Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02809 Aquilegia oxysepala HOM05D002866 ORTHO05D008706 2.0e-214 748.8 384 100.0
TAR636G1476 Trochodendron aralioides HOM05D002866 ORTHO05D008706 1.0e-165 587.0 384 78.6
TAR629G0107 Trochodendron aralioides HOM05D002866 ORTHO05D008706 9.6e-164 580.5 377 76.7
QL09p028565 Quercus lobata HOM05D002866 ORTHO05D008706 2.7e-158 562.4 383 74.9
Nn6g33864 Nelumbo nucifera HOM05D002866 ORTHO05D008706 3.1e-154 548.9 384 72.9
RcHm_v2.0_Chr1g0373901 Rosa chinensis HOM05D002866 ORTHO05D008706 1.3e-152 543.5 384 73.2
CiPaw.07G185900 Carya illinoinensis HOM05D002866 ORTHO05D008706 1.9e-151 539.7 385 72.7
Potri.004G233400 Populus trichocarpa HOM05D002866 ORTHO05D008706 4.2e-151 538.5 384 72.7
TWI39G0340 Tripterygium wilfordii HOM05D002866 ORTHO05D008706 4.2e-151 538.5 382 71.2
Atru.chr1.857 Acer truncatum HOM05D002866 ORTHO05D008706 1.6e-150 536.6 384 71.9
Cfa013555 Carpinus fangiana HOM05D002866 ORTHO05D008706 1.6e-150 536.6 384 71.6
CSS0049284 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 2.7e-150 535.8 385 73.0
CSS0019630 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008706 3.5e-150 535.4 386 72.8
Gohir.D12G199800 Gossypium hirsutum HOM05D002866 ORTHO05D008706 4.6e-150 535.0 384 71.4
Gohir.A12G197200 Gossypium hirsutum HOM05D002866 ORTHO05D008706 2.3e-149 532.7 384 71.1
Dinv16857 Davidia involucrata HOM05D002866 ORTHO05D000096 8.7e-149 530.8 384 71.6
PSO063G2361 Papaver somniferum HOM05D002866 ORTHO05D008706 8.7e-149 530.8 388 71.4
Eucgr.K00134 Eucalyptus grandis HOM05D002866 ORTHO05D008706 1.1e-148 530.4 377 73.5
Thecc.03G150500 Theobroma cacao HOM05D002866 ORTHO05D008706 1.9e-148 529.6 382 70.9
CiPaw.08G040800 Carya illinoinensis HOM05D002866 ORTHO05D008706 2.5e-148 529.3 394 71.8
Duzib205G1859 Durio zibethinus HOM05D002866 ORTHO05D008706 3.3e-148 528.9 384 71.1
COL.COLO4_14065 Corchorus olitorius HOM05D002866 ORTHO05D008706 9.7e-148 527.3 384 70.1
Lalb_Chr01g0008171 Lupinus albus HOM05D002866 ORTHO05D008706 2.2e-147 526.2 385 69.9
FvH4_7g27080 Fragaria vesca HOM05D002866 ORTHO05D008706 1.1e-146 523.9 384 70.3
MBI04_g34101_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008706 1.8e-146 523.1 387 69.0
CANSAT56G0863 Cannabis sativa HOM05D002866 ORTHO05D008706 5.3e-146 521.5 384 70.1
Gorai.008G215000 Gossypium raimondii HOM05D002866 ORTHO05D008706 1.5e-145 520.0 412 66.5
Lalb_Chr03g0033851 Lupinus albus HOM05D002866 ORTHO05D008706 3.4e-145 518.8 385 68.3
FAN06G0893 Fragaria x ananassa HOM05D002866 ORTHO05D008706 4.5e-145 518.5 396 68.7
arahy.Tifrunner.gnm1.ann1.J95VX3 Arachis hypogaea HOM05D002866 ORTHO05D008706 7.7e-145 517.7 408 65.4
Oeu021695.1 Olea europaea HOM05D002866 ORTHO05D008706 1.0e-144 517.3 384 68.8
