Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02966 Aquilegia oxysepala HOM05D006935 ORTHO05D008944 2.7e-166 588.6 296 100.0
Cc04_g13740 Coffea canephora HOM05D006935 ORTHO05D008944 1.2e-116 423.7 310 71.0
CiPaw.11G027700 Carya illinoinensis HOM05D006935 ORTHO05D008944 1.5e-116 423.3 291 75.9
Nn4g22789 Nelumbo nucifera HOM05D006935 ORTHO05D008944 5.8e-116 421.4 289 75.1
Actinidia19311 Actinidia chinensis HOM05D006935 ORTHO05D008944 5.4e-114 414.8 286 74.5
QL10p011920 Quercus lobata HOM05D006935 ORTHO05D008944 5.4e-114 414.8 290 72.8
GSVIVG01007766001 Vitis vinifera HOM05D006935 ORTHO05D008944 5.4e-114 414.8 284 75.7
vmacro19376 Vaccinium macrocarpon HOM05D006935 ORTHO05D008944 7.0e-114 414.5 284 73.2
CSS0041391 Camellia sinensis var. sinensis HOM05D006935 ORTHO05D008944 6.0e-113 411.4 285 74.4
Cpa.g.sc124.48 Carica papaya HOM05D006935 ORTHO05D008944 7.8e-113 411.0 280 73.9
Haze_07457 Corylus avellana HOM05D006935 ORTHO05D008944 7.8e-113 411.0 296 72.3
Thecc.03G010500 Theobroma cacao HOM05D006935 ORTHO05D008944 1.0e-112 410.6 297 71.0
Rhsim08G0171100 Rhododendron simsii HOM05D006935 ORTHO05D008944 1.3e-112 410.2 280 74.3
Manes.06G104000 Manihot esculenta HOM05D006935 ORTHO05D008944 1.7e-112 409.8 301 70.1
SGA_v2.0_scaffold90G27953 Striga asiatica HOM05D006935 ORTHO05D008944 3.0e-112 409.1 295 69.8
FvH4_5g05200 Fragaria vesca HOM05D006935 ORTHO05D008944 8.6e-112 407.5 283 72.8
Sopen03g033350 Solanum pennellii HOM05D006935 ORTHO05D008944 1.5e-111 406.8 287 71.1
TWI81G0925 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 3.3e-111 405.6 293 68.9
TWI81G0947 Tripterygium wilfordii HOM05D006935 ORTHO05D008944 3.3e-111 405.6 293 68.9
PGSC0003DMG400024494 Solanum tuberosum HOM05D006935 ORTHO05D008944 4.3e-111 405.2 288 72.6
HanXRQChr16g0517271 Helianthus annuus HOM05D006935 ORTHO05D008944 5.6e-111 404.8 301 70.1
PGR083G2867 Punica granatum HOM05D006935 ORTHO05D008944 9.5e-111 404.1 286 73.4
ECA236G1157 Erigeron canadensis HOM05D006935 ORTHO05D008944 2.1e-110 402.9 298 70.1
Eucgr.B00368 Eucalyptus grandis HOM05D006935 ORTHO05D008944 2.1e-110 402.9 269 76.6
Solyc03g114250.4 Solanum lycopersicum HOM05D006935 ORTHO05D008944 2.1e-110 402.9 285 71.2
MSTRG.11442 Avicennia marina HOM05D006935 ORTHO05D008944 3.6e-110 402.1 299 69.6
CANSAT80G0279 Cannabis sativa HOM05D006935 ORTHO05D008944 3.6e-110 402.1 245 80.0
Lsat_1_v5_gn_5_17180 Lactuca sativa HOM05D006935 ORTHO05D008944 3.6e-110 402.1 312 67.0
CsaV3_1G008420 Cucumis sativus L. HOM05D006935 ORTHO05D008944 4.7e-110 401.7 272 75.0
