Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02955 Aquilegia oxysepala HOM05D003929 ORTHO05D004499 1.1e-279 966.1 516 100.0
TAR622G0564 Trochodendron aralioides HOM05D003929 ORTHO05D004499 9.6e-151 537.7 547 59.0
TAR374G1605 Trochodendron aralioides HOM05D003929 ORTHO05D004499 1.1e-146 524.2 563 57.9
PSO063G6021 Papaver somniferum HOM05D003929 ORTHO05D004499 1.9e-146 523.5 565 58.8
Dinv20657 Davidia involucrata HOM05D003929 ORTHO05D004499 2.7e-137 493.0 537 57.2
CiPaw.11G026500 Carya illinoinensis HOM05D003929 ORTHO05D004499 9.7e-135 484.6 534 57.3
GSVIVG01007750001 Vitis vinifera HOM05D003929 ORTHO05D004499 9.7e-135 484.6 528 58.5
Dinv02898 Davidia involucrata HOM05D003929 ORTHO05D004499 1.0e-131 474.6 531 56.5
Prupe.5G174100 Prunus persica HOM05D003929 ORTHO05D004499 2.2e-131 473.4 524 56.7
RcHm_v2.0_Chr7g0193581 Rosa chinensis HOM05D003929 ORTHO05D004499 2.9e-131 473.0 527 57.3
QL10p011722 Quercus lobata HOM05D003929 ORTHO05D004499 8.5e-131 471.5 509 58.2
TWI14G0242 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 1.9e-130 470.3 525 56.0
PSO832G4520 Papaver somniferum HOM05D003929 ORTHO05D004499 7.2e-130 468.4 564 55.1
Duzib068G1333 Durio zibethinus HOM05D003929 ORTHO05D004499 1.1e-127 461.1 534 56.6
FAN13G1321 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.5e-127 460.7 526 56.5
Gorai.008G295200 Gossypium raimondii HOM05D003929 ORTHO05D004499 7.4e-127 458.4 526 56.5
FvH4_5g05290 Fragaria vesca HOM05D003929 ORTHO05D004499 9.7e-127 458.0 529 56.3
Atru.chr9.2475 Acer truncatum HOM05D003929 ORTHO05D004499 1.3e-126 457.6 528 55.7
Gohir.A12G274000 Gossypium hirsutum HOM05D003929 ORTHO05D004499 1.3e-126 457.6 526 57.0
Cpa.g.sc770.1 Carica papaya HOM05D003929 ORTHO05D004499 1.7e-126 457.2 530 54.7
FAN04G3176 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.7e-126 457.2 528 55.9
FAN18G3294 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.1e-125 454.5 529 55.6
Gohir.D12G274700 Gossypium hirsutum HOM05D003929 ORTHO05D004499 1.4e-125 454.1 535 56.1
Hma1.2p1_0176F.1_g077430 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 1.4e-125 454.1 495 57.2
FAN18G3765 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.8e-125 453.8 529 56.1
Nn1g01975 Nelumbo nucifera HOM05D003929 ORTHO05D004499 3.1e-125 453.0 567 51.7
Nitab4.5_0001017g0080 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.2e-124 451.1 486 57.0
Oeu016382.1 Olea europaea HOM05D003929 ORTHO05D004499 2.0e-124 450.3 529 55.0
Solyc06g071470.4 Solanum lycopersicum HOM05D003929 ORTHO05D004499 5.9e-124 448.7 528 55.1
SalBow5G2324 Salvia bowleyana HOM05D003929 ORTHO05D004499 1.0e-123 448.0 510 56.1
Cfa019114 Carpinus fangiana HOM05D003929 ORTHO05D004499 2.2e-123 446.8 560 53.0
Rhsim08G0171800 Rhododendron simsii HOM05D003929 ORTHO05D004499 1.1e-122 444.5 493 56.6
TWI39G0937 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 1.9e-122 443.7 523 54.3
CSS0017959 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 3.2e-122 443.0 481 58.0
