Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02888 Aquilegia oxysepala HOM05D006234 ORTHO05D007813 2.2e-138 495.7 268 100.0
Gohir.A12G274800 Gossypium hirsutum HOM05D006234 ORTHO05D007813 5.8e-91 338.2 242 76.0
Gohir.D12G275500 Gossypium hirsutum HOM05D006234 ORTHO05D007813 5.8e-91 338.2 242 76.0
Gorai.008G296000 Gossypium raimondii HOM05D006234 ORTHO05D007813 5.8e-91 338.2 242 76.0
GSVIVG01007727001 Vitis vinifera HOM05D006234 ORTHO05D007813 7.6e-91 337.8 236 77.5
Rhsim12G0165600 Rhododendron simsii HOM05D006234 ORTHO05D007813 4.9e-90 335.1 240 77.5
COL.COLO4_30066 Corchorus olitorius HOM05D006234 ORTHO05D007813 1.4e-89 333.6 247 69.2
CSS0048541 Camellia sinensis var. sinensis HOM05D006234 ORTHO05D007813 4.2e-89 332.0 242 73.6
CSS0047520 Camellia sinensis var. sinensis HOM05D006234 ORTHO05D007813 7.1e-89 331.3 242 73.6
Hma1.2p1_0592F.1_g185420 Hydrangea macrophylla HOM05D006234 ORTHO05D007813 9.3e-89 330.9 243 71.2
Atru.chr9.2492 Acer truncatum HOM05D006234 ORTHO05D007813 3.5e-88 328.9 211 76.3
Manes.14G064600 Manihot esculenta HOM05D006234 ORTHO05D007813 3.5e-88 328.9 251 72.9
Lj9A446T64 Lonicera japonica HOM05D006234 ORTHO05D007813 4.6e-88 328.6 239 76.2
Sc10g0010120 Simmondsia chinensis HOM05D006234 ORTHO05D007813 4.6e-88 328.6 210 76.2
Nitab4.5_0000025g0560 Nicotiana tabacum HOM05D006234 ORTHO05D007813 7.8e-88 327.8 238 72.7
arahy.Tifrunner.gnm1.ann1.ZL3RZ2 Arachis hypogaea HOM05D006234 ORTHO05D007813 3.0e-87 325.9 237 75.9
arahy.Tifrunner.gnm1.ann1.I5PLYK Arachis hypogaea HOM05D006234 ORTHO05D007813 3.9e-87 325.5 237 76.4
Lj4g0025683 Lotus japonicus HOM05D006234 ORTHO05D007813 8.7e-87 324.3 248 71.8
Nn4g22716 Nelumbo nucifera HOM05D006234 ORTHO05D007813 8.7e-87 324.3 235 74.9
AUR62030948 Chenopodium quinoa HOM05D006234 ORTHO05D007813 1.5e-86 323.6 243 69.5
Glyma.17G088400 Glycine max HOM05D006234 ORTHO05D007813 2.5e-86 322.8 246 67.5
Potri.015G078100 Populus trichocarpa HOM05D006234 ORTHO05D007813 2.5e-86 322.8 243 74.1
Thecc.03G014200 Theobroma cacao HOM05D006234 ORTHO05D007813 2.5e-86 322.8 246 73.2
CANSAT80G1835 Cannabis sativa HOM05D006234 ORTHO05D007813 5.6e-86 321.6 211 81.5
Potri.012G082300 Populus trichocarpa HOM05D006234 ORTHO05D007813 5.6e-86 321.6 239 74.9
Eucgr.K02833 Eucalyptus grandis HOM05D006234 ORTHO05D007813 1.3e-85 320.5 272 62.5
Oeu020907.1 Olea europaea HOM05D006234 ORTHO05D007813 1.3e-85 320.5 250 74.0
Sopen12g011710 Solanum pennellii HOM05D006234 ORTHO05D007813 1.3e-85 320.5 241 68.0
EL10Ac5g10733 Beta vulgaris HOM05D006234 ORTHO05D007813 2.1e-85 319.7 247 68.0