MD07G1250400 Malus domestica HOM05D002866 ORTHO05D008706 1.7e-144 516.5 384 68.8
Haze_22176 Corylus avellana HOM05D002866 ORTHO05D008706 2.2e-144 516.2 384 70.3
MD01G1178200 Malus domestica HOM05D002866 ORTHO05D008706 2.9e-144 515.8 379 69.7
CsaV3_4G004120 Cucumis sativus L. HOM05D002866 ORTHO05D008706 5.0e-144 515.0 385 68.3
Sed0026429 Sechium edule HOM05D002866 ORTHO05D008706 6.5e-144 514.6 385 68.3
Glyma.12G241300 Glycine max HOM05D002866 ORTHO05D008706 8.5e-144 514.2 385 68.6
MELO3C017654.2 Cucumis melo HOM05D002866 ORTHO05D008706 1.4e-143 513.5 385 67.8
arahy.Tifrunner.gnm1.ann1.E5894Z Arachis hypogaea HOM05D002866 ORTHO05D008706 1.9e-143 513.1 414 64.5
Cc02_g04580 Coffea canephora HOM05D002866 ORTHO05D008706 2.5e-143 512.7 383 69.5
FAN10G3812 Fragaria x ananassa HOM05D002866 ORTHO05D008706 3.2e-143 512.3 384 69.8
HanXRQChr05g0139511 Helianthus annuus HOM05D002866 ORTHO05D008706 7.9e-142 507.7 385 69.4
VMungo1127G0600 Vigna mungo HOM05D002866 ORTHO05D008706 7.9e-142 507.7 385 67.5
ClCG07G016890 Citrullus lanatus HOM05D002866 ORTHO05D008706 1.0e-141 507.3 404 65.6
MSTRG.135 Avicennia marina HOM05D002866 ORTHO05D008706 3.0e-141 505.8 384 67.4
Nitab4.5_0002346g0030 Nicotiana tabacum HOM05D002866 ORTHO05D008706 3.0e-141 505.8 384 67.7
Ciclev10005197m.g Citrus clementina HOM05D002866 ORTHO05D008706 8.8e-141 504.2 384 68.0
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 1.1e-140 503.8 367 71.4
Lsat_1_v5_gn_8_9940 Lactuca sativa HOM05D002866 ORTHO05D008706 1.5e-140 503.4 384 68.5
Manes.06G132500 Manihot esculenta HOM05D002866 ORTHO05D008706 1.5e-140 503.4 390 67.9
Ca_19791_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008706 2.0e-140 503.1 384 66.7
Lj3g0011743 Lotus japonicus HOM05D002866 ORTHO05D008706 2.0e-140 503.1 385 67.8
Glyma.09G001400 Glycine max HOM05D002866 ORTHO05D008706 3.3e-140 502.3 385 67.5
vmacro22347 Vaccinium macrocarpon HOM05D002866 ORTHO05D008706 3.3e-140 502.3 382 68.3
Migut.F00510 Erythranthe guttata HOM05D002866 ORTHO05D008706 5.7e-140 501.5 382 67.0
Solyc03g093430.3 Solanum lycopersicum HOM05D002866 ORTHO05D008706 7.4e-140 501.1 384 67.7
PGSC0003DMG400018852 Solanum tuberosum HOM05D002866 ORTHO05D008706 9.7e-140 500.7 384 67.2
Rhsim03G0163000 Rhododendron simsii HOM05D002866 ORTHO05D008706 1.7e-139 500.0 437 62.0
TPR.G4977 Trifolium pratense HOM05D002866 ORTHO05D008706 3.7e-139 498.8 384 66.7
Sabra01G0178500 Salix brachista HOM05D002866 ORTHO05D008706 4.8e-139 498.4 439 62.4
Psat7g229240 Pisum sativum HOM05D002866 ORTHO05D008706 1.8e-138 496.5 384 65.1
CAN.G485.11 Capsicum annuum HOM05D002866 ORTHO05D008706 4.1e-138 495.4 385 66.2
SGA_v2.0_scaffold60G20804 Striga asiatica HOM05D006112 ORTHO05D000096 9.1e-138 494.2 409 64.5
