Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03086 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 8.6e-131 470.3 236 100.0
Aqoxy3G03085 Aquilegia oxysepala HOM05D006272 ORTHO05D007989 1.2e-124 449.9 237 97.0
PSO832G1007 Papaver somniferum HOM05D006272 ORTHO05D007989 5.3e-72 275.0 239 61.9
PSO063G7353 Papaver somniferum HOM05D006272 ORTHO05D007989 1.4e-69 266.9 228 62.3
Haze_07447 Corylus avellana HOM05D006272 ORTHO05D007989 5.1e-67 258.5 234 59.0
Manes.14G069600 Manihot esculenta HOM05D006272 ORTHO05D007989 6.3e-65 251.5 236 60.2
Glyma.04G179400 Glycine max HOM05D006272 ORTHO05D007989 1.8e-64 250.0 215 62.3
QL10p013391 Quercus lobata HOM05D006272 ORTHO05D007989 2.4e-64 249.6 235 60.0
GSVIVG01007814001 Vitis vinifera HOM05D006272 ORTHO05D007989 2.4e-64 249.6 210 63.3
Duzib205G0574 Durio zibethinus HOM05D006272 ORTHO05D007989 3.1e-64 249.2 235 56.2
Lj1g0014498 Lotus japonicus HOM05D006272 ORTHO05D007989 5.3e-64 248.4 164 74.4
Ca_16206_v3 Cicer arietinum L. HOM05D006272 ORTHO05D007989 7.0e-64 248.1 165 73.9
Gohir.D03G150700 Gossypium hirsutum HOM05D006272 ORTHO05D007989 9.1e-64 247.7 241 55.6
CiPaw.12G023800 Carya illinoinensis HOM05D006272 ORTHO05D007989 1.2e-63 247.3 235 57.4
Glyma.06G185200 Glycine max HOM05D006272 ORTHO05D007989 3.5e-63 245.7 164 72.6
TAR622G0996 Trochodendron aralioides HOM05D006272 ORTHO05D007989 4.5e-63 245.4 226 62.4
Phvul.009G181400 Phaseolus vulgaris HOM05D006272 ORTHO05D007989 5.9e-63 245.0 203 63.5
TPR.G15079 Trifolium pratense HOM05D006272 ORTHO05D007989 5.9e-63 245.0 166 72.9
Psat5g113800 Pisum sativum HOM05D006272 ORTHO05D007989 7.7e-63 244.6 166 74.1
CANSAT80G1784 Cannabis sativa HOM05D006272 ORTHO05D007989 2.2e-62 243.0 169 69.8
Potri.015G072000 Populus trichocarpa HOM05D006272 ORTHO05D007989 2.9e-62 242.7 176 67.0
Thecc.03G005700 Theobroma cacao HOM05D006272 ORTHO05D007989 5.0e-62 241.9 236 55.9
Rhsim12G0162200 Rhododendron simsii HOM05D006272 ORTHO05D007989 6.5e-62 241.5 231 56.3
Actinidia19083 Actinidia chinensis HOM05D006272 ORTHO05D007989 1.1e-61 240.7 232 57.3
Ciclev10022132m.g Citrus clementina HOM05D006272 ORTHO05D007989 1.1e-61 240.7 238 58.8
MD06G1180000 Malus domestica HOM05D006272 ORTHO05D007989 1.1e-61 240.7 166 69.3
CAN.G2099.3 Capsicum annuum HOM05D006272 ORTHO05D007989 1.9e-61 240.0 167 72.5
FvH4_5g16490 Fragaria vesca HOM05D006272 ORTHO05D007989 2.5e-61 239.6 233 56.7
MD14G1185400 Malus domestica HOM05D006272 ORTHO05D007989 2.5e-61 239.6 166 69.3
Medtr3g078320 Medicago truncatula HOM05D006272 ORTHO05D007989 2.5e-61 239.6 166 72.3
VMungo1309G0353 Vigna mungo HOM05D006272 ORTHO05D007989 4.2e-61 238.8 167 70.1
