 62.7
AL3G42310 Arabidopsis lyrata HOM05D005581 ORTHO05D006792 4.2e-65 251.9 171 68.4
AUR62001208 Chenopodium quinoa HOM05D005581 ORTHO05D006792 1.2e-64 250.4 176 65.9
DCAR_003657 Daucus carota HOM05D005581 ORTHO05D006792 1.6e-64 250.0 179 63.7
Hund20033 Selenicereus undatus HOM05D005581 ORTHO05D006792 1.6e-64 250.0 187 63.1
DCAR_011192 Daucus carota HOM05D005581 ORTHO05D006792 2.3e-63 246.1 204 59.8
Sp7g01930 Schrenkiella parvula HOM05D005581 ORTHO05D006792 3.3e-62 242.3 175 64.6
Thhalv10027934m.g Eutrema salsugineum HOM05D005581 ORTHO05D006792 2.2e-61 239.6 175 63.4
SEGI_16176 Sequoiadendron giganteum HOM05D005581 ORTHO05D006792 2.8e-61 239.2 196 56.1
THA.LOC104823921 Tarenaya hassleriana HOM05D005581 ORTHO05D006792 3.1e-60 235.7 194 60.3
EL10Ac7g18000 Beta vulgaris HOM05D005581 ORTHO05D006792 9.1e-60 234.2 205 56.1
BcaB06g27424 Brassica carinata HOM05D005581 ORTHO05D006792 2.6e-59 232.6 190 60.5
vmacro05787 Vaccinium macrocarpon HOM05D005581 ORTHO05D006792 3.4e-59 232.3 153 69.3
BraA04t16955Z Brassica rapa HOM05D005581 ORTHO05D006792 5.9e-59 231.5 190 61.1
Lj7A408G12 Lonicera japonica HOM05D005581 ORTHO05D006792 5.9e-59 231.5 146 70.5
A04p12950 Brassica napus HOM05D005581 ORTHO05D006792 1.7e-58 229.9 190 60.5
C04p46650 Brassica napus HOM05D005581 ORTHO05D006792 2.2e-58 229.6 190 60.0
BolC4t26253H Brassica oleracea HOM05D005581 ORTHO05D006792 2.2e-58 229.6 190 60.0
TWI12G0286 Tripterygium wilfordii HOM05D005581 ORTHO05D006792 1.9e-57 226.5 189 60.8
AagrBONN_evm.TU.Sc2ySwM_368.1768 Anthoceros agrestis HOM05D005581 ORTHO05D006792 2.7e-56 222.6 191 56.5
MD09G1040100 Malus domestica HOM05D005581 ORTHO05D006792 3.3e-54 215.7 277 43.7
Atru.chr8.2410 Acer truncatum HOM05D005581 ORTHO05D006792 4.8e-53 211.8 129 72.9
SMO356G0730 Selaginella moellendorffii HOM05D005581 ORTHO05D006792 1.1e-52 210.7 187 55.1
Psat3g011960 Pisum sativum HOM05D005581 ORTHO05D006792 5.3e-52 208.4 152 67.8
Cc07_g02660 Coffea canephora HOM05D005581 ORTHO05D006792 1.5e-49 200.3 159 62.9
Mapoly0035s0056 Marchantia polymorpha HOM05D005581 ORTHO05D006792 8.0e-48 194.5 187 49.2
Aa31LG9G1540 Aethionema arabicum HOM05D005581 ORTHO05D006792 1.4e-47 193.7 154 64.3
Pp3c1_40840 Physcomitrium patens HOM05D005581 ORTHO05D006792 2.6e-46 189.5 187 50.8
Haze_14640 Corylus avellana HOM05D005581 ORTHO05D006792 3.8e-42 175.6 125 65.6
CBR_g36833 Chara braunii HOM05D005581 ORTHO05D006792 4.8e-37 158.7 156 51.3
MSTRG.21916 Avicennia marina HOM05D005581 ORTHO05D006792 5.9e-35 151.8 168 49.4
PRCOL_00005184 Prasinoderma coloniale HOM05D005581 ORTHO05D006792 1.3e-34 150.6 168 43.5
Migut.N00270 Erythranthe guttata HOM05D005581 ORTHO05D006792 1.1e-33 147.5 189 44.4
Migut.H00162 Erythranthe guttata HOM05D005581 ORTHO05D006792 2.6e-30 136.3 159 42.8
Migut.H00166 Erythranthe guttata HOM05D005581 ORTHO05D006792 1.8e-28 130.2 159 43.4
SalBow3G2496 Salvia bowleyana HOM05D005581 ORTHO05D006792 2.7e-27 126.3 166 41.0
Cre10.g440700 Chlamydomonas reinhardtii HOM05D005581 ORTHO05D006792 4.5e-27 125.6 189 33.9
Glyma.17G043600 Glycine max HOM05D005581 ORTHO05D006792 7.3e-25 118.2 78 62.8
HPP92_018422 Vanilla planifolia HOM05D005581 ORTHO05D006792 1.2e-19 100.9 63 65.1
PRCOL_00002387 Prasinoderma coloniale HOM05D005581 ORTHO05D006792 3.9e-18 95.9 192 33.9
HanXRQChr17g0548091 Helianthus annuus HOM05D005581 ORTHO05D006792 1.3e-13 80.9 65 55.4
CDE06G0755 Ceratophyllum demersum HOM05D005581 ORTHO05D006792 7.0e-12 75.1 55 67.3
arahy.Tifrunner.gnm1.ann1.C3UJQ4 Arachis hypogaea HOM05D005581 ORTHO05D006792 6.6e-10 68.6 71 49.3
MBI15_g46244_MAGBIO Magnolia biondii HOM05D005581 ORTHO05D006792 6.6e-10 68.6 58 58.6


User provided reference genes

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