PGSC0003DMG400027090 Solanum tuberosum HOM05D003929 ORTHO05D004499 3.2e-122 443.0 511 55.2
Potri.012G080800 Populus trichocarpa HOM05D003929 ORTHO05D004499 4.2e-122 442.6 527 53.1
Potri.015G076100 Populus trichocarpa HOM05D003929 ORTHO05D004499 4.2e-122 442.6 507 55.0
Duzib205G0135 Durio zibethinus HOM05D003929 ORTHO05D004499 1.6e-121 440.7 536 53.9
Sopen06g027750 Solanum pennellii HOM05D003929 ORTHO05D004499 1.0e-120 438.0 532 54.3
Eucgr.B00317 Eucalyptus grandis HOM05D003929 ORTHO05D004499 3.9e-120 436.0 520 53.8
PGR083G1389 Punica granatum HOM05D003929 ORTHO05D004499 3.9e-120 436.0 510 54.7
CAN.G628.79 Capsicum annuum HOM05D003929 ORTHO05D004499 6.7e-120 435.3 511 56.0
TWI31G0970 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 3.3e-119 433.0 523 53.7
Thecc.03G012300 Theobroma cacao HOM05D003929 ORTHO05D004499 1.7e-118 430.6 532 53.9
DCAR_026132 Daucus carota HOM05D003929 ORTHO05D004499 6.3e-118 428.7 526 53.8
ECA232G3264 Erigeron canadensis HOM05D003929 ORTHO05D004499 8.2e-118 428.3 534 53.0
CAN.G781.12 Capsicum annuum HOM05D003929 ORTHO05D004499 3.1e-117 426.4 505 54.3
CiPaw.12G026400 Carya illinoinensis HOM05D003929 ORTHO05D004499 1.2e-116 424.5 521 53.9
MD14G1180600 Malus domestica HOM05D003929 ORTHO05D004499 2.6e-116 423.3 493 55.4
Glyma.06G182600 Glycine max HOM05D003929 ORTHO05D004499 1.1e-114 417.9 489 51.7
Manes.14G066000 Manihot esculenta HOM05D003929 ORTHO05D004499 1.9e-114 417.2 540 52.0
Lalb_Chr13g0297821 Lupinus albus HOM05D003929 ORTHO05D004499 7.2e-114 415.2 514 50.0
TPR.G37553 Trifolium pratense HOM05D003929 ORTHO05D004499 2.1e-113 413.7 508 51.8
MSTRG.11449 Avicennia marina HOM05D003929 ORTHO05D004499 4.7e-113 412.5 520 51.9
HanXRQChr16g0504021 Helianthus annuus HOM05D003929 ORTHO05D004499 4.7e-113 412.5 489 53.8
Peaxi162Scf00017g02914 Petunia axillaris HOM05D003929 ORTHO05D004499 6.1e-113 412.1 501 53.3
Cc04_g14000 Coffea canephora HOM05D003929 ORTHO05D004499 1.8e-112 410.6 543 51.2
CANSAT80G0843 Cannabis sativa HOM05D003929 ORTHO05D004499 1.3e-110 404.4 533 49.3
Manes.06G104600 Manihot esculenta HOM05D003929 ORTHO05D004499 1.7e-110 404.1 506 52.8
Phvul.003G200200 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 2.2e-110 403.7 509 51.3
FAN08G2589 Fragaria x ananassa HOM05D003929 ORTHO05D004499 3.7e-110 402.9 531 51.8
Lj5C124G9 Lonicera japonica HOM05D003929 ORTHO05D004499 1.1e-109 401.4 537 52.0
Nitab4.5_0009783g0030 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.1e-109 401.4 472 52.3
MD06G1174100 Malus domestica HOM05D003929 ORTHO05D004499 1.4e-109 401.0 496 54.2
Phvul.009G178800 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 1.4e-109 401.0 522 48.3
Haze_07467 Corylus avellana HOM05D003929 ORTHO05D004499 7.0e-109 398.7 610 47.4
Medtr4g106880 Medicago truncatula HOM05D003929 ORTHO05D004499 7.0e-109 398.7 507 52.7
Migut.I00015 Erythranthe guttata HOM05D003929 ORTHO05D004499 2.0e-108 397.1 519 50.5
Lj4g0023186 Lotus japonicus HOM05D003929 ORTHO05D004499 2.6e-108 396.7 511 51.5
VMungo1309G0717 Vigna mungo HOM05D003929 ORTHO05D004499 5.5e-106 389.0 498 48.2