Ciclev10021475m.g Citrus clementina HOM05D006234 ORTHO05D007813 4.8e-85 318.5 238 68.1
Nitab4.5_0001514g0060 Nicotiana tabacum HOM05D006234 ORTHO05D007813 6.2e-85 318.2 234 74.4
Hund09446 Selenicereus undatus HOM05D006234 ORTHO05D007813 8.1e-85 317.8 267 63.7
Ah.02g110560 Amaranthus hybridus HOM05D006234 ORTHO05D007813 1.8e-84 316.6 207 81.6
FAN08G0279 Fragaria x ananassa HOM05D006234 ORTHO05D007813 1.8e-84 316.6 247 68.0
Glyma.05G038600 Glycine max HOM05D006234 ORTHO05D007813 1.8e-84 316.6 232 69.4
vmacro16618 Vaccinium macrocarpon HOM05D006234 ORTHO05D007813 1.8e-84 316.6 237 68.8
PSO063G7211 Papaver somniferum HOM05D006234 ORTHO05D007813 3.1e-84 315.8 218 76.1
Medtr4g105610 Medicago truncatula HOM05D006234 ORTHO05D007813 4.0e-84 315.5 231 69.3
Cfa019148 Carpinus fangiana HOM05D006234 ORTHO05D007813 5.3e-84 315.1 241 75.1
PGR044G0892 Punica granatum HOM05D006234 ORTHO05D007813 5.3e-84 315.1 248 71.0
Sabra12G0058900 Salix brachista HOM05D006234 ORTHO05D007813 5.3e-84 315.1 241 73.0
Sed0024030 Sechium edule HOM05D006234 ORTHO05D007813 5.3e-84 315.1 241 72.2
Lalb_Chr13g0297731 Lupinus albus HOM05D006234 ORTHO05D007813 6.9e-84 314.7 238 68.9
CiPaw.12G027800 Carya illinoinensis HOM05D006234 ORTHO05D007813 9.0e-84 314.3 287 64.8
Haze_07514 Corylus avellana HOM05D006234 ORTHO05D007813 9.0e-84 314.3 241 74.7
PSO832G4587 Papaver somniferum HOM05D006234 ORTHO05D007813 9.0e-84 314.3 218 75.7
TPR.G37565 Trifolium pratense HOM05D006234 ORTHO05D007813 1.2e-83 313.9 211 73.5
FAN04G0097 Fragaria x ananassa HOM05D006234 ORTHO05D007813 2.6e-83 312.8 234 75.6
MELO3C002271.2 Cucumis melo HOM05D006234 ORTHO05D007813 3.4e-83 312.4 241 72.2
QL10p010716 Quercus lobata HOM05D006234 ORTHO05D007813 3.4e-83 312.4 210 81.9
FvH4_5g05440 Fragaria vesca HOM05D006234 ORTHO05D007813 5.8e-83 311.6 233 75.5
FAN18G0739 Fragaria x ananassa HOM05D006234 ORTHO05D007813 5.8e-83 311.6 233 75.5
RcHm_v2.0_Chr7g0193391 Rosa chinensis HOM05D006234 ORTHO05D007813 5.8e-83 311.6 247 72.9
CsaV3_1G008570 Cucumis sativus L. HOM05D006234 ORTHO05D007813 7.6e-83 311.2 241 71.8
Peaxi162Scf00255g01121 Petunia axillaris HOM05D006234 ORTHO05D007813 7.6e-83 311.2 238 68.1
Phvul.003G201500 Phaseolus vulgaris HOM05D006234 ORTHO05D007813 7.6e-83 311.2 254 68.9
unitig_60.g25412 Utricularia gibba HOM05D006234 ORTHO05D007813 1.3e-82 310.5 254 71.3
QL10p011029 Quercus lobata HOM05D006234 ORTHO05D007813 1.7e-82 310.1 210 81.4
FAN18G3270 Fragaria x ananassa HOM05D006234 ORTHO05D007813 4.9e-82 308.5 233 75.1