Peaxi162Scf00271g00837 Petunia axillaris HOM05D002866 ORTHO05D008706 2.6e-137 492.7 384 67.2
Medtr4g029530 Medicago truncatula HOM05D002866 ORTHO05D008706 4.5e-137 491.9 384 64.3
THA.LOC104819416 Tarenaya hassleriana HOM05D002866 ORTHO05D008706 1.0e-136 490.7 384 66.4
FAN01G3021 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.7e-136 490.0 417 64.0
Lj1A977T67 Lonicera japonica HOM05D002866 ORTHO05D008706 3.2e-135 485.7 437 62.2
Cpa.g.sc13.273 Carica papaya HOM05D002866 ORTHO05D008706 1.2e-134 483.8 361 70.4
PGR142G0955 Punica granatum HOM05D002866 ORTHO05D008706 2.7e-134 482.6 384 66.7
AL8G38230 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 7.9e-134 481.1 384 65.9
Sp2g24730 Schrenkiella parvula HOM05D002866 ORTHO05D008706 7.9e-134 481.1 384 64.8
Nitab4.5_0001267g0040 Nicotiana tabacum HOM05D002866 ORTHO05D008706 3.0e-133 479.2 384 65.1
BraA03t13839Z Brassica rapa HOM05D002866 ORTHO05D008706 8.8e-133 477.6 384 64.6
Thhalv10005440m.g Eutrema salsugineum HOM05D002866 ORTHO05D008706 1.1e-132 477.2 384 64.3
FAN06G0035 Fragaria x ananassa HOM05D002866 ORTHO05D008706 2.0e-132 476.5 384 65.4
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 2.6e-132 476.1 382 64.4
EL10Ac3g05867 Beta vulgaris HOM05D002866 ORTHO05D008706 9.7e-132 474.2 385 63.9
unitig_0.g267 Utricularia gibba HOM05D002866 ORTHO05D008706 9.7e-132 474.2 385 64.7
Ah.07g207580 Amaranthus hybridus HOM05D002866 ORTHO05D008706 1.3e-131 473.8 387 63.8
Carub.0008s2222 Capsella rubella HOM05D002866 ORTHO05D008706 4.8e-131 471.9 384 64.1
CARHR275300 Cardamine hirsuta HOM05D002866 ORTHO05D008706 1.1e-130 470.7 384 64.6
A09p07320 Brassica napus HOM05D002866 ORTHO05D008706 1.8e-130 469.9 383 65.0
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 1.8e-130 469.9 380 64.2
BcaNung01432 Brassica carinata HOM05D002866 ORTHO05D008706 3.1e-130 469.2 382 63.6
BraA09t36387Z Brassica rapa HOM05D002866 ORTHO05D008706 9.1e-130 467.6 383 64.8
Prupe.2G274000 Prunus persica HOM05D002866 ORTHO05D008706 1.2e-129 467.2 328 71.3
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 1.3e-128 463.8 385 63.4
BcaC04g23445 Brassica carinata HOM05D002866 ORTHO05D008706 1.7e-128 463.4 383 64.0
FAN03G0071 Fragaria x ananassa HOM05D002866 ORTHO05D008706 1.7e-128 463.4 384 65.4
C09p08260 Brassica napus HOM05D002866 ORTHO05D008706 2.9e-128 462.6 383 63.7
BolC9t53736H Brassica oleracea HOM05D002866 ORTHO05D008706 2.9e-128 462.6 383 63.7
CDE02G3129 Ceratophyllum demersum HOM05D002866 ORTHO05D008706 6.5e-128 461.5 376 62.8
ATR0057G110 Amborella trichopoda HOM05D002866 ORTHO05D008706 1.5e-127 460.3 409 61.9
Os07g0486500 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008706 4.7e-126 455.3 385 63.1
