Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G03066 Aquilegia oxysepala HOM05D005510 ORTHO05D006750 1.2e-250 869.4 430 100.0
Dinv14542 Davidia involucrata HOM05D005510 ORTHO05D006750 1.1e-179 633.6 389 78.9
RcHm_v2.0_Chr3g0495031 Rosa chinensis HOM05D005510 ORTHO05D006750 3.2e-176 622.1 428 72.2
Nn7g37230 Nelumbo nucifera HOM05D005510 ORTHO05D006750 2.7e-175 619.0 421 70.8
Prupe.7G023400 Prunus persica HOM05D005510 ORTHO05D006750 1.0e-174 617.1 391 76.0
MBI13_g44207_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 3.0e-174 615.5 420 71.9
Ciclev10011846m.g Citrus clementina HOM05D005510 ORTHO05D006750 5.7e-173 611.3 390 75.6
Potri.006G026100 Populus trichocarpa HOM05D005510 ORTHO05D006750 1.7e-172 609.8 424 70.0
QL07p015480 Quercus lobata HOM05D005510 ORTHO05D006750 6.3e-172 607.8 428 70.1
GSVIVG01025858001 Vitis vinifera HOM05D005510 ORTHO05D006750 6.3e-172 607.8 427 71.7
Actinidia38200 Actinidia chinensis HOM05D005510 ORTHO05D006750 1.4e-171 606.7 392 74.7
FvH4_1g29380 Fragaria vesca HOM05D005510 ORTHO05D006750 7.0e-171 604.4 390 74.4
FAN26G2114 Fragaria x ananassa HOM05D005510 ORTHO05D006750 9.1e-171 604.0 390 74.9
Medtr6g026730 Medicago truncatula HOM05D005510 ORTHO05D006750 1.6e-170 603.2 389 74.6
MD14G1100100 Malus domestica HOM05D005510 ORTHO05D006750 7.7e-170 600.9 427 71.0
PSO384G1661 Papaver somniferum HOM05D005510 ORTHO05D006750 2.2e-169 599.4 406 74.1
Rhsim13G0197800 Rhododendron simsii HOM05D005510 ORTHO05D006750 5.0e-169 598.2 430 68.8
Eucgr.A02173 Eucalyptus grandis HOM05D005510 ORTHO05D006750 6.5e-169 597.8 390 74.1
CSS0010239 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 1.5e-168 596.7 405 72.3
PSO339G1815 Papaver somniferum HOM05D005510 ORTHO05D006750 1.5e-168 596.7 429 71.1
Atru.chr8.924 Acer truncatum HOM05D005510 ORTHO05D006750 1.9e-168 596.3 390 73.8
Glyma.05G079900 Glycine max HOM05D005510 ORTHO05D006750 1.9e-168 596.3 422 69.2
Cc06_g18550 Coffea canephora HOM05D005510 ORTHO05D006750 3.2e-168 595.5 429 68.5
TAR623G1399 Trochodendron aralioides HOM05D005510 ORTHO05D006750 4.7e-167 591.7 421 70.8
Lalb_Chr02g0157631 Lupinus albus HOM05D005510 ORTHO05D006750 1.0e-166 590.5 415 70.1
Cfa019896 Carpinus fangiana HOM05D005510 ORTHO05D006750 1.4e-166 590.1 390 72.3
MELO3C019166.2 Cucumis melo HOM05D005510 ORTHO05D006750 1.4e-166 590.1 427 69.1
DCAR_020612 Daucus carota HOM05D005510 ORTHO05D006750 1.8e-166 589.7 391 72.4
Oeu008195.1 Olea europaea HOM05D005510 ORTHO05D006750 2.3e-166 589.3 388 74.2
Psat1g087480 Pisum sativum HOM05D005510 ORTHO05D006750 3.0e-166 589.0 391 72.6
Manes.10G072300 Manihot esculenta HOM05D005510 ORTHO05D006750 4.0e-166 588.6 407 70.0
CsaV3_4G029010 Cucumis sativus L. HOM05D005510 ORTHO05D006750 6.7e-166 587.8 427 68.1
Ca_04447_v3 Cicer arietinum L. HOM05D002043 ORTHO05D002207 1.2e-165 587.0 394 72.6
Cpa.g.sc33.180 Carica papaya HOM05D005510 ORTHO05D006750 2.0e-165 586.3 391 71.9
Hma1.2p1_1327F.1_g275890 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 1.7e-164 583.2 392 71.7