Lsat_1_v5_gn_5_15020 Lactuca sativa HOM05D006234 ORTHO05D007813 4.9e-82 308.5 245 70.6
MD14G1178600 Malus domestica HOM05D006234 ORTHO05D007813 1.4e-81 307.0 245 70.2
MD06G1172700 Malus domestica HOM05D006234 ORTHO05D007813 7.1e-81 304.7 255 69.0
Hund02751 Selenicereus undatus HOM05D006234 ORTHO05D007813 7.1e-81 304.7 238 66.0
Migut.O00096 Erythranthe guttata HOM05D006234 ORTHO05D007813 1.6e-80 303.5 236 73.7
Cc04_g12080 Coffea canephora HOM05D006234 ORTHO05D007813 2.1e-80 303.1 245 71.4
Zm00001eb345780 Zea mays HOM05D006234 ORTHO05D007813 2.1e-80 303.1 212 68.4
SalBow5G5218 Salvia bowleyana HOM05D006234 ORTHO05D007813 4.6e-80 302.0 211 72.5
THA.LOC104809262 Tarenaya hassleriana HOM05D006234 ORTHO05D007813 4.6e-80 302.0 258 60.9
PGSC0003DMG401026661 Solanum tuberosum HOM05D006234 ORTHO05D007813 6.0e-80 301.6 270 62.2
Sabra15G0102700 Salix brachista HOM05D006234 ORTHO05D007813 1.8e-79 300.1 257 68.5
SGA_v2.0_scaffold90G27902 Striga asiatica HOM05D006234 ORTHO05D007813 2.3e-79 299.7 237 67.9
MSTRG.9679 Avicennia marina HOM05D006234 ORTHO05D007813 1.1e-78 297.4 239 72.0
FAN13G1809 Fragaria x ananassa HOM05D006234 ORTHO05D007813 5.6e-78 295.0 195 75.4
TAR629G2947 Trochodendron aralioides HOM05D006234 ORTHO05D007813 1.6e-77 293.5 260 66.2
HanXRQChr05g0155761 Helianthus annuus HOM05D006234 ORTHO05D007813 2.1e-77 293.1 240 70.0
ClCG01G013210 Citrullus lanatus HOM05D006234 ORTHO05D007813 2.8e-77 292.7 240 65.0
TAR622G1324 Trochodendron aralioides HOM05D006234 ORTHO05D007813 1.8e-76 290.0 226 75.2
HPP92_001303 Vanilla planifolia HOM05D006234 ORTHO05D007813 2.4e-76 289.7 211 66.8
Lj1g0005957 Lotus japonicus HOM05D006234 ORTHO05D007813 4.5e-75 285.4 239 65.7
SGA_v2.0_scaffold114G31825 Striga asiatica HOM05D006234 ORTHO05D007813 5.8e-75 285.0 271 57.6
Os05g0170800 Oryza sativa ssp. japonica HOM05D006234 ORTHO05D007813 2.9e-74 282.7 211 68.2
Glyma.04G184400 Glycine max HOM05D006234 ORTHO05D007813 6.4e-74 281.6 256 62.1
Duzib205G1984 Durio zibethinus HOM05D006234 ORTHO05D007813 1.9e-73 280.0 242 61.6
Glyma.06G181500 Glycine max HOM05D006234 ORTHO05D007813 4.2e-73 278.9 236 66.5
MBI10_g27998_MAGBIO Magnolia biondii HOM05D006234 ORTHO05D007813 7.1e-73 278.1 243 63.8
SalBow6G2400 Salvia bowleyana HOM05D006234 ORTHO05D007813 1.2e-72 277.3 235 69.8
VMungo1215G2331 Vigna mungo HOM05D006234 ORTHO05D007813 1.2e-72 277.3 222 65.8
VMungo1309G2926 Vigna mungo HOM05D006234 ORTHO05D007813 1.2e-72 277.3 228 60.1
arahy.Tifrunner.gnm1.ann1.HN9NVD Arachis hypogaea HOM05D006234 ORTHO05D007813 1.8e-71 273.5 241 58.1