Aa31LG11G1890 Aethionema arabicum HOM05D002866 ORTHO05D008706 8.2e-123 444.5 402 59.5
HPP92_007440 Vanilla planifolia HOM05D002866 ORTHO05D008706 7.0e-122 441.4 389 61.4
Eucgr.A02912 Eucalyptus grandis HOM05D002866 ORTHO05D008706 3.8e-120 435.6 384 59.9
Hund27168 Selenicereus undatus HOM05D002866 ORTHO05D008706 1.5e-119 433.7 464 51.9
Sopen03g024260 Solanum pennellii HOM05D002866 ORTHO05D008706 2.3e-117 426.4 336 66.7
AUR62002232 Chenopodium quinoa HOM05D002866 ORTHO05D008706 5.9e-113 411.8 387 58.4
AUR62015444 Chenopodium quinoa HOM05D002866 ORTHO05D008706 5.9e-113 411.8 387 59.2
Zm00001eb321610 Zea mays HOM05D002866 ORTHO05D008706 8.8e-109 397.9 389 58.1
Actinidia13600 Actinidia chinensis HOM05D000164 ORTHO05D000096 1.2e-105 387.5 281 72.6
AT5G61530 Arabidopsis thaliana HOM05D002866 ORTHO05D008706 3.7e-99 365.9 282 69.5
Zm00001eb105130 Zea mays HOM05D002866 ORTHO05D008706 2.1e-73 280.4 246 61.4
AagrBONN_evm.TU.Sc2ySwM_368.2292 Anthoceros agrestis HOM05D002866 ORTHO05D008706 3.0e-72 276.6 425 40.0
Mapoly0101s0019 Marchantia polymorpha HOM05D002866 ORTHO05D008706 1.1e-66 258.1 455 35.6
AL6G41360 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 8.7e-56 221.9 158 69.0
CBR_g12377 Chara braunii HOM05D002866 ORTHO05D008706 5.6e-55 219.2 342 41.2
AL4G20970 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.1e-54 217.2 158 68.4
AL7G45270 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 2.1e-54 217.2 158 67.7
AL9U10640 Arabidopsis lyrata HOM05D002866 ORTHO05D008706 1.2e-44 184.9 158 58.9
GSVIVG01032279001 Vitis vinifera HOM05D002866 ORTHO05D008706 3.4e-44 183.3 148 62.2
SEGI_37372 Sequoiadendron giganteum HOM05D002866 ORTHO05D008706 5.5e-42 176.0 140 60.7
GSVIVG01032275001 Vitis vinifera HOM05D002866 ORTHO05D008706 7.9e-41 172.2 129 65.1
GSVIVG01005702001 Vitis vinifera HOM05D002866 ORTHO05D008706 4.5e-36 156.4 126 62.7
ECA233G4879 Erigeron canadensis HOM05D000383 ORTHO05D000730 5.5e-34 149.4 102 66.7
Oeu031440.1 Olea europaea HOM05D002866 ORTHO05D008706 1.6e-30 137.9 103 64.1
Oeu017777.1 Olea europaea HOM05D002866 ORTHO05D008706 3.1e-29 133.7 112 65.2
GSVIVG01032273001 Vitis vinifera HOM05D002866 ORTHO05D008706 1.7e-19 101.3 99 57.6
BcaNung07329 Brassica carinata HOM05D002866 ORTHO05D008706 1.9e-18 97.8 91 59.3
SEGI_06793 Sequoiadendron giganteum HOM05D002866 ORTHO05D014815 4.5e-12 76.6 124 38.7
Cfa024407 Carpinus fangiana HOM05D006418 ORTHO05D008063 1.2e-09 68.6 163 33.1
GSVIVG01006058001 Vitis vinifera HOM05D002866 ORTHO05D441252 2.0e-07 61.2 39 82.1
GSVIVG01005989001 Vitis vinifera HOM05D002866 ORTHO05D440186 4.4e-07 60.1 39 79.5
Lsat_1_v5_gn_9_20721 Lactuca sativa HOM05D000892 ORTHO05D000750 8.2e-06 55.8 165 28.5


User provided reference genes

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