Sabra15G0098700 Salix brachista HOM05D006935 ORTHO05D008944 4.7e-110 401.7 298 70.1
Gorai.007G001900 Gossypium raimondii HOM05D006935 ORTHO05D008944 6.2e-110 401.4 291 72.2
Gohir.D11G001000 Gossypium hirsutum HOM05D006935 ORTHO05D008944 8.1e-110 401.0 296 71.3
PSO302G0172 Papaver somniferum HOM05D006935 ORTHO05D008944 8.1e-110 401.0 298 70.1
SalBow5G1860 Salvia bowleyana HOM05D006935 ORTHO05D008944 1.1e-109 400.6 298 69.8
Migut.I00022 Erythranthe guttata HOM05D006935 ORTHO05D008944 1.4e-109 400.2 278 70.9
TAR622G0425 Trochodendron aralioides HOM05D006935 ORTHO05D008944 1.8e-109 399.8 230 84.3
Gohir.A11G001400 Gossypium hirsutum HOM05D006935 ORTHO05D008944 2.3e-109 399.4 296 71.3
Potri.015G074700 Populus trichocarpa HOM05D006935 ORTHO05D008944 8.9e-109 397.5 266 75.2
Atru.chr9.2451 Acer truncatum HOM05D006935 ORTHO05D008944 1.2e-108 397.1 296 70.6
Cfa019105 Carpinus fangiana HOM05D006935 ORTHO05D004872 1.2e-108 397.1 283 73.9
Ciclev10021410m.g Citrus clementina HOM05D006935 ORTHO05D008944 1.2e-108 397.1 293 68.9
RcHm_v2.0_Chr7g0193711 Rosa chinensis HOM05D006935 ORTHO05D008944 1.2e-108 397.1 287 70.4
COL.COLO4_04599 Corchorus olitorius HOM05D006935 ORTHO05D008944 1.5e-108 396.7 293 69.6
Duzib068G1137 Durio zibethinus HOM05D006935 ORTHO05D008944 1.5e-108 396.7 290 71.4
Lalb_Chr07g0182691 Lupinus albus HOM05D006935 ORTHO05D008944 2.0e-108 396.4 268 73.5
AL8G39840 Arabidopsis lyrata HOM05D006935 ORTHO05D008944 9.8e-108 394.0 292 69.9
MD14G1182500 Malus domestica HOM05D006935 ORTHO05D008944 1.3e-107 393.7 271 72.7
Nitab4.5_0005862g0020 Nicotiana tabacum HOM05D006935 ORTHO05D008944 2.9e-107 392.5 333 62.2
Thhalv10004703m.g Eutrema salsugineum HOM05D006935 ORTHO05D008944 3.7e-107 392.1 264 74.2
Glyma.05G036900 Glycine max HOM05D006935 ORTHO05D008944 6.4e-107 391.3 285 71.2
Sp2g25990 Schrenkiella parvula HOM05D006935 ORTHO05D008944 8.3e-107 391.0 290 68.6
AT5G62840 Arabidopsis thaliana HOM05D006935 ORTHO05D008944 1.1e-106 390.6 288 70.5
THA.LOC104798977 Tarenaya hassleriana HOM05D006935 ORTHO05D008944 1.4e-106 390.2 239 77.8
FAN04G2667 Fragaria x ananassa HOM05D006935 ORTHO05D008944 2.4e-106 389.4 276 72.1
Aa31LG11G860 Aethionema arabicum HOM05D006935 ORTHO05D008944 3.2e-106 389.0 286 69.2
Sc12g0005390 Simmondsia chinensis HOM05D006935 ORTHO05D008944 3.2e-106 389.0 263 74.1
BcaB02g09696 Brassica carinata HOM05D006935 ORTHO05D008944 5.4e-106 388.3 242 77.7
TPR.G37522 Trifolium pratense HOM05D006935 ORTHO05D008944 5.4e-106 388.3 290 68.6