ECA246G1070 Erigeron canadensis HOM05D006234 ORTHO05D007813 2.3e-71 273.1 210 71.9
Nn3g16823 Nelumbo nucifera HOM05D006234 ORTHO05D007813 3.9e-71 272.3 259 56.8
SalBow6G3516 Salvia bowleyana HOM05D006234 ORTHO05D007813 8.7e-71 271.2 186 72.6
Manes.06G106000 Manihot esculenta HOM05D006234 ORTHO05D007813 4.3e-70 268.9 214 73.4
CAN.G263.4 Capsicum annuum HOM05D006234 ORTHO05D007813 1.3e-69 267.3 236 61.0
Zm00001eb124590 Zea mays HOM05D006234 ORTHO05D007813 3.7e-69 265.8 213 64.3
AUR62008196 Chenopodium quinoa HOM05D006234 ORTHO05D007813 4.8e-69 265.4 243 61.3
SEGI_35494 Sequoiadendron giganteum HOM05D006234 ORTHO05D007813 1.8e-68 263.5 210 62.9
Phvul.009G177500 Phaseolus vulgaris HOM05D006234 ORTHO05D007813 3.1e-68 262.7 257 54.5
CDE04G1656 Ceratophyllum demersum HOM05D006234 ORTHO05D007813 9.0e-68 261.2 235 64.3
HanXRQChr05g0132691 Helianthus annuus HOM05D006234 ORTHO05D007813 1.7e-66 256.9 205 63.4
Cpa.g.sc685.2 Carica papaya HOM05D006234 ORTHO05D007813 2.7e-64 249.6 138 83.3
arahy.Tifrunner.gnm1.ann1.68I129 Arachis hypogaea HOM05D006234 ORTHO05D007813 5.1e-63 245.4 241 55.2
Dinv38575 Davidia involucrata HOM05D006234 ORTHO05D007813 2.9e-58 229.6 181 73.5
Actinidia19103 Actinidia chinensis HOM05D006234 ORTHO05D007813 1.4e-52 210.7 116 85.3
Aqoxy6G01962 Aquilegia oxysepala HOM05D006234 ORTHO05D007813 1.7e-50 203.8 134 79.9
Prupe.5G172000 Prunus persica HOM05D006234 ORTHO05D007813 6.1e-48 195.3 178 67.4
Pp3c21_1540 Physcomitrium patens HOM05D006234 ORTHO05D007813 7.9e-48 194.9 202 55.0
SalBow1G2571 Salvia bowleyana HOM05D006234 ORTHO05D007813 3.0e-39 166.4 178 53.4
MCO05G167 Micromonas commoda HOM05D006234 ORTHO05D007813 1.8e-31 140.6 178 45.5
Cre16.g650500 Chlamydomonas reinhardtii HOM05D006234 ORTHO05D007813 3.1e-28 129.8 204 45.6
Psat5g000720 Pisum sativum HOM05D006234 ORTHO05D007813 2.9e-26 123.2 127 55.9
Ca_21933_v3 Cicer arietinum L. HOM05D000957 ORTHO05D000754 4.2e-25 119.4 118 58.5
SalBow8G5646 Salvia bowleyana HOM05D006234 ORTHO05D007813 2.7e-24 116.7 179 41.9
Solyc12g021360.3 Solanum lycopersicum HOM05D006234 ORTHO05D007813 6.8e-23 112.1 135 49.6
DCAR_026145 Daucus carota HOM05D007767 ORTHO05D010057 1.1e-20 104.8 131 58.8
Lalb_Chr08g0236591 Lupinus albus HOM05D006234 ORTHO05D007813 9.1e-20 101.7 63 73.0
ATR1091G013 Amborella trichopoda HOM05D006234 ORTHO05D007813 2.0e-19 100.5 111 52.3
Cre09.g387134 Chlamydomonas reinhardtii HOM05D006234 ORTHO05D007813 2.5e-17 93.6 139 38.8
PRCOL_00003688 Prasinoderma coloniale HOM05D001043 ORTHO05D006432 8.0e-16 88.6 107 43.9
SalBow1G3204 Salvia bowleyana HOM05D006234 ORTHO05D007813 2.3e-15 87.0 73 60.3