Cc04_g13100 Coffea canephora HOM05D006272 ORTHO05D007989 9.4e-61 237.7 169 69.8
Lalb_Chr23g0273081 Lupinus albus HOM05D006272 ORTHO05D007989 9.4e-61 237.7 167 70.1
Nn4g22890 Nelumbo nucifera HOM05D006272 ORTHO05D007524 9.4e-61 237.7 158 70.9
PGR083G1342 Punica granatum HOM05D006272 ORTHO05D007989 1.2e-60 237.3 165 69.1
Atru.chr9.2416 Acer truncatum HOM05D006272 ORTHO05D007989 2.1e-60 236.5 212 59.9
Gohir.A03G017300 Gossypium hirsutum HOM05D006272 ORTHO05D007989 2.1e-60 236.5 229 56.8
MSTRG.4383 Avicennia marina HOM05D006272 ORTHO05D007989 2.7e-60 236.1 234 58.1
EL10Ac5g10820 Beta vulgaris HOM05D006272 ORTHO05D007989 2.7e-60 236.1 237 53.6
Prupe.5G178100 Prunus persica HOM05D006272 ORTHO05D007989 2.7e-60 236.1 235 54.5
RcHm_v2.0_Chr7g0179601 Rosa chinensis HOM05D006272 ORTHO05D007989 2.7e-60 236.1 237 54.9
vmacro16592 Vaccinium macrocarpon HOM05D006272 ORTHO05D007989 3.6e-60 235.7 231 57.6
COL.COLO4_04328 Corchorus olitorius HOM05D006272 ORTHO05D007989 4.7e-60 235.3 173 67.6
Solyc03g113990.3 Solanum lycopersicum HOM05D006272 ORTHO05D007989 4.7e-60 235.3 166 70.5
CSS0043549 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 6.1e-60 235.0 230 53.0
Gorai.003G157900 Gossypium raimondii HOM05D006272 ORTHO05D007989 8.0e-60 234.6 230 56.1
Sopen03g033040 Solanum pennellii HOM05D006272 ORTHO05D007989 1.0e-59 234.2 166 70.5
HanXRQChr16g0503601 Helianthus annuus HOM05D006272 ORTHO05D007989 1.4e-59 233.8 193 61.1
Oeu041583.1 Olea europaea HOM05D006272 ORTHO05D007989 1.4e-59 233.8 183 65.6
CSS0019620 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 1.8e-59 233.4 222 54.1
MD06G1180300 Malus domestica HOM05D006272 ORTHO05D007989 1.8e-59 233.4 174 66.1
Sc12g0005560 Simmondsia chinensis HOM05D006272 ORTHO05D007989 1.8e-59 233.4 167 67.1
Sabra15G0096800 Salix brachista HOM05D006272 ORTHO05D007989 2.3e-59 233.0 178 65.2
Eucgr.B00343 Eucalyptus grandis HOM05D006272 ORTHO05D007989 3.0e-59 232.6 162 72.8
CDE04G2481 Ceratophyllum demersum HOM05D006272 ORTHO05D006222 5.2e-59 231.9 194 63.9
Carub.0008s1010 Capsella rubella HOM05D006272 ORTHO05D007989 6.7e-59 231.5 212 57.5
PGSC0003DMG400024586 Solanum tuberosum HOM05D006272 ORTHO05D007989 8.8e-59 231.1 166 69.3
arahy.Tifrunner.gnm1.ann1.I0QXBL Arachis hypogaea HOM05D006272 ORTHO05D007989 2.0e-58 229.9 163 70.6
AUR62031036 Chenopodium quinoa HOM05D006272 ORTHO05D007989 3.3e-58 229.2 188 62.8
Lj5A121G99 Lonicera japonica HOM05D006272 ORTHO05D007989 3.3e-58 229.2 209 56.0
AL8G24090 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 4.4e-58 228.8 164 67.7
ClCG06G016760 Citrullus lanatus HOM05D006272 ORTHO05D007989 5.7e-58 228.4 222 55.0