vmacro19383 Vaccinium macrocarpon HOM05D003929 ORTHO05D004499 2.1e-105 387.1 507 49.1
Ca_21916_v3 Cicer arietinum L. HOM05D003929 ORTHO05D004499 1.0e-104 384.8 505 50.9
Hund09434 Selenicereus undatus HOM05D003929 ORTHO05D004499 1.8e-104 384.0 540 48.9
EL10Ac5g10751 Beta vulgaris HOM05D003929 ORTHO05D004499 3.0e-104 383.3 541 49.5
Lsat_1_v5_gn_4_75281 Lactuca sativa HOM05D003929 ORTHO05D004499 6.7e-104 382.1 493 53.5
VMungo1215G1851 Vigna mungo HOM05D003929 ORTHO05D004499 6.7e-104 382.1 518 50.4
arahy.Tifrunner.gnm1.ann1.S02CG0 Arachis hypogaea HOM05D003929 ORTHO05D004499 9.7e-103 378.3 528 45.8
ClCG06G017000 Citrullus lanatus HOM05D003929 ORTHO05D004499 9.7e-103 378.3 524 49.4
Aa31LG11G880 Aethionema arabicum HOM05D003929 ORTHO05D004499 1.3e-102 377.9 527 45.5
MBI10_g41915_MAGBIO Magnolia biondii HOM05D003929 ORTHO05D004499 2.8e-102 376.7 544 50.2
Sed0022246 Sechium edule HOM05D003929 ORTHO05D004499 4.8e-102 375.9 529 48.0
arahy.Tifrunner.gnm1.ann1.R24CC5 Arachis hypogaea HOM05D003929 ORTHO05D004499 6.3e-102 375.6 534 46.8
Lj1g0005514 Lotus japonicus HOM05D003929 ORTHO05D004499 6.3e-102 375.6 505 49.5
Glyma.17G089700 Glycine max HOM05D003929 ORTHO05D004499 2.4e-101 373.6 508 49.2
BcaB02g09694 Brassica carinata HOM05D003929 ORTHO05D004499 5.3e-101 372.5 492 48.6
Lalb_Chr11g0071231 Lupinus albus HOM05D003929 ORTHO05D004499 5.3e-101 372.5 483 48.9
Carub.0008s2353 Capsella rubella HOM05D003929 ORTHO05D004499 1.6e-100 370.9 540 45.4
THA.LOC104818232 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 1.0e-99 368.2 522 48.7
Glyma.05G037400 Glycine max HOM05D003929 ORTHO05D004499 1.7e-99 367.5 520 46.2
BraA06t25903Z Brassica rapa HOM05D003929 ORTHO05D004499 3.8e-99 366.3 506 47.0
THA.LOC104821459 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 8.5e-99 365.2 519 48.7
BcaC01g02523 Brassica carinata HOM05D003929 ORTHO05D004499 1.1e-98 364.8 533 45.6
C03p63930 Brassica napus HOM05D003929 ORTHO05D004499 1.1e-98 364.8 529 45.9
Sp2g25960 Schrenkiella parvula HOM05D003929 ORTHO05D004499 1.1e-98 364.8 534 45.1
CARHR276590 Cardamine hirsuta HOM05D003929 ORTHO05D004499 1.5e-98 364.4 505 46.5
CsaV3_1G001520 Cucumis sativus L. HOM05D003929 ORTHO05D004499 1.5e-98 364.4 528 48.5
AL8G39770 Arabidopsis lyrata HOM05D003929 ORTHO05D004499 1.9e-98 364.0 532 45.1
BolC3t18647H Brassica oleracea HOM05D003929 ORTHO05D004499 1.9e-98 364.0 535 45.4
Nitab4.5_0007719g0020 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.9e-98 364.0 511 47.9
AT5G62810 Arabidopsis thaliana HOM05D003929 ORTHO05D004499 3.2e-98 363.2 530 44.7
Thhalv10004017m.g Eutrema salsugineum HOM05D003929 ORTHO05D004499 9.4e-98 361.7 528 44.5
MELO3C026291.2 Cucumis melo HOM05D003929 ORTHO05D004499 2.1e-97 360.5 493 49.9
A06p29570 Brassica napus HOM05D003929 ORTHO05D004499 8.0e-97 358.6 506 46.2
BolC9t53798H Brassica oleracea HOM05D003929 ORTHO05D004499 2.0e-95 354.0 527 44.6
Solyc03g114330.3 Solanum lycopersicum HOM05D003929 ORTHO05D004499 2.0e-95 354.0 483 50.5