Phvul.004G053400 Phaseolus vulgaris HOM05D005510 ORTHO05D006750 1.7e-164 583.2 394 72.1
Duzib093G0795 Durio zibethinus HOM05D005510 ORTHO05D006750 8.3e-164 580.9 406 70.4
TWI74G1137 Tripterygium wilfordii HOM05D005510 ORTHO05D006750 1.1e-163 580.5 389 72.2
Lj5g0015267 Lotus japonicus HOM05D005510 ORTHO05D006750 1.8e-163 579.7 414 68.6
Sabra06G0019200 Salix brachista HOM05D005510 ORTHO05D006750 3.1e-163 578.9 458 64.0
Lj1C1070G2 Lonicera japonica HOM05D005510 ORTHO05D006750 5.3e-163 578.2 421 68.6
PGSC0003DMG400008133 Solanum tuberosum HOM05D005510 ORTHO05D006750 1.6e-162 576.6 400 71.0
PGR042G2248 Punica granatum HOM05D005510 ORTHO05D006750 2.0e-162 576.2 391 68.8
Gorai.002G222700 Gossypium raimondii HOM05D005510 ORTHO05D006750 3.5e-162 575.5 403 68.7
Gohir.D01G179900 Gossypium hirsutum HOM05D005510 ORTHO05D006750 7.7e-162 574.3 403 68.5
CANSAT11G0391 Cannabis sativa HOM05D005510 ORTHO05D006750 1.0e-161 573.9 389 71.7
Lsat_1_v5_gn_5_40140 Lactuca sativa HOM05D005510 ORTHO05D006750 2.2e-161 572.8 392 70.2
Gohir.A01G189700 Gossypium hirsutum HOM05D005510 ORTHO05D006750 6.5e-161 571.2 396 69.4
Sopen10g030080 Solanum pennellii HOM05D005510 ORTHO05D006750 6.5e-161 571.2 391 71.4
Hund24472 Selenicereus undatus HOM05D005510 ORTHO05D006750 2.5e-160 569.3 417 68.3
Solyc10g079440.2 Solanum lycopersicum HOM05D005510 ORTHO05D006750 7.2e-160 567.8 391 70.8
Carub.0005s2357 Capsella rubella HOM05D005510 ORTHO05D006750 2.7e-159 565.8 428 66.6
ATR1096G068 Amborella trichopoda HOM05D005510 ORTHO05D006750 3.6e-159 565.5 428 64.7
Aa31LG10G11690 Aethionema arabicum HOM05D005510 ORTHO05D006750 6.1e-159 564.7 435 65.5
COL.COLO4_37568 Corchorus olitorius HOM05D005510 ORTHO05D006750 1.0e-158 563.9 432 65.7
HanXRQChr02g0047171 Helianthus annuus HOM05D005510 ORTHO05D006750 1.0e-158 563.9 388 70.1
BolC8t50825H Brassica oleracea HOM05D005510 ORTHO05D006750 5.7e-157 558.1 398 68.8
BcaC07g40115 Brassica carinata HOM05D005510 ORTHO05D006750 7.5e-157 557.8 391 70.1
CDE08G0225 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 9.8e-157 557.4 392 69.9
arahy.Tifrunner.gnm1.ann1.RHHN50 Arachis hypogaea HOM05D005510 ORTHO05D006750 1.3e-156 557.0 453 62.3
HPP92_018208 Vanilla planifolia HOM05D005510 ORTHO05D006750 1.7e-156 556.6 392 68.1
arahy.Tifrunner.gnm1.ann1.VC24PE Arachis hypogaea HOM05D005510 ORTHO05D006750 2.2e-156 556.2 478 60.5
EL10Ac3g07380 Beta vulgaris HOM05D005510 ORTHO05D006750 1.1e-155 553.9 386 68.7
Peaxi162Scf00002g00419 Petunia axillaris HOM05D005510 ORTHO05D006750 1.4e-155 553.5 408 67.6
SalBow6G2337 Salvia bowleyana HOM05D005510 ORTHO05D006750 3.1e-155 552.4 392 67.9
AL5G38220 Arabidopsis lyrata HOM05D005510 ORTHO05D006750 4.1e-155 552.0 389 69.2
A09p49660 Brassica napus HOM05D005510 ORTHO05D006750 4.1e-155 552.0 390 70.3
BraA09t40419Z Brassica rapa HOM05D005510 ORTHO05D006750 4.1e-155 552.0 390 70.3
EL10Ac3g07382 Beta vulgaris HOM05D005510 ORTHO05D006750 5.4e-155 551.6 464 60.3
AT3G56840 Arabidopsis thaliana HOM05D005510 ORTHO05D006750 1.2e-154 550.4 390 68.7
