Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03108 Aquilegia oxysepala HOM05D005581 ORTHO05D006792 2.0e-112 409.1 197 100.0
Nn3g17019 Nelumbo nucifera HOM05D005581 ORTHO05D006792 1.2e-77 293.5 167 81.4
MBI15_g35865_MAGBIO Magnolia biondii HOM05D005581 ORTHO05D006792 1.9e-75 286.2 168 78.6
Aqoxy3G03110 Aquilegia oxysepala HOM05D005581 ORTHO05D006792 4.3e-75 285.0 168 80.4
TAR629G0716 Trochodendron aralioides HOM05D005581 ORTHO05D006792 7.3e-75 284.3 168 78.6
GSVIVG01032543001 Vitis vinifera HOM05D005581 ORTHO05D006792 7.3e-75 284.3 168 78.0
PSO591G0467 Papaver somniferum HOM05D005581 ORTHO05D006792 2.8e-74 282.3 167 78.4
PSO832G0275 Papaver somniferum HOM05D005581 ORTHO05D006792 4.7e-74 281.6 167 77.8
QL02p078462 Quercus lobata HOM05D005581 ORTHO05D006792 1.4e-73 280.0 170 77.1
PSO063G2781 Papaver somniferum HOM05D005581 ORTHO05D006792 1.5e-72 276.6 171 74.9
Cfa007475 Carpinus fangiana HOM05D005581 ORTHO05D006792 2.0e-72 276.2 171 72.5
Lj2g0014392 Lotus japonicus HOM05D005581 ORTHO05D006792 2.0e-72 276.2 168 75.0
Lj2g0006948 Lotus japonicus HOM05D005581 ORTHO05D006792 9.9e-72 273.9 168 74.4
CDE06G0044 Ceratophyllum demersum HOM05D005581 ORTHO05D006792 1.7e-71 273.1 168 75.6
RcHm_v2.0_Chr2g0170291 Rosa chinensis HOM05D005581 ORTHO05D006792 1.7e-71 273.1 166 76.5
CiPaw.04G022300 Carya illinoinensis HOM05D005581 ORTHO05D006792 3.8e-71 271.9 167 75.4
arahy.Tifrunner.gnm1.ann1.B679M5 Arachis hypogaea HOM05D005581 ORTHO05D006792 4.9e-71 271.6 168 72.6
Hma1.2p1_1975F.1_g309690 Hydrangea macrophylla HOM05D005581 ORTHO05D006792 4.9e-71 271.6 166 74.1
PGR083G1021 Punica granatum HOM05D005581 ORTHO05D006792 4.9e-71 271.6 168 74.4
Prupe.3G278300 Prunus persica HOM05D005581 ORTHO05D006792 6.4e-71 271.2 165 75.8
arahy.Tifrunner.gnm1.ann1.UYM2HQ Arachis hypogaea HOM05D005581 ORTHO05D006792 1.1e-70 270.4 168 72.0
TPR.G39154 Trifolium pratense HOM05D005581 ORTHO05D006792 1.1e-70 270.4 169 72.2
Lalb_Chr05g0228941 Lupinus albus HOM05D005581 ORTHO05D006792 1.4e-70 270.0 166 74.7
Potri.001G470300 Populus trichocarpa HOM05D005581 ORTHO05D006792 1.4e-70 270.0 166 73.5
ATR0624G029 Amborella trichopoda HOM05D005581 ORTHO05D006792 3.2e-70 268.9 175 72.6
Sc06g0002610 Simmondsia chinensis HOM05D005581 ORTHO05D006792 9.3e-70 267.3 166 72.9
Eucgr.J02171 Eucalyptus grandis HOM05D005581 ORTHO05D006792 1.2e-69 266.9 166 75.3
RhsimUnG0168100 Rhododendron simsii HOM05D005581 ORTHO05D006792 2.1e-69 266.2 167 72.5
Hund12510 Selenicereus undatus HOM05D005581 ORTHO05D006792 2.1e-69 266.2 166 73.5
Manes.15G178800 Manihot esculenta HOM05D005581 ORTHO05D006792 2.7e-69 265.8 164 73.8
Medtr7g030020 Medicago truncatula HOM05D005581 ORTHO05D006792 3.5e-69 265.4 169 70.4
Medtr7g038730 Medicago truncatula HOM05D005581 ORTHO05D006792 3.5e-69 265.4 169 70.4
MD17G1040700 Malus domestica HOM05D005581 ORTHO05D006792 6.0e-69 264.6 171 73.1
SHI25585 Sapria himalayana HOM05D005581 ORTHO05D006792 6.0e-69 264.6 173 72.3
Dinv33676 Davidia involucrata HOM05D005581 ORTHO05D006792 1.3e-68 263.5 166 71.7