BcaC04g23392 Brassica carinata HOM05D003929 ORTHO05D004499 3.4e-95 353.2 527 44.6
C09p08860 Brassica napus HOM05D003929 ORTHO05D004499 3.4e-95 353.2 527 44.6
Peaxi162Scf00689g00222 Petunia axillaris HOM05D003929 ORTHO05D004499 4.4e-95 352.8 525 45.9
A09p07860 Brassica napus HOM05D003929 ORTHO05D004499 5.7e-95 352.4 489 46.6
BraA09t36437Z Brassica rapa HOM05D003929 ORTHO05D004499 7.5e-95 352.1 489 46.4
CDE11G0983 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 1.4e-93 347.8 529 45.0
CDE05G2632 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 1.8e-93 347.4 529 47.3
Actinidia19318 Actinidia chinensis HOM05D003929 ORTHO05D004499 2.7e-92 343.6 383 56.1
SalBow5G2758 Salvia bowleyana HOM05D003929 ORTHO05D004499 3.5e-92 343.2 506 46.0
SGA_v2.0_scaffold90G27941 Striga asiatica HOM05D003929 ORTHO05D004499 4.5e-92 342.8 539 46.4
AUR62030967 Chenopodium quinoa HOM05D003929 ORTHO05D004499 5.0e-91 339.3 526 46.6
Lalb_Chr07g0182721 Lupinus albus HOM05D003929 ORTHO05D004499 8.6e-91 338.6 493 46.7
Actinidia33066 Actinidia chinensis HOM05D003929 ORTHO05D004499 2.1e-89 334.0 427 52.9
Atru.chr11.2035 Acer truncatum HOM05D003929 ORTHO05D004499 3.6e-89 333.2 441 46.7
Ciclev10024320m.g Citrus clementina HOM05D003929 ORTHO05D004499 4.7e-89 332.8 398 55.0
Ah.11g051630 Amaranthus hybridus HOM05D003618 ORTHO05D004302 8.0e-89 332.0 514 43.8
ATR0730G040 Amborella trichopoda HOM05D003929 ORTHO05D004499 1.2e-87 328.2 488 47.7
COL.COLO4_30035 Corchorus olitorius HOM05D003929 ORTHO05D004499 9.8e-87 325.1 514 44.2
Sc04g0001820 Simmondsia chinensis HOM05D003929 ORTHO05D004499 9.8e-87 325.1 370 57.3
Hma1.2p1_0000F.1_g000890 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 2.2e-86 323.9 463 46.2
PGR044G0511 Punica granatum HOM05D003929 ORTHO05D004499 2.2e-86 323.9 501 44.3
Sopen03g033430 Solanum pennellii HOM05D003929 ORTHO05D004499 2.2e-86 323.9 482 47.9
Psat4g057880 Pisum sativum HOM05D003929 ORTHO05D004499 2.8e-86 323.6 363 52.3
Migut.D01928 Erythranthe guttata HOM05D003929 ORTHO05D004499 5.6e-82 309.3 454 48.5
HPP92_021833 Vanilla planifolia HOM05D003929 ORTHO05D004499 7.3e-82 308.9 395 51.4
AUR62008214 Chenopodium quinoa HOM05D003929 ORTHO05D004499 2.3e-80 303.9 489 42.7
arahy.Tifrunner.gnm1.ann1.W2DQVT Arachis hypogaea HOM05D003929 ORTHO05D004499 2.9e-78 297.0 551 41.6
Sed0009068 Sechium edule HOM05D003929 ORTHO05D004499 6.4e-78 295.8 371 52.8
SEGI_11105 Sequoiadendron giganteum HOM05D003929 ORTHO05D004499 2.4e-77 293.9 584 39.4
Nitab4.5_0000003g0590 Nicotiana tabacum HOM05D003929 ORTHO05D004499 4.1e-77 293.1 493 41.4
Thecc.02G250700 Theobroma cacao HOM05D003929 ORTHO05D004499 1.6e-68 264.6 380 44.2
COL.COLO4_24172 Corchorus olitorius HOM05D003929 ORTHO05D004499 5.8e-63 246.1 391 44.0
Oeu024692.2 Olea europaea HOM05D003929 ORTHO05D004499 7.5e-63 245.7 280 59.3
unitig_749.g13474 Utricularia gibba HOM05D003929 ORTHO05D004499 7.5e-63 245.7 373 42.1
Gohir.A03G139300 Gossypium hirsutum HOM05D003929 ORTHO05D004499 3.2e-61 240.4 377 42.4
CSS0023375 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 7.8e-60 235.7 237 62.9