Lalb_Chr08g0236581 Lupinus albus HOM05D006234 ORTHO05D007813 4.0e-15 86.3 82 56.1
Actinidia19102 Actinidia chinensis HOM05D006234 ORTHO05D007813 9.8e-14 81.6 71 66.2
arahy.Tifrunner.gnm1.ann1.AH97YV Arachis hypogaea HOM05D006234 ORTHO05D007813 4.1e-12 76.3 55 65.5
Manes.11G123700 Manihot esculenta HOM05D001043 ORTHO05D006432 3.5e-11 73.2 139 36.7
CSS0043871 Camellia sinensis var. sinensis HOM05D001043 ORTHO05D006432 1.5e-09 67.8 148 34.5
Glyma.12G051100 Glycine max HOM05D001043 ORTHO05D006432 3.3e-09 66.6 139 35.3
SMO203G0209 Selaginella moellendorffii HOM05D001043 ORTHO05D006432 3.3e-09 66.6 133 30.1
CSS0016711 Camellia sinensis var. sinensis HOM05D001043 ORTHO05D006432 7.3e-09 65.5 161 32.3
Thecc.04G175400 Theobroma cacao HOM05D001043 ORTHO05D006432 1.2e-08 64.7 137 35.0
ECA240G3866 Erigeron canadensis HOM05D001043 ORTHO05D006432 1.6e-08 64.3 139 33.8
HanXRQChr03g0092911 Helianthus annuus HOM05D001043 ORTHO05D006432 2.8e-08 63.5 137 33.6
Atru.chr4.1261 Acer truncatum HOM05D001043 ORTHO05D006432 4.7e-08 62.8 141 33.3
TAR636G2727 Trochodendron aralioides HOM05D001043 ORTHO05D006432 1.0e-07 61.6 148 35.8
PGR142G3303 Punica granatum HOM05D001043 ORTHO05D006432 1.4e-07 61.2 137 32.8
Lalb_Chr01g0003101 Lupinus albus HOM05D001043 ORTHO05D006432 1.8e-07 60.8 139 33.1
Medtr4g068130 Medicago truncatula HOM05D001043 ORTHO05D006432 1.8e-07 60.8 139 32.4
PGR142G0751 Punica granatum HOM05D001043 ORTHO05D006432 2.3e-07 60.5 143 34.3
SGA_v2.0_scaffold12G06170 Striga asiatica HOM05D001043 ORTHO05D006432 2.3e-07 60.5 141 30.5
AUR62023842 Chenopodium quinoa HOM05D001043 ORTHO05D006432 3.1e-07 60.1 135 30.4
FAN07G1629 Fragaria x ananassa HOM05D001043 ORTHO05D006432 5.2e-07 59.3 116 31.9
Gohir.A02G011600 Gossypium hirsutum HOM05D001043 ORTHO05D006432 5.2e-07 59.3 135 33.3
Gorai.005G015800 Gossypium raimondii HOM05D001043 ORTHO05D006432 5.2e-07 59.3 135 32.6
Gohir.D02G012400 Gossypium hirsutum HOM05D001043 ORTHO05D006432 6.8e-07 58.9 135 32.6
Hund12412 Selenicereus undatus HOM05D001043 ORTHO05D006432 6.8e-07 58.9 137 29.9
CiPaw.02G052200 Carya illinoinensis HOM05D001043 ORTHO05D006432 1.2e-06 58.2 139 31.7
RcHm_v2.0_Chr6g0279701 Rosa chinensis HOM05D006234 ORTHO05D007813 1.5e-06 57.8 53 56.6
VMungo1127G0978 Vigna mungo HOM05D001043 ORTHO05D006432 2.6e-06 57.0 112 35.7
CiPaw.01G096300 Carya illinoinensis HOM05D001043 ORTHO05D006432 5.8e-06 55.8 101 36.6
AUR62002348 Chenopodium quinoa HOM05D001043 ORTHO05D006432 5.8e-06 55.8 135 30.4


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