FAN18G3972 Fragaria x ananassa HOM05D006272 ORTHO05D007989 7.5e-58 228.0 252 52.4
Sp6g11960 Schrenkiella parvula HOM05D006272 ORTHO05D007989 7.5e-58 228.0 172 65.1
Migut.D01790 Erythranthe guttata HOM05D006272 ORTHO05D007989 9.7e-58 227.6 231 55.0
Os04g0668800 Oryza sativa ssp. japonica HOM05D006272 ORTHO05D007989 9.7e-58 227.6 164 66.5
CsaV3_1G001760 Cucumis sativus L. HOM05D006272 ORTHO05D007989 1.3e-57 227.3 195 59.0
Thhalv10014644m.g Eutrema salsugineum HOM05D006272 ORTHO05D007989 1.3e-57 227.3 171 64.9
AUR62008277 Chenopodium quinoa HOM05D006272 ORTHO05D007989 6.3e-57 224.9 179 62.6
FAN04G2131 Fragaria x ananassa HOM05D006272 ORTHO05D007989 8.2e-57 224.6 203 58.6
FAN13G1305 Fragaria x ananassa HOM05D006272 ORTHO05D007989 8.2e-57 224.6 203 58.6
AT5G50100 Arabidopsis thaliana HOM05D006272 ORTHO05D007989 1.1e-56 224.2 164 65.9
BraSC37t46149Z Brassica rapa HOM05D006272 ORTHO05D007989 1.1e-56 224.2 197 59.9
Zm00001eb433220 Zea mays HOM05D006272 ORTHO05D007989 1.1e-56 224.2 150 72.0
BcaC04g20846 Brassica carinata HOM05D006272 ORTHO05D007989 1.8e-56 223.4 197 59.9
BolC9t56708H Brassica oleracea HOM05D006272 ORTHO05D007989 1.8e-56 223.4 197 59.9
Lsat_1_v5_gn_4_72700 Lactuca sativa HOM05D006272 ORTHO05D007989 3.1e-56 222.6 187 59.9
Aa31LG3G6090 Aethionema arabicum HOM05D006272 ORTHO05D007989 4.1e-56 222.2 206 57.3
Cfa019077 Carpinus fangiana HOM05D006272 ORTHO05D007989 4.1e-56 222.2 219 56.2
Nitab4.5_0006432g0010 Nicotiana tabacum HOM05D006272 ORTHO05D007989 4.1e-56 222.2 195 61.0
BcaB08g35362 Brassica carinata HOM05D006272 ORTHO05D007989 5.3e-56 221.9 188 62.8
Sed0009129 Sechium edule HOM05D006272 ORTHO05D007989 1.2e-55 220.7 157 68.8
ECA232G4277 Erigeron canadensis HOM05D006272 ORTHO05D007989 2.0e-55 219.9 210 57.6
Ah.11g046120 Amaranthus hybridus HOM05D006272 ORTHO05D007989 2.6e-55 219.5 202 55.9
MELO3C017116.2 Cucumis melo HOM05D006272 ORTHO05D007989 3.5e-55 219.2 158 67.7
SGA_v2.0_scaffold114G31850 Striga asiatica HOM05D006272 ORTHO05D007989 3.5e-55 219.2 233 55.4
ATR1149G021 Amborella trichopoda HOM05D006272 ORTHO05D007989 5.9e-55 218.4 158 67.1
THA.LOC104809256 Tarenaya hassleriana HOM05D006272 ORTHO05D007989 7.7e-55 218.0 168 63.7
C09p38510 Brassica napus HOM05D006272 ORTHO05D007989 1.0e-54 217.6 188 61.2
A10p08550 Brassica napus HOM05D006272 ORTHO05D007989 1.7e-54 216.9 188 61.2
Hund09410 Selenicereus undatus HOM05D006272 ORTHO05D007989 5.0e-54 215.3 150 70.0
HPP92_028587 Vanilla planifolia HOM05D006272 ORTHO05D007989 1.1e-53 214.2 205 55.6
arahy.Tifrunner.gnm1.ann1.LZB4LR Arachis hypogaea HOM05D006272 ORTHO05D007989 4.2e-53 212.2 151 69.5
Cpa.g.c38966 Carica papaya HOM05D006272 ORTHO05D007989 9.4e-53 211.1 124 79.0
