Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02974 Aquilegia oxysepala HOM05D007293 ORTHO05D009143 1.0e-49 199.9 111 100.0
TAR622G0242 Trochodendron aralioides HOM05D007293 ORTHO05D009143 1.2e-18 96.7 106 60.4
MBI10_g11075_MAGBIO Magnolia biondii HOM05D007293 ORTHO05D009143 3.7e-15 85.1 65 67.7
MD13G1091900 Malus domestica HOM05D007293 ORTHO05D009143 3.4e-13 78.6 110 54.5
HanXRQChr08g0220621 Helianthus annuus HOM05D007293 ORTHO05D009143 4.5e-13 78.2 55 76.4
Lsat_1_v5_gn_4_182280 Lactuca sativa HOM05D007293 ORTHO05D009143 4.5e-13 78.2 86 57.0
Dinv33495 Davidia involucrata HOM05D007293 ORTHO05D009143 5.9e-13 77.8 112 52.7
MSTRG.24016 Avicennia marina HOM05D007293 ORTHO05D009143 7.6e-13 77.4 110 51.8
GSVIVG01032483001 Vitis vinifera HOM05D007293 ORTHO05D009143 1.3e-12 76.6 111 53.2
SalBow1G2453 Salvia bowleyana HOM05D005882 ORTHO05D009143 1.7e-12 76.3 102 52.0
CSS0045153 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 2.2e-12 75.9 110 51.8
TWI75G0451 Tripterygium wilfordii HOM05D007293 ORTHO05D009143 3.8e-12 75.1 109 49.5
FAN12G1260 Fragaria x ananassa HOM05D007293 ORTHO05D009143 2.5e-11 72.4 110 52.7
MD16G1092500 Malus domestica HOM05D007293 ORTHO05D009143 2.5e-11 72.4 110 52.7
PSO063G5020 Papaver somniferum HOM05D007293 ORTHO05D009143 2.5e-11 72.4 106 51.9
CDE06G2495 Ceratophyllum demersum HOM05D007293 ORTHO05D009143 3.2e-11 72.0 71 57.7
DCAR_011205 Daucus carota HOM05D007293 ORTHO05D009143 3.2e-11 72.0 110 49.1
Nn3g16892 Nelumbo nucifera HOM05D007293 ORTHO05D009143 3.2e-11 72.0 47 76.6
EL10Ac6g13673 Beta vulgaris HOM05D007293 ORTHO05D009143 4.2e-11 71.6 108 51.9
Migut.K01369 Erythranthe guttata HOM05D007293 ORTHO05D009143 4.2e-11 71.6 110 51.8
Lj7A591G78 Lonicera japonica HOM05D007293 ORTHO05D009143 4.2e-11 71.6 109 51.4
HPP92_019952 Vanilla planifolia HOM05D007293 ORTHO05D009143 5.5e-11 71.2 72 58.3
ECA246G2262 Erigeron canadensis HOM05D007293 ORTHO05D009143 7.2e-11 70.9 55 70.9
RcHm_v2.0_Chr4g0443851 Rosa chinensis HOM05D007293 ORTHO05D009143 7.2e-11 70.9 112 50.9
vmacro05819 Vaccinium macrocarpon HOM05D007293 ORTHO05D009143 7.2e-11 70.9 103 52.4
Prupe.1G253900 Prunus persica HOM05D007293 ORTHO05D009143 9.4e-11 70.5 111 51.4
Rhsim10G0022800 Rhododendron simsii HOM05D007293 ORTHO05D009143 9.4e-11 70.5 106 50.9
FvH4_4g34460 Fragaria vesca HOM05D007293 ORTHO05D009143 1.2e-10 70.1 110 51.8
Atru.chr11.2025 Acer truncatum HOM05D007293 ORTHO05D009143 2.1e-10 69.3 112 52.7
Actinidia06026 Actinidia chinensis HOM05D007293 ORTHO05D009143 2.1e-10 69.3 54 72.2
CDE04G1122 Ceratophyllum demersum HOM05D007293 ORTHO05D009143 2.1e-10 69.3 82 52.4
Dinv35058 Davidia involucrata HOM05D007293 ORTHO05D009143 2.1e-10 69.3 104 51.0
Migut.H00123 Erythranthe guttata HOM05D007293 ORTHO05D009143 2.1e-10 69.3 110 50.0
FAN17G1887 Fragaria x ananassa HOM05D007293 ORTHO05D009143 2.7e-10 68.9 110 50.0
FAN22G1529 Fragaria x ananassa HOM05D007293 ORTHO05D009143 2.7e-10 68.9 110 50.0
Oeu062917.1 Olea europaea HOM05D007293 ORTHO05D009143 2.7e-10 68.9 75 57.3
CSS0049977 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 4.6e-10 68.2 69 56.5
Zm00001eb153880 Zea mays HOM05D007293 ORTHO05D009143 4.6e-10 68.2 60 66.7
PSO339G0117 Papaver somniferum HOM05D007293 ORTHO05D009143 6.1e-10 67.8 73 58.9
CSS0001505 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 7.9e-10 67.4 77 58.4
Os01g0738000 Oryza sativa ssp. japonica HOM05D007293 ORTHO05D009143 7.9e-10 67.4 86 52.3
RcHm_v2.0_Chr4g0443841 Rosa chinensis HOM05D007293 ORTHO05D009143 7.9e-10 67.4 111 50.5
CSS0015603 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 1.0e-09 67.0 108 50.9
CSS0016211 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 1.4e-09 66.6 80 50.0
CANSAT01G1482 Cannabis sativa HOM05D007293 ORTHO05D009143 2.3e-09 65.9 110 47.3