FvH4_6g50030 Fragaria vesca HOM05D005581 ORTHO05D006792 1.3e-68 263.5 166 74.7
FAN05G2284 Fragaria x ananassa HOM05D005581 ORTHO05D006792 1.3e-68 263.5 166 74.7
FAN09G0871 Fragaria x ananassa HOM05D005581 ORTHO05D006792 1.3e-68 263.5 166 74.7
FAN14G0942 Fragaria x ananassa HOM05D005581 ORTHO05D006792 1.3e-68 263.5 166 74.7
Lalb_Chr21g0319231 Lupinus albus HOM05D005581 ORTHO05D006792 1.3e-68 263.5 173 70.5
Actinidia36059 Actinidia chinensis HOM05D005581 ORTHO05D006792 2.3e-68 262.7 166 72.3
MELO3C033644.2 Cucumis melo HOM05D005581 ORTHO05D006792 2.3e-68 262.7 166 73.5
Duzib147G0516 Durio zibethinus HOM05D005581 ORTHO05D006792 2.3e-68 262.7 166 72.3
Actinidia06044 Actinidia chinensis HOM05D005581 ORTHO05D006792 3.0e-68 262.3 166 72.3
Ciclev10012718m.g Citrus clementina HOM05D005581 ORTHO05D006792 3.0e-68 262.3 167 71.3
COL.COLO4_06153 Corchorus olitorius HOM05D000793 ORTHO05D000783 3.0e-68 262.3 168 70.8
Sabra16G0319200 Salix brachista HOM05D005581 ORTHO05D006792 3.0e-68 262.3 166 71.1
Ciclev10016724m.g Citrus clementina HOM05D005581 ORTHO05D006792 3.9e-68 261.9 167 71.3
Duzib187G0556 Durio zibethinus HOM05D005581 ORTHO05D006792 6.6e-68 261.2 167 70.7
Thecc.04G002800 Theobroma cacao HOM05D005581 ORTHO05D006792 8.7e-68 260.8 166 71.1
VMungo1215G0614 Vigna mungo HOM05D005581 ORTHO05D006792 8.7e-68 260.8 168 69.6
PSO832G2358 Papaver somniferum HOM05D005581 ORTHO05D006792 4.3e-67 258.5 171 71.3
CSS0034562 Camellia sinensis var. sinensis HOM05D005581 ORTHO05D006792 5.6e-67 258.1 166 71.1
CSS0041908 Camellia sinensis var. sinensis HOM05D005581 ORTHO05D006792 5.6e-67 258.1 166 71.1
Phvul.003G125600 Phaseolus vulgaris HOM05D005581 ORTHO05D006792 5.6e-67 258.1 171 69.0
arahy.Tifrunner.gnm1.ann1.2M0NJC Arachis hypogaea HOM05D005581 ORTHO05D006792 9.6e-67 257.3 168 69.6
TWI12G0742 Tripterygium wilfordii HOM05D005581 ORTHO05D006792 9.6e-67 257.3 167 70.7
Glyma.13G116200 Glycine max HOM05D005581 ORTHO05D006792 1.3e-66 256.9 168 69.0
Cpa.g.sc14.80 Carica papaya HOM05D005581 ORTHO05D006792 1.6e-66 256.5 166 71.1
CsaV3_5G037490 Cucumis sativus L. HOM05D005581 ORTHO05D006792 1.6e-66 256.5 166 71.1
arahy.Tifrunner.gnm1.ann1.E9CGF1 Arachis hypogaea HOM05D005581 ORTHO05D006792 2.1e-66 256.1 168 69.6
Ca_19611_v3 Cicer arietinum L. HOM05D005581 ORTHO05D006792 2.1e-66 256.1 167 70.7
Gohir.A07G217500 Gossypium hirsutum HOM05D005581 ORTHO05D006792 2.8e-66 255.8 167 68.9
Gohir.D07G224600 Gossypium hirsutum HOM05D005581 ORTHO05D006792 2.8e-66 255.8 167 68.9
Gorai.001G259000 Gossypium raimondii HOM05D005581 ORTHO05D006792 2.8e-66 255.8 167 68.9
Gorai.012G059200 Gossypium raimondii HOM05D005581 ORTHO05D006792 2.8e-66 255.8 166 68.7
Sed0016453 Sechium edule HOM05D005581 ORTHO05D006792 2.8e-66 255.8 166 71.1
Sopen02g032000 Solanum pennellii HOM05D005581 ORTHO05D006792 3.6e-66 255.4 167 69.5
Peaxi162Scf00129g00828 Petunia axillaris HOM05D000793 ORTHO05D000783 4.8e-66 255.0 167 68.9
Oeu031508.1 Olea europaea HOM05D005581 ORTHO05D006792 8.1e-66 254.2 165 70.9