CARHR276620 Cardamine hirsuta HOM05D006935 ORTHO05D008944 7.1e-106 387.9 292 69.2
MELO3C002259.2 Cucumis melo HOM05D006935 ORTHO05D008944 7.1e-106 387.9 260 76.2
FAN18G4193 Fragaria x ananassa HOM05D006935 ORTHO05D004872 7.1e-106 387.9 269 73.6
VMungo1215G2532 Vigna mungo HOM05D006935 ORTHO05D008944 7.1e-106 387.9 241 79.3
Carub.0008s2355 Capsella rubella HOM05D006935 ORTHO05D008944 9.2e-106 387.5 290 67.9
ClCG01G013080 Citrullus lanatus HOM05D006935 ORTHO05D008944 1.2e-105 387.1 260 76.2
MBI16_g05651_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 1.2e-105 387.1 230 82.6
BcaC01g02525 Brassica carinata HOM05D006935 ORTHO05D008944 1.6e-105 386.7 290 68.6
C03p63900 Brassica napus HOM05D006935 ORTHO05D008944 1.6e-105 386.7 290 68.6
BolC3t18645H Brassica oleracea HOM05D006935 ORTHO05D008944 1.6e-105 386.7 290 68.6
Ah.02g110460 Amaranthus hybridus HOM05D006935 ORTHO05D008944 2.1e-105 386.3 297 65.0
A06p29590 Brassica napus HOM05D006935 ORTHO05D008944 2.1e-105 386.3 242 76.4
BraA06t25905Z Brassica rapa HOM05D006935 ORTHO05D008944 3.5e-105 385.6 289 67.8
MBI16_g32800_MAGBIO Magnolia biondii HOM05D006935 ORTHO05D008944 4.6e-105 385.2 298 69.8
Phvul.003G199600 Phaseolus vulgaris HOM05D006935 ORTHO05D008944 7.8e-105 384.4 284 69.4
Lj4g0026943 Lotus japonicus HOM05D006935 ORTHO05D008944 1.3e-104 383.6 293 65.9
Medtr4g106970 Medicago truncatula HOM05D006935 ORTHO05D008944 1.3e-104 383.6 290 66.6
Nitab4.5_0000852g0050 Nicotiana tabacum HOM05D006935 ORTHO05D008944 1.7e-104 383.3 290 67.9
unitig_749.g13472 Utricularia gibba HOM05D006935 ORTHO05D008944 3.0e-104 382.5 275 69.1
Dinv09149 Davidia involucrata HOM05D006935 ORTHO05D008944 3.9e-104 382.1 259 77.2
AUR62008221 Chenopodium quinoa HOM05D006935 ORTHO05D008944 1.1e-103 380.6 239 78.2
EL10Ac5g10748 Beta vulgaris HOM05D006935 ORTHO05D008944 1.6e-102 376.7 228 79.4
Hund09430 Selenicereus undatus HOM05D006935 ORTHO05D004872 8.1e-102 374.4 276 69.2
Os01g0660900 Oryza sativa ssp. japonica HOM05D006935 ORTHO05D008944 2.3e-101 372.9 238 76.1
Zm00001eb359580 Zea mays HOM05D006935 ORTHO05D008944 1.5e-100 370.2 236 76.7
CDE04G2457 Ceratophyllum demersum HOM05D005049 ORTHO05D004872 9.9e-100 367.5 284 66.9
Oeu016368.1 Olea europaea HOM05D006935 ORTHO05D008944 3.5e-97 359.0 289 66.8
SEGI_12501 Sequoiadendron giganteum HOM05D006935 ORTHO05D008944 1.3e-96 357.1 238 71.4
HPP92_024712 Vanilla planifolia HOM05D006935 ORTHO05D008944 1.3e-96 357.1 232 75.4
AUR62030975 Chenopodium quinoa HOM05D006935 ORTHO05D008944 1.9e-95 353.2 232 74.6