ClCG08G018060 Citrullus lanatus HOM05D007293 ORTHO05D009143 2.3e-09 65.9 110 49.1
PSO832G1108 Papaver somniferum HOM05D007293 ORTHO05D009143 3.0e-09 65.5 106 50.9
CSS0040497 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 3.9e-09 65.1 110 46.4
BcaC08g45820 Brassica carinata HOM05D007293 ORTHO05D009143 5.1e-09 64.7 109 48.6
Hund05995 Selenicereus undatus HOM05D007293 ORTHO05D009143 5.1e-09 64.7 107 45.8
AUR62014041 Chenopodium quinoa HOM05D007293 ORTHO05D009143 6.7e-09 64.3 99 50.5
Manes.13G030700 Manihot esculenta HOM05D007293 ORTHO05D009143 1.9e-08 62.8 112 45.5
Prupe.5G015600 Prunus persica HOM05D007293 ORTHO05D009143 1.9e-08 62.8 108 48.1
THA.LOC104808972 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 1.9e-08 62.8 111 47.7
Thecc.02G249100 Theobroma cacao HOM05D007293 ORTHO05D009143 1.9e-08 62.8 109 47.7
BcaC03g15179 Brassica carinata HOM05D007293 ORTHO05D009143 2.5e-08 62.4 83 51.8
ATR0730G001 Amborella trichopoda HOM05D007293 ORTHO05D009143 3.3e-08 62.0 106 45.3
QL03p061237 Quercus lobata HOM05D007293 ORTHO05D009143 3.3e-08 62.0 108 50.0
PGR119G0124 Punica granatum HOM05D007293 ORTHO05D009143 4.3e-08 61.6 111 47.7
BolC2t08814H Brassica oleracea HOM05D007293 ORTHO05D009143 5.7e-08 61.2 82 52.4
BcaB05g24561 Brassica carinata HOM05D007293 ORTHO05D009143 7.4e-08 60.8 110 48.2
AUR62005378 Chenopodium quinoa HOM05D007293 ORTHO05D009143 9.7e-08 60.5 99 48.5
Ciclev10033010m.g Citrus clementina HOM05D007293 ORTHO05D009143 9.7e-08 60.5 112 46.4
CiPaw.05G150900 Carya illinoinensis HOM05D007293 ORTHO05D009143 1.7e-07 59.7 110 44.5
BcaB03g15542 Brassica carinata HOM05D007293 ORTHO05D009143 2.2e-07 59.3 110 47.3
C02p27590 Brassica napus HOM05D007293 ORTHO05D009143 2.2e-07 59.3 82 51.2
THA.LOC104822141 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 2.2e-07 59.3 111 46.8
A02p16490 Brassica napus HOM05D007293 ORTHO05D009143 2.8e-07 58.9 82 51.2
BraA02t06707Z Brassica rapa HOM05D007293 ORTHO05D009143 2.8e-07 58.9 82 51.2
BolC6t38732H Brassica oleracea HOM05D007293 ORTHO05D009143 3.7e-07 58.5 102 48.0
Cfa009144 Carpinus fangiana HOM05D007293 ORTHO05D009143 3.7e-07 58.5 93 50.5
Sp5g25470 Schrenkiella parvula HOM05D007293 ORTHO05D009143 3.7e-07 58.5 111 48.6
Cc07_g02290 Coffea canephora HOM05D007293 ORTHO05D009143 6.3e-07 57.8 102 49.0
Gohir.A03G139900 Gossypium hirsutum HOM05D007293 ORTHO05D009143 6.3e-07 57.8 110 49.1
Duzib268G1575 Durio zibethinus HOM05D007293 ORTHO05D009143 8.2e-07 57.4 109 45.9
Thhalv10019350m.g Eutrema salsugineum HOM05D007293 ORTHO05D009143 8.2e-07 57.4 113 46.9
Gohir.D02G162700 Gossypium hirsutum HOM05D007293 ORTHO05D009143 1.1e-06 57.0 110 48.2
AT1G70350 Arabidopsis thaliana HOM05D007293 ORTHO05D009143 1.4e-06 56.6 111 45.0
C06p36130 Brassica napus HOM05D007293 ORTHO05D009143 1.4e-06 56.6 102 47.1
Carub.0002s1704 Capsella rubella HOM05D007293 ORTHO05D009143 1.4e-06 56.6 113 46.9
Glyma.08G037500 Glycine max HOM05D007491 ORTHO05D009489 1.4e-06 56.6 92 41.3
Gorai.005G182700 Gossypium raimondii HOM05D007293 ORTHO05D009143 1.4e-06 56.6 110 48.2
AL2G29660 Arabidopsis lyrata HOM05D007293 ORTHO05D009143 1.8e-06 56.2 113 46.0
BcaB07g33183 Brassica carinata HOM05D027076 ORTHO05D027107 1.8e-06 56.2 74 51.4
Eucgr.H02610 Eucalyptus grandis HOM05D007293 ORTHO05D009143 1.8e-06 56.2 114 41.2
Phvul.002G071600 Phaseolus vulgaris HOM05D007293 ORTHO05D009143 1.8e-06 56.2 59 66.1
Sc04g0009130 Simmondsia chinensis HOM05D007293 ORTHO05D009143 1.8e-06 56.2 97 44.3
TPR.G13591 Trifolium pratense HOM05D007293 ORTHO05D009143 1.8e-06 56.2 100 47.0
A07p31100 Brassica napus HOM05D007293 ORTHO05D009143 4.1e-06 55.1 106 48.1
BraA07t30744Z Brassica rapa HOM05D007293 ORTHO05D009143 4.1e-06 55.1 106 48.1


User provided reference genes

Program Settings