PGSC0003DMG400001392 Solanum tuberosum HOM05D005581 ORTHO05D006792 8.1e-66 254.2 167 68.9
Gohir.A05G361700 Gossypium hirsutum HOM05D005581 ORTHO05D006792 1.1e-65 253.8 166 68.7
Gohir.D04G052800 Gossypium hirsutum HOM05D005581 ORTHO05D006792 1.4e-65 253.4 166 67.5
Solyc02g087250.4 Solanum lycopersicum HOM05D000793 ORTHO05D000783 1.4e-65 253.4 167 68.9
Nitab4.5_0007185g0080 Nicotiana tabacum HOM05D005581 ORTHO05D006792 1.8e-65 253.1 167 68.3
Psat3g165640 Pisum sativum HOM05D005581 ORTHO05D006792 1.8e-65 253.1 165 69.7
Atru.BG.224.p Acer truncatum HOM05D005581 ORTHO05D006792 2.4e-65 252.7 165 71.5
Nitab4.5_0004905g0030 Nicotiana tabacum HOM05D000793 ORTHO05D006792 2.4e-65 252.7 167 68.3
Hma1.2p1_0375F.1_g139010 Hydrangea macrophylla HOM05D005581 ORTHO05D006792 3.1e-65 252.3 167 67.1
EL10Ac7g18001 Beta vulgaris HOM05D005581 ORTHO05D006792 9.0e-65 250.8 187 64.7
Os06g0238300 Oryza sativa ssp. japonica HOM05D005581 ORTHO05D006792 1.2e-64 250.4 175 64.6
AL3G42310 Arabidopsis lyrata HOM05D005581 ORTHO05D006792 1.5e-64 250.0 166 70.5
MSTRG.23979 Avicennia marina HOM05D005581 ORTHO05D006792 1.5e-64 250.0 166 68.7
CARHR102620 Cardamine hirsuta HOM05D005581 ORTHO05D006792 1.5e-64 250.0 166 71.7
SGA_v2.0_scaffold135G34832 Striga asiatica HOM05D005581 ORTHO05D006792 2.0e-64 249.6 166 71.7
HPP92_026859 Vanilla planifolia HOM05D005581 ORTHO05D006792 2.0e-64 249.6 166 68.1
Carub.0003s2629 Capsella rubella HOM05D005581 ORTHO05D006792 5.8e-64 248.1 166 71.1
Oeu062376.1 Olea europaea HOM05D005581 ORTHO05D006792 5.8e-64 248.1 165 69.7
DCAR_003657 Daucus carota HOM05D005581 ORTHO05D006792 3.8e-63 245.4 170 65.3
Zm00001eb279970 Zea mays HOM05D005581 ORTHO05D006792 3.8e-63 245.4 174 63.8
ClCG00G001710 Citrullus lanatus HOM05D005581 ORTHO05D006792 4.9e-63 245.0 182 65.4
ClCG09G018630 Citrullus lanatus HOM05D005581 ORTHO05D006792 4.9e-63 245.0 182 65.4
CAN.G206.63 Capsicum annuum HOM05D005581 ORTHO05D006792 6.4e-63 244.6 167 65.9
AUR62022121 Chenopodium quinoa HOM05D005581 ORTHO05D006792 1.1e-62 243.8 167 68.9
AT2G04690 Arabidopsis thaliana HOM05D005581 ORTHO05D006792 1.4e-62 243.4 166 68.1
AUR62001208 Chenopodium quinoa HOM05D005581 ORTHO05D006792 4.2e-62 241.9 167 68.3
DCAR_011192 Daucus carota HOM05D005581 ORTHO05D006792 1.2e-61 240.4 182 63.7
SEGI_16176 Sequoiadendron giganteum HOM05D005581 ORTHO05D006792 1.6e-61 240.0 173 63.6
SalBow1G8695 Salvia bowleyana HOM05D005581 ORTHO05D006792 2.7e-61 239.2 169 66.9
Migut.H00163 Erythranthe guttata HOM05D005581 ORTHO05D006792 3.5e-61 238.8 167 65.3
Lsat_1_v5_gn_0_16520 Lactuca sativa HOM05D005581 ORTHO05D006792 4.6e-61 238.4 179 61.5
TWI12G0286 Tripterygium wilfordii HOM05D005581 ORTHO05D006792 6.0e-61 238.0 170 67.6
ECA240G2828 Erigeron canadensis HOM05D005581 ORTHO05D006792 3.0e-60 235.7 172 62.2
Sp7g01930 Schrenkiella parvula HOM05D005581 ORTHO05D006792 2.5e-59 232.6 167 66.5
Hund20033 Selenicereus undatus HOM05D005581 ORTHO05D006792 3.3e-59 232.3 167 65.9