CAN.G781.17 Capsicum annuum HOM05D006935 ORTHO05D008944 3.3e-95 352.4 257 71.2
Peaxi162Scf00017g02821 Petunia axillaris HOM05D006935 ORTHO05D008944 5.6e-95 351.7 252 72.6
Pp3c16_7000 Physcomitrium patens HOM05D006935 ORTHO05D008944 3.1e-93 345.9 253 67.6
Ca_21910_v3 Cicer arietinum L. HOM05D006935 ORTHO05D008944 5.1e-88 328.6 229 72.1
Mapoly0091s0071 Marchantia polymorpha HOM05D006935 ORTHO05D008944 1.5e-87 327.0 263 61.6
Psat4g057680 Pisum sativum HOM05D006935 ORTHO05D008944 9.6e-87 324.3 249 67.9
ATR0730G238 Amborella trichopoda HOM05D006935 ORTHO05D008944 3.9e-80 302.4 306 54.6
Peaxi162Scf00017g02830 Petunia axillaris HOM05D006935 ORTHO05D008944 4.8e-78 295.4 209 71.8
FAN08G3443 Fragaria x ananassa HOM05D006935 ORTHO05D004872 6.2e-78 295.0 223 70.0
AagrBONN_evm.TU.Sc2ySwM_117.38 Anthoceros agrestis HOM05D006935 ORTHO05D008944 9.0e-77 291.2 193 73.6
SMO141G0200 Selaginella moellendorffii HOM05D006935 ORTHO05D008944 5.5e-74 282.0 182 74.2
EL10Ac5g10761 Beta vulgaris HOM05D006935 ORTHO05D008944 1.9e-71 273.5 219 65.3
Hma1.2p1_0176F.1_g077560 Hydrangea macrophylla HOM05D006935 ORTHO05D008944 4.1e-61 239.2 179 72.1
Prupe.5G175000 Prunus persica HOM05D006935 ORTHO05D008944 3.8e-59 232.6 204 60.8
Cre06.g272300 Chlamydomonas reinhardtii HOM05D006935 ORTHO05D008944 4.2e-58 229.2 243 51.4
Sed0005822 Sechium edule HOM05D006935 ORTHO05D008944 3.9e-56 222.6 180 66.7
arahy.Tifrunner.gnm1.ann1.0F4FSZ Arachis hypogaea HOM05D006935 ORTHO05D008944 3.9e-48 196.1 113 78.8
arahy.Tifrunner.gnm1.ann1.209TGD Arachis hypogaea HOM05D006935 ORTHO05D008944 6.7e-48 195.3 115 76.5
Actinidia20183 Actinidia chinensis HOM05D006935 ORTHO05D008944 4.1e-45 186.0 134 72.4
Lj5C123T7 Lonicera japonica HOM05D006935 ORTHO05D008944 3.0e-40 169.9 120 71.7
Psat4g057640 Pisum sativum HOM05D006935 ORTHO05D008944 1.8e-37 160.6 218 42.7
Lj5C123T8 Lonicera japonica HOM05D006935 ORTHO05D008944 4.1e-29 132.9 77 79.2
MD06G1175700 Malus domestica HOM05D006935 ORTHO05D008944 2.9e-27 126.7 221 37.1
PRCOL_00001554 Prasinoderma coloniale HOM05D006935 ORTHO05D008944 3.6e-25 119.8 221 38.0
MCO16G270 Micromonas commoda HOM05D006935 ORTHO05D008944 1.9e-18 97.4 209 35.4
Actinidia01759 Actinidia chinensis HOM05D006935 ORTHO05D008944 2.5e-18 97.1 63 81.0
Hund09427 Selenicereus undatus HOM05D006935 ORTHO05D008944 3.3e-10 70.1 45 75.6
Cre13.g564000 Chlamydomonas reinhardtii HOM05D006820 ORTHO05D008526 9.8e-07 58.5 208 31.2
Nn4g24775 Nelumbo nucifera HOM05D006935 ORTHO05D008944 6.4e-06 55.8 33 66.7


User provided reference genes

Program Settings