SalBow6G2820 Salvia bowleyana HOM05D005510 ORTHO05D006750 1.2e-154 550.4 392 67.6
SGA_v2.0_scaffold69G23139 Striga asiatica HOM05D005510 ORTHO05D006750 1.2e-154 550.4 415 66.0
AUR62020963 Chenopodium quinoa HOM05D005510 ORTHO05D006750 2.0e-154 549.7 413 66.1
THA.LOC104803249 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 4.5e-154 548.5 438 62.3
Thhalv10005964m.g Eutrema salsugineum HOM05D005510 ORTHO05D006750 1.3e-153 547.0 413 66.3
Sp5g05750 Schrenkiella parvula HOM05D005510 ORTHO05D006750 1.1e-152 543.9 405 66.4
Os01g0809900 Oryza sativa ssp. japonica HOM05D005510 ORTHO05D006750 1.4e-150 537.0 392 66.1
Migut.J01685 Erythranthe guttata HOM05D005510 ORTHO05D006750 4.0e-150 535.4 416 63.9
Haze_20353 Corylus avellana HOM05D005510 ORTHO05D006750 3.7e-148 528.9 407 65.1
Sc13g0000690 Simmondsia chinensis HOM05D005510 ORTHO05D006750 6.3e-148 528.1 365 70.4
BcaC07g39994 Brassica carinata HOM05D005510 ORTHO05D006750 2.9e-145 519.2 398 65.6
Nitab4.5_0000646g0280 Nicotiana tabacum HOM05D005510 ORTHO05D006750 9.5e-144 514.2 409 64.8
VMungo0464G0325 Vigna mungo HOM05D005510 ORTHO05D006750 3.7e-140 502.3 453 57.2
arahy.Tifrunner.gnm1.ann1.T4STFC Arachis hypogaea HOM05D005510 ORTHO05D006750 1.9e-139 500.0 418 61.0
unitig_749.g14152 Utricularia gibba HOM05D005510 ORTHO05D006750 2.4e-139 499.6 392 65.1
CSS0036939 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 2.3e-134 483.0 326 71.5
ClCG04G005050 Citrullus lanatus HOM05D005510 ORTHO05D006750 4.0e-134 482.3 378 64.3
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 1.3e-132 477.2 390 62.8
CAN.G641.38 Capsicum annuum HOM05D005510 ORTHO05D006750 3.9e-129 465.7 328 68.6
AUR62018456 Chenopodium quinoa HOM05D005510 ORTHO05D006750 3.1e-126 456.1 329 65.7
Thecc.05G124100 Theobroma cacao HOM05D005510 ORTHO05D006750 6.4e-124 448.4 309 70.2
Pp3c12_4730 Physcomitrium patens HOM05D005510 ORTHO05D006750 9.2e-123 444.5 387 56.6
Sed0017548 Sechium edule HOM05D005510 ORTHO05D006750 2.1e-122 443.4 325 66.8
Hma1.2p1_1327F.1_g275900 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 1.5e-120 437.2 301 70.1
AagrBONN_evm.TU.Sc2ySwM_344.4799 Anthoceros agrestis HOM05D005510 ORTHO05D000746 6.4e-116 421.8 387 54.0
CiPaw.09G161300 Carya illinoinensis HOM05D005510 ORTHO05D006750 6.4e-116 421.8 280 71.8
Nitab4.5_0002805g0080 Nicotiana tabacum HOM05D005510 ORTHO05D006750 6.4e-116 421.8 321 67.6
MBI13_g43864_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 6.0e-114 415.2 343 62.4
C08p32070 Brassica napus HOM05D005510 ORTHO05D006750 5.1e-113 412.1 310 66.5
Mapoly0011s0121 Marchantia polymorpha HOM05D005510 ORTHO05D006750 1.9e-107 393.7 357 54.3
SMO116G0325 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 2.4e-107 393.3 411 50.1
Zm00001eb150290 Zea mays HOM05D005510 ORTHO05D006750 1.6e-106 390.6 289 65.4
A09p49680 Brassica napus HOM05D005510 ORTHO05D006750 2.3e-105 386.7 289 66.1
BraA09t40424Z Brassica rapa HOM05D005510 ORTHO05D006750 5.1e-105 385.6 287 66.6