Nitab4.5_0001422g0120 Nicotiana tabacum HOM05D006272 ORTHO05D007989 9.4e-53 211.1 142 73.2
unitig_46.g18473 Utricularia gibba HOM05D004430 ORTHO05D007989 2.7e-52 209.5 179 61.5
DCAR_021559 Daucus carota HOM05D006272 ORTHO05D007989 1.8e-51 206.8 142 67.6
Peaxi162Scf00017g02427 Petunia axillaris HOM05D006272 ORTHO05D007989 4.4e-50 202.2 224 51.3
MBI15_g12943_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 1.3e-49 200.7 165 60.0
Mapoly0071s0065 Marchantia polymorpha HOM05D006272 ORTHO05D007989 1.4e-48 197.2 154 59.7
FAN08G1485 Fragaria x ananassa HOM05D006272 ORTHO05D007989 3.1e-48 196.1 246 48.4
Pp3c1_15150 Physcomitrium patens HOM05D006272 ORTHO05D007989 2.7e-44 183.0 206 48.1
CSS0030983 Camellia sinensis var. sinensis HOM05D006272 ORTHO05D007989 1.8e-43 180.3 136 66.2
TWI15G0925 Tripterygium wilfordii HOM05D006272 ORTHO05D007989 1.5e-42 177.2 139 64.7
SMO134G0173 Selaginella moellendorffii HOM05D006272 ORTHO05D007989 1.7e-41 173.7 119 65.5
CBR_g17090 Chara braunii HOM05D006272 ORTHO05D007989 6.3e-41 171.8 128 57.8
CARHR258530 Cardamine hirsuta HOM05D006272 ORTHO05D007989 3.6e-36 156.0 208 44.7
Sed0028033 Sechium edule HOM05D006272 ORTHO05D007989 1.0e-35 154.5 156 51.9
AL8G10070 Arabidopsis lyrata HOM05D006272 ORTHO05D007989 7.0e-32 141.7 93 75.3
Cre03.g145587 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 7.0e-32 141.7 127 53.5
Hma1.2p1_1643F.1_g295250 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 1.6e-31 140.6 169 49.7
Hma1.2p1_2351F.1_g320495 Hydrangea macrophylla HOM05D006272 ORTHO05D007989 1.6e-31 140.6 169 49.7
SalBow3G0460 Salvia bowleyana HOM05D006272 ORTHO05D007989 5.0e-30 135.6 87 75.9
MCO16G260 Micromonas commoda HOM05D006272 ORTHO05D007989 1.2e-28 131.0 128 46.1
PRCOL_00006774 Prasinoderma coloniale HOM05D006272 ORTHO05D007989 3.6e-28 129.4 136 49.3
QL12p034838 Quercus lobata HOM05D006272 ORTHO05D007989 8.9e-27 124.8 83 73.5
Dinv09172 Davidia involucrata HOM05D006272 ORTHO05D007989 2.4e-24 116.7 147 44.2
MBI15_g10564_MAGBIO Magnolia biondii HOM05D006272 ORTHO05D007989 9.2e-24 114.8 80 67.5
SalBow3G4540 Salvia bowleyana HOM05D006272 ORTHO05D007989 1.9e-21 107.1 149 43.0
Gohir.A03G017120 Gossypium hirsutum HOM05D006272 ORTHO05D007989 4.3e-21 105.9 152 45.4
Cpa.g.c35589.1 Carica papaya HOM05D006272 ORTHO05D007989 7.3e-21 105.1 147 44.2
Cre02.g095077 Chlamydomonas reinhardtii HOM05D006272 ORTHO05D007989 1.6e-15 87.4 113 35.4
TPR.G22672 Trifolium pratense HOM05D006272 ORTHO05D007989 1.2e-07 61.2 39 66.7
PRCOL_00004884 Prasinoderma coloniale HOM05D006272 ORTHO05D030206 3.9e-06 56.2 130 29.2


User provided reference genes

Program Settings