Thhalv10027934m.g Eutrema salsugineum HOM05D005581 ORTHO05D006792 2.1e-58 229.6 167 65.3
vmacro05787 Vaccinium macrocarpon HOM05D005581 ORTHO05D006792 2.8e-58 229.2 150 71.3
THA.LOC104823921 Tarenaya hassleriana HOM05D005581 ORTHO05D006792 3.1e-57 225.7 166 65.7
EL10Ac7g18000 Beta vulgaris HOM05D005581 ORTHO05D006792 5.3e-57 224.9 168 64.3
BcaB06g27424 Brassica carinata HOM05D005581 ORTHO05D006792 6.9e-57 224.6 167 65.3
Lj7A408G12 Lonicera japonica HOM05D005581 ORTHO05D006792 2.6e-56 222.6 142 70.4
A04p12950 Brassica napus HOM05D005581 ORTHO05D006792 3.4e-56 222.2 167 63.5
C04p46650 Brassica napus HOM05D005581 ORTHO05D006792 3.4e-56 222.2 167 63.5
BolC4t26253H Brassica oleracea HOM05D005581 ORTHO05D006792 3.4e-56 222.2 167 63.5
BraA04t16955Z Brassica rapa HOM05D005581 ORTHO05D006792 9.9e-56 220.7 167 63.5
AagrBONN_evm.TU.Sc2ySwM_368.1768 Anthoceros agrestis HOM05D005581 ORTHO05D006792 7.1e-54 214.5 180 56.7
MD09G1040100 Malus domestica HOM05D005581 ORTHO05D006792 3.5e-53 212.2 276 44.9
Psat3g011960 Pisum sativum HOM05D005581 ORTHO05D006792 1.0e-52 210.7 131 77.1
SMO356G0730 Selaginella moellendorffii HOM05D005581 ORTHO05D006792 2.5e-51 206.1 171 55.0
Cc07_g02660 Coffea canephora HOM05D005581 ORTHO05D006792 4.0e-49 198.7 131 71.8
Atru.chr8.2410 Acer truncatum HOM05D005581 ORTHO05D006792 9.0e-49 197.6 127 70.1
Aa31LG9G1540 Aethionema arabicum HOM05D005581 ORTHO05D006792 1.2e-48 197.2 131 75.6
Mapoly0035s0056 Marchantia polymorpha HOM05D005581 ORTHO05D006792 1.2e-48 197.2 164 56.1
Pp3c1_40840 Physcomitrium patens HOM05D005581 ORTHO05D006792 1.9e-46 189.9 169 55.0
Haze_14640 Corylus avellana HOM05D005581 ORTHO05D006792 1.8e-44 183.3 103 81.6
PRCOL_00005184 Prasinoderma coloniale HOM05D005581 ORTHO05D006792 9.7e-35 151.0 165 43.0
CBR_g36833 Chara braunii HOM05D005581 ORTHO05D006792 1.6e-34 150.2 156 46.8
MSTRG.21916 Avicennia marina HOM05D005581 ORTHO05D006792 1.4e-33 147.1 166 48.8
Migut.N00270 Erythranthe guttata HOM05D005581 ORTHO05D006792 2.0e-32 143.3 178 44.9
Migut.H00162 Erythranthe guttata HOM05D005581 ORTHO05D006792 1.4e-28 130.6 154 43.5
Migut.H00166 Erythranthe guttata HOM05D005581 ORTHO05D006792 1.1e-27 127.5 160 42.5
Cre10.g440700 Chlamydomonas reinhardtii HOM05D005581 ORTHO05D006792 1.4e-25 120.6 176 36.4
SalBow3G2496 Salvia bowleyana HOM05D005581 ORTHO05D006792 5.0e-23 112.1 156 41.7
Glyma.17G043600 Glycine max HOM05D005581 ORTHO05D006792 6.5e-23 111.7 76 63.2
HPP92_018422 Vanilla planifolia HOM05D005581 ORTHO05D006792 1.3e-15 87.4 63 55.6
PRCOL_00002387 Prasinoderma coloniale HOM05D005581 ORTHO05D006792 7.2e-14 81.6 160 31.9
HanXRQChr17g0548091 Helianthus annuus HOM05D005581 ORTHO05D006792 3.9e-12 75.9 68 50.0
CDE06G0755 Ceratophyllum demersum HOM05D005581 ORTHO05D006792 1.1e-11 74.3 102 45.1
MBI15_g46244_MAGBIO Magnolia biondii HOM05D005581 ORTHO05D006792 1.1e-09 67.8 36 83.3
arahy.Tifrunner.gnm1.ann1.C3UJQ4 Arachis hypogaea HOM05D005581 ORTHO05D006792 1.3e-07 60.8 70 45.7


User provided reference genes

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