arahy.Tifrunner.gnm1.ann1.MR8QPJ Arachis hypogaea HOM05D005510 ORTHO05D006750 1.3e-95 354.4 408 48.0
TPR.G23234 Trifolium pratense HOM05D005510 ORTHO05D006750 1.5e-88 330.9 213 72.3
Cre13.g574150 Chlamydomonas reinhardtii HOM05D005510 ORTHO05D006750 1.3e-87 327.8 435 43.9
CSS0041188 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 3.1e-86 323.2 241 66.4
CARHR166990 Cardamine hirsuta HOM05D005510 ORTHO05D006750 4.0e-86 322.8 236 67.4
THA.LOC104803303 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 6.5e-84 315.5 238 65.1
CAN.G248.49 Capsicum annuum HOM05D005510 ORTHO05D006750 1.3e-71 274.6 348 46.3
THA.LOC104803301 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 2.4e-70 270.4 187 69.5
MSTRG.19825 Avicennia marina HOM05D005510 ORTHO05D006750 1.7e-60 237.7 158 75.3
TPR.G942 Trifolium pratense HOM05D005510 ORTHO05D006750 4.4e-56 223.0 148 72.3
Zm00001eb093570 Zea mays HOM05D005510 ORTHO05D006750 9.7e-56 221.9 250 47.6
Manes.07G109500 Manihot esculenta HOM05D005510 ORTHO05D006750 2.2e-55 220.7 157 67.5
Cfa027308 Carpinus fangiana HOM05D005510 ORTHO05D006750 1.1e-54 218.4 415 37.1
Manes.05G099066 Manihot esculenta HOM05D005510 ORTHO05D006750 4.1e-54 216.5 173 63.0
SEGI_04748 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 4.2e-51 206.5 174 59.8
PGSC0003DMG400012053 Solanum tuberosum HOM05D005510 ORTHO05D006750 1.1e-46 191.8 145 65.5
AagrBONN_evm.TU.Sc2ySwM_344.567 Anthoceros agrestis HOM05D005510 ORTHO05D006750 3.0e-41 173.7 442 29.6
SMO356G0394 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 4.0e-41 173.3 417 30.9
CBR_g4412 Chara braunii HOM05D005510 ORTHO05D006750 2.6e-40 170.6 450 30.7
Pp3c25_9310 Physcomitrium patens HOM05D005510 ORTHO05D006750 4.1e-38 163.3 439 29.4
Mapoly0085s0100 Marchantia polymorpha HOM05D005510 ORTHO05D006750 5.4e-38 162.9 439 29.2
SalBow7G3561 Salvia bowleyana HOM05D005510 ORTHO05D006750 1.6e-37 161.4 120 65.8
Zm00001eb341880 Zea mays HOM05D005510 ORTHO05D006750 2.9e-28 130.6 114 55.3
CAN.G524.4 Capsicum annuum HOM05D005510 ORTHO05D006750 3.9e-28 130.2 87 70.1
SEGI_32136 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 1.8e-25 121.3 81 69.1
PRCOL_00000521 Prasinoderma coloniale HOM05D005510 ORTHO05D006750 6.8e-25 119.4 269 31.6
CAN.G636.4 Capsicum annuum HOM05D005510 ORTHO05D006750 7.5e-24 115.9 235 36.2
MD14G1091800 Malus domestica HOM05D005510 ORTHO05D006750 5.4e-22 109.8 73 68.5
AUR62018455 Chenopodium quinoa HOM05D005510 ORTHO05D006750 9.2e-22 109.0 63 82.5
MD14G1091600 Malus domestica HOM05D005510 ORTHO05D006750 2.0e-21 107.8 99 61.6
CAN.G641.39 Capsicum annuum HOM05D005510 ORTHO05D006750 2.8e-18 97.4 79 65.8
CDE09G0372 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 5.8e-16 89.7 126 43.7
CAN.G524.9 Capsicum annuum HOM05D005510 ORTHO05D020273 6.4e-15 86.3 72 59.7
MD14G1091700 Malus domestica HOM05D005510 ORTHO05D006750 8.9e-09 65.9 37 89.2
Pp3s42_220 Physcomitrium patens HOM05D003206 ORTHO05D310700 3.4e-08 63.9 429 23.8


User provided reference genes

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