Gohir.D02G162200 Gossypium hirsutum HOM05D003929 ORTHO05D004499 1.9e-58 231.1 380 42.1
Gorai.005G182200 Gossypium raimondii HOM05D003929 ORTHO05D004499 1.6e-57 228.0 380 41.8
Oeu022163.1 Olea europaea HOM05D003929 ORTHO05D004499 3.5e-52 210.3 273 48.7
Lj9A449T48 Lonicera japonica HOM05D003929 ORTHO05D004499 1.5e-50 204.9 224 54.5
Zm00001eb267680 Zea mays HOM05D003929 ORTHO05D004499 2.1e-49 201.1 466 35.4
Zm00001eb356320 Zea mays HOM05D003929 ORTHO05D004499 8.1e-49 199.1 435 37.0
Psat4g209200 Pisum sativum HOM05D003929 ORTHO05D004499 4.9e-46 189.9 295 44.4
Cfa019127 Carpinus fangiana HOM05D003929 ORTHO05D004499 3.6e-41 173.7 167 59.9
Mapoly0102s0017 Marchantia polymorpha HOM05D003929 ORTHO05D004499 4.0e-40 170.2 472 34.7
Os05g0101200 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 4.0e-40 170.2 457 33.3
Hund02741 Selenicereus undatus HOM05D003929 ORTHO05D004499 2.2e-38 164.5 451 33.5
PSO135G0191 Papaver somniferum HOM05D003929 ORTHO05D004499 1.0e-35 155.6 210 51.9
Zm00001eb126680 Zea mays HOM05D003929 ORTHO05D004499 9.6e-34 149.1 418 33.0
Os01g0107000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 1.0e-30 139.0 200 42.0
Pp3c15_21860 Physcomitrium patens HOM05D003929 ORTHO05D004499 6.5e-30 136.3 317 36.3
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 1.2e-28 132.1 188 52.1
arahy.Tifrunner.gnm1.ann1.49JIZL Arachis hypogaea HOM05D003929 ORTHO05D004499 7.9e-28 129.4 224 41.5
PGR044G1312 Punica granatum HOM05D003929 ORTHO05D004499 1.3e-27 128.6 180 45.0
FAN24G3310 Fragaria x ananassa HOM05D003929 ORTHO05D004499 3.9e-27 127.1 257 39.7
Pp3c9_20380 Physcomitrium patens HOM05D003929 ORTHO05D004499 1.6e-25 121.7 342 33.3
CBR_g3508 Chara braunii HOM05D003929 ORTHO05D004499 5.3e-24 116.7 404 31.7
PGSC0003DMG400024502 Solanum tuberosum HOM05D003929 ORTHO05D004499 3.4e-23 114.0 106 67.9
AagrBONN_evm.TU.Sc2ySwM_117.2261 Anthoceros agrestis HOM05D003929 ORTHO05D004499 5.0e-22 110.2 153 43.8
Actinidia19319 Actinidia chinensis HOM05D003618 ORTHO05D004302 1.9e-21 108.2 206 47.1
Lj9A449G50 Lonicera japonica HOM05D003929 ORTHO05D004499 7.9e-20 102.8 125 52.0
Nitab4.5_0000866g0190 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.0e-19 102.4 120 53.3
SHI17029 Sapria himalayana HOM05D003929 ORTHO05D004499 1.3e-17 95.5 144 44.4
SHI17030 Sapria himalayana HOM05D003929 ORTHO05D004499 1.3e-17 95.5 107 49.5
ClCG01G013120 Citrullus lanatus HOM05D003929 ORTHO05D004499 3.8e-14 84.0 115 43.5
CBR_g10793 Chara braunii HOM05D027206 ORTHO05D004499 2.7e-12 77.8 67 62.7
CBR_g3506 Chara braunii HOM05D003929 ORTHO05D004499 2.0e-10 71.6 73 49.3
MCO04G191 Micromonas commoda HOM05D003929 ORTHO05D004499 9.7e-10 69.3 53 60.4
Cre10.g454025 Chlamydomonas reinhardtii HOM05D003929 ORTHO05D004499 3.7e-09 67.4 167 35.3
Os05g0578000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 6.3e-09 66.6 110 41.8
Zm00001eb296750 Zea mays HOM05D003929 ORTHO05D004499 9.1e-08 62.8 117 38.5


User